RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
SCFD2-202ENST00000401642 HSPG2P98160 4391 aa5.89□□□□□ -1.47
SCFD2-202ENST00000401642 KRTAP21-3Q3LHN1 58 aa5.88□□□□□ -1.47
SCFD2-202ENST00000401642 RYR3Q15413 4870 aa5.87□□□□□ -1.47
SCFD2-202ENST00000401642 NDUFAF8A1L188 74 aa5.85□□□□□ -1.47
SCFD2-202ENST00000401642 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
SCFD2-202ENST00000401642 A0A1B0GU33 70 aa5.83□□□□□ -1.48
SCFD2-202ENST00000401642 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
SCFD2-202ENST00000401642 H0YAA0 97 aa5.81□□□□□ -1.48
SCFD2-202ENST00000401642 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
SCFD2-202ENST00000401642 A0A0D9SG42 100 aa5.79□□□□□ -1.48
SCFD2-202ENST00000401642 KRTAP10-8P60410 259 aa5.78□□□□□ -1.48
SCFD2-202ENST00000401642 TNXBP22105 4242 aa5.77□□□□□ -1.49
SCFD2-202ENST00000401642 RYR1P21817 5038 aa5.77□□□□□ -1.49
SCFD2-202ENST00000401642 LPAP08519 4548 aa5.75□□□□□ -1.49
SCFD2-202ENST00000401642 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
SCFD2-202ENST00000401642 XP32Q5T750 250 aa5.75□□□□□ -1.49
SCFD2-202ENST00000401642 LRP2P98164 4655 aa5.73□□□□□ -1.49
SCFD2-202ENST00000401642 EPPK1P58107 5090 aaKnown RBP5.71□□□□□ -1.5
SCFD2-202ENST00000401642 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
SCFD2-202ENST00000401642 S4R3F8 94 aa5.67□□□□□ -1.5
SCFD2-202ENST00000401642 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
SCFD2-202ENST00000401642 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
SCFD2-202ENST00000401642 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
SCFD2-202ENST00000401642 K7ERS5 55 aa5.63□□□□□ -1.51
SCFD2-202ENST00000401642 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
SCFD2-202ENST00000401642 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
SCFD2-202ENST00000401642 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
SCFD2-202ENST00000401642 C10orf95Q9H7T3 257 aa5.61□□□□□ -1.51
SCFD2-202ENST00000401642 KRTAP10-6P60371 365 aaPredicted RBP5.59□□□□□ -1.52
SCFD2-202ENST00000401642 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
SCFD2-202ENST00000401642 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
SCFD2-202ENST00000401642 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
SCFD2-202ENST00000401642 J3QL48 77 aa5.49□□□□□ -1.53
SCFD2-202ENST00000401642 MUC2Q02817 5179 aa5.47□□□□□ -1.53
SCFD2-202ENST00000401642 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
SCFD2-202ENST00000401642 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
SCFD2-202ENST00000401642 HERC2O95714 4834 aa5.4□□□□□ -1.55
SCFD2-202ENST00000401642 M0QZ58 72 aa5.38□□□□□ -1.55
SCFD2-202ENST00000401642 R4GN34 69 aa5.34□□□□□ -1.56
SCFD2-202ENST00000401642 KRTAP12-1P59990 96 aa5.33□□□□□ -1.56
SCFD2-202ENST00000401642 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
SCFD2-202ENST00000401642 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
SCFD2-202ENST00000401642 HERC1Q15751 4861 aa5.27□□□□□ -1.57
SCFD2-202ENST00000401642 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
SCFD2-202ENST00000401642 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
SCFD2-202ENST00000401642 RNF213Q63HN8 5207 aa5.15□□□□□ -1.59
SCFD2-202ENST00000401642 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
SCFD2-202ENST00000401642 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
SCFD2-202ENST00000401642 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
SCFD2-202ENST00000401642 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
SCFD2-202ENST00000401642 M0R2T5 61 aa5.03□□□□□ -1.6
SCFD2-202ENST00000401642 KRTAP19-2Q3LHN2 52 aa5.02□□□□□ -1.61
SCFD2-202ENST00000401642 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
SCFD2-202ENST00000401642 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
SCFD2-202ENST00000401642 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
SCFD2-202ENST00000401642 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
SCFD2-202ENST00000401642 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
SCFD2-202ENST00000401642 TNP1P09430 55 aa4.79□□□□□ -1.64
SCFD2-202ENST00000401642 MT1HP80294 61 aa4.73□□□□□ -1.65
SCFD2-202ENST00000401642 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
SCFD2-202ENST00000401642 MT1FP04733 61 aa4.7□□□□□ -1.66
SCFD2-202ENST00000401642 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
SCFD2-202ENST00000401642 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
SCFD2-202ENST00000401642 MT2AP02795 61 aa4.66□□□□□ -1.66
SCFD2-202ENST00000401642 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
SCFD2-202ENST00000401642 USH2AO75445 5202 aa4.6□□□□□ -1.67
SCFD2-202ENST00000401642 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
SCFD2-202ENST00000401642 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.68
SCFD2-202ENST00000401642 KMT2DO14686 5537 aa4.49□□□□□ -1.69
SCFD2-202ENST00000401642 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
SCFD2-202ENST00000401642 MT1BP07438 61 aa4.46□□□□□ -1.7
SCFD2-202ENST00000401642 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
SCFD2-202ENST00000401642 MT1XP80297 61 aa4.43□□□□□ -1.7
SCFD2-202ENST00000401642 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
SCFD2-202ENST00000401642 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
SCFD2-202ENST00000401642 INE1O15225 51 aa4.4□□□□□ -1.71
SCFD2-202ENST00000401642 KRTAP19-8Q3LI54 63 aa4.39□□□□□ -1.71
SCFD2-202ENST00000401642 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
SCFD2-202ENST00000401642 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
SCFD2-202ENST00000401642 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
SCFD2-202ENST00000401642 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
SCFD2-202ENST00000401642 LCE2BO14633 110 aa4.3□□□□□ -1.72
SCFD2-202ENST00000401642 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
SCFD2-202ENST00000401642 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
SCFD2-202ENST00000401642 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
SCFD2-202ENST00000401642 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
SCFD2-202ENST00000401642 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
SCFD2-202ENST00000401642 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
SCFD2-202ENST00000401642 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
SCFD2-202ENST00000401642 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
SCFD2-202ENST00000401642 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
SCFD2-202ENST00000401642 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
SCFD2-202ENST00000401642 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
SCFD2-202ENST00000401642 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
SCFD2-202ENST00000401642 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
SCFD2-202ENST00000401642 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
SCFD2-202ENST00000401642 LCE2DQ5TA82 110 aaPredicted RBP3.85□□□□□ -1.79
SCFD2-202ENST00000401642 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.8
SCFD2-202ENST00000401642 MT1EP04732 61 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms