RNA–Protein interactions for RNA: ENST00000401813.7

FAAP20-205, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-205ENST00000401813 KRTAP3-3Q9BYR6 98 aa9.88□□□□□ -0.83
FAAP20-205ENST00000401813 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
FAAP20-205ENST00000401813 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
FAAP20-205ENST00000401813 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
FAAP20-205ENST00000401813 A0A0D9SG42 100 aa9.81□□□□□ -0.84
FAAP20-205ENST00000401813 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
FAAP20-205ENST00000401813 KMT2CQ8NEZ4 4911 aaKnown RBP9.76□□□□□ -0.85
FAAP20-205ENST00000401813 P0C880 135 aa9.74□□□□□ -0.85
FAAP20-205ENST00000401813 S4R3F8 94 aa9.73□□□□□ -0.85
FAAP20-205ENST00000401813 KRTAP10-8P60410 259 aa9.72□□□□□ -0.85
FAAP20-205ENST00000401813 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
FAAP20-205ENST00000401813 HSPG2P98160 4391 aa9.71□□□□□ -0.86
FAAP20-205ENST00000401813 DMBT1Q9UGM3 2413 aaPredicted RBP9.7□□□□□ -0.86
FAAP20-205ENST00000401813 TNXBP22105 4242 aa9.69□□□□□ -0.86
FAAP20-205ENST00000401813 LRP1Q07954 4544 aaKnown RBP9.69□□□□□ -0.86
FAAP20-205ENST00000401813 XP32Q5T750 250 aa9.62□□□□□ -0.87
FAAP20-205ENST00000401813 C10orf95Q9H7T3 257 aa9.62□□□□□ -0.87
FAAP20-205ENST00000401813 SPINT4Q6UDR6 99 aa9.59□□□□□ -0.87
FAAP20-205ENST00000401813 KRTAP12-2P59991 146 aa9.56□□□□□ -0.88
FAAP20-205ENST00000401813 Q5VSD8 79 aa9.53□□□□□ -0.88
FAAP20-205ENST00000401813 MYCBP2O75592 4640 aa9.5□□□□□ -0.89
FAAP20-205ENST00000401813 RYR3Q15413 4870 aa9.48□□□□□ -0.89
FAAP20-205ENST00000401813 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
FAAP20-205ENST00000401813 RYR1P21817 5038 aa9.45□□□□□ -0.9
FAAP20-205ENST00000401813 KRTAP15-1Q3LI76 137 aa9.41□□□□□ -0.9
FAAP20-205ENST00000401813 KRTAP17-1Q9BYP8 105 aa9.4□□□□□ -0.9
FAAP20-205ENST00000401813 LPAP08519 4548 aa9.31□□□□□ -0.92
FAAP20-205ENST00000401813 M0QZ58 72 aa9.31□□□□□ -0.92
FAAP20-205ENST00000401813 NDUFAF8A1L188 74 aa9.31□□□□□ -0.92
FAAP20-205ENST00000401813 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
FAAP20-205ENST00000401813 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
FAAP20-205ENST00000401813 LRP2P98164 4655 aa9.17□□□□□ -0.94
FAAP20-205ENST00000401813 A0A0A0MQY5 61 aa9.15□□□□□ -0.94
FAAP20-205ENST00000401813 EPPK1P58107 5090 aaKnown RBP9.13□□□□□ -0.95
FAAP20-205ENST00000401813 R4GN34 69 aa9.04□□□□□ -0.96
FAAP20-205ENST00000401813 KRTAP4-5Q9BYR2 181 aa8.97□□□□□ -0.97
FAAP20-205ENST00000401813 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
FAAP20-205ENST00000401813 ABCA13Q86UQ4 5058 aa8.85□□□□□ -0.99
FAAP20-205ENST00000401813 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
FAAP20-205ENST00000401813 MUC17Q685J3 4493 aa8.83□□□□□ -1
FAAP20-205ENST00000401813 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
FAAP20-205ENST00000401813 LUZP6Q538Z0 58 aa8.74□□□□□ -1.01
FAAP20-205ENST00000401813 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.02
FAAP20-205ENST00000401813 J3QL48 77 aa8.68□□□□□ -1.02
FAAP20-205ENST00000401813 HERC2O95714 4834 aa8.64□□□□□ -1.03
FAAP20-205ENST00000401813 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
FAAP20-205ENST00000401813 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
FAAP20-205ENST00000401813 KRTAP19-2Q3LHN2 52 aa8.58□□□□□ -1.04
FAAP20-205ENST00000401813 BIRC6Q9NR09 4857 aa8.53□□□□□ -1.04
FAAP20-205ENST00000401813 FLGP20930 4061 aaPredicted RBP8.34□□□□□ -1.07
FAAP20-205ENST00000401813 TNP1P09430 55 aa8.33□□□□□ -1.08
FAAP20-205ENST00000401813 MUC2Q02817 5179 aa8.28□□□□□ -1.08
FAAP20-205ENST00000401813 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
FAAP20-205ENST00000401813 HERC1Q15751 4861 aa8.26□□□□□ -1.09
FAAP20-205ENST00000401813 SPRR5A0A1B0GTR4 108 aa8.19□□□□□ -1.1
FAAP20-205ENST00000401813 PCLOQ9Y6V0 5065 aa8.17□□□□□ -1.1
FAAP20-205ENST00000401813 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
FAAP20-205ENST00000401813 SPRR2GQ9BYE4 73 aa7.98□□□□□ -1.13
FAAP20-205ENST00000401813 LCE2CQ5TA81 110 aa7.97□□□□□ -1.13
FAAP20-205ENST00000401813 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
FAAP20-205ENST00000401813 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
FAAP20-205ENST00000401813 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
FAAP20-205ENST00000401813 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
FAAP20-205ENST00000401813 MT1HP80294 61 aa7.76□□□□□ -1.17
FAAP20-205ENST00000401813 M0R2T5 61 aa7.75□□□□□ -1.17
FAAP20-205ENST00000401813 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
FAAP20-205ENST00000401813 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
FAAP20-205ENST00000401813 MT1FP04733 61 aa7.68□□□□□ -1.18
FAAP20-205ENST00000401813 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
FAAP20-205ENST00000401813 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
FAAP20-205ENST00000401813 MT2AP02795 61 aa7.66□□□□□ -1.18
FAAP20-205ENST00000401813 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
FAAP20-205ENST00000401813 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
FAAP20-205ENST00000401813 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
FAAP20-205ENST00000401813 MT1XP80297 61 aa7.51□□□□□ -1.21
FAAP20-205ENST00000401813 MT1BP07438 61 aa7.49□□□□□ -1.21
FAAP20-205ENST00000401813 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
FAAP20-205ENST00000401813 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
FAAP20-205ENST00000401813 INE1O15225 51 aa7.43□□□□□ -1.22
FAAP20-205ENST00000401813 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
FAAP20-205ENST00000401813 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
FAAP20-205ENST00000401813 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
FAAP20-205ENST00000401813 LCE3CQ5T5A8 94 aa7.06□□□□□ -1.28
FAAP20-205ENST00000401813 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
FAAP20-205ENST00000401813 LCE2BO14633 110 aa6.98□□□□□ -1.29
FAAP20-205ENST00000401813 KMT2DO14686 5537 aa6.88□□□□□ -1.31
FAAP20-205ENST00000401813 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
FAAP20-205ENST00000401813 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
FAAP20-205ENST00000401813 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
FAAP20-205ENST00000401813 USH2AO75445 5202 aa6.79□□□□□ -1.32
FAAP20-205ENST00000401813 KRTAP2-3P0C7H8 128 aa6.71□□□□□ -1.34
FAAP20-205ENST00000401813 KRTAP2-4Q9BYR9 128 aa6.71□□□□□ -1.34
FAAP20-205ENST00000401813 KRTAP2-1Q9BYU5 128 aa6.71□□□□□ -1.34
FAAP20-205ENST00000401813 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
FAAP20-205ENST00000401813 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
FAAP20-205ENST00000401813 MT1LQ93083 61 aa6.51□□□□□ -1.37
FAAP20-205ENST00000401813 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
FAAP20-205ENST00000401813 MT1EP04732 61 aa6.47□□□□□ -1.37
FAAP20-205ENST00000401813 SSPOA2VEC9 5147 aa6.45□□□□□ -1.38
FAAP20-205ENST00000401813 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms