RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 RYR3Q15413 4870 aa9.17□□□□□ -0.94
PTPRA-205ENST00000399903 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
PTPRA-205ENST00000399903 C10orf95Q9H7T3 257 aa9.13□□□□□ -0.95
PTPRA-205ENST00000399903 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
PTPRA-205ENST00000399903 NDUFAF8A1L188 74 aa9.06□□□□□ -0.96
PTPRA-205ENST00000399903 PKHD1L1Q86WI1 4243 aa9.05□□□□□ -0.96
PTPRA-205ENST00000399903 KRTAP10-4P60372 401 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-205ENST00000399903 RPL37P61927 97 aaKnown RBP9.03□□□□□ -0.96
PTPRA-205ENST00000399903 KIAA1109Q2LD37 5005 aa9.03□□□□□ -0.96
PTPRA-205ENST00000399903 TPRXLQ17RH7 258 aa9.02□□□□□ -0.97
PTPRA-205ENST00000399903 HSPG2P98160 4391 aa9.01□□□□□ -0.97
PTPRA-205ENST00000399903 KRTAP13-4Q3LI77 160 aa8.95□□□□□ -0.98
PTPRA-205ENST00000399903 KRTAP17-1Q9BYP8 105 aa8.92□□□□□ -0.98
PTPRA-205ENST00000399903 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
PTPRA-205ENST00000399903 Q5VSD8 79 aa8.89□□□□□ -0.99
PTPRA-205ENST00000399903 EPPK1P58107 5090 aaKnown RBP8.89□□□□□ -0.99
PTPRA-205ENST00000399903 RYR1P21817 5038 aa8.89□□□□□ -0.99
PTPRA-205ENST00000399903 TNXBP22105 4242 aa8.87□□□□□ -0.99
PTPRA-205ENST00000399903 FAT3Q8TDW7 4589 aa8.85□□□□□ -0.99
PTPRA-205ENST00000399903 KRTAP10-6P60371 365 aaPredicted RBP8.82□□□□□ -1
PTPRA-205ENST00000399903 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
PTPRA-205ENST00000399903 S4R3F8 94 aa8.75□□□□□ -1.01
PTPRA-205ENST00000399903 KRTAP15-1Q3LI76 137 aa8.73□□□□□ -1.01
PTPRA-205ENST00000399903 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
PTPRA-205ENST00000399903 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
PTPRA-205ENST00000399903 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
PTPRA-205ENST00000399903 KRTAP10-8P60410 259 aa8.67□□□□□ -1.02
PTPRA-205ENST00000399903 LPAP08519 4548 aa8.64□□□□□ -1.03
PTPRA-205ENST00000399903 LRP2P98164 4655 aa8.6□□□□□ -1.03
PTPRA-205ENST00000399903 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
PTPRA-205ENST00000399903 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
PTPRA-205ENST00000399903 MT1HL1P0DM35 61 aa8.54□□□□□ -1.04
PTPRA-205ENST00000399903 KRTAP12-1P59990 96 aa8.53□□□□□ -1.04
PTPRA-205ENST00000399903 XP32Q5T750 250 aa8.52□□□□□ -1.05
PTPRA-205ENST00000399903 HERC2O95714 4834 aa8.36□□□□□ -1.07
PTPRA-205ENST00000399903 M0QZ58 72 aa8.33□□□□□ -1.08
PTPRA-205ENST00000399903 LUZP6Q538Z0 58 aa8.32□□□□□ -1.08
PTPRA-205ENST00000399903 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
PTPRA-205ENST00000399903 R4GN34 69 aa8.24□□□□□ -1.09
PTPRA-205ENST00000399903 MUC2Q02817 5179 aa8.22□□□□□ -1.09
PTPRA-205ENST00000399903 J3QL48 77 aa8.19□□□□□ -1.1
PTPRA-205ENST00000399903 HERC1Q15751 4861 aa8.12□□□□□ -1.11
PTPRA-205ENST00000399903 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
PTPRA-205ENST00000399903 PCLOQ9Y6V0 5065 aa8.01□□□□□ -1.13
PTPRA-205ENST00000399903 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
PTPRA-205ENST00000399903 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
PTPRA-205ENST00000399903 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
PTPRA-205ENST00000399903 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
PTPRA-205ENST00000399903 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
PTPRA-205ENST00000399903 FAT4Q6V0I7 4981 aa7.83□□□□□ -1.16
PTPRA-205ENST00000399903 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
PTPRA-205ENST00000399903 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.17
PTPRA-205ENST00000399903 PP632Q6XCG6 107 aa7.72□□□□□ -1.17
PTPRA-205ENST00000399903 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
PTPRA-205ENST00000399903 KRTAP19-2Q3LHN2 52 aa7.63□□□□□ -1.19
PTPRA-205ENST00000399903 FLGP20930 4061 aaPredicted RBP7.59□□□□□ -1.2
PTPRA-205ENST00000399903 TNP1P09430 55 aa7.55□□□□□ -1.2
PTPRA-205ENST00000399903 M0R2T5 61 aa7.37□□□□□ -1.23
PTPRA-205ENST00000399903 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
PTPRA-205ENST00000399903 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
PTPRA-205ENST00000399903 MT1HP80294 61 aa7.17□□□□□ -1.26
PTPRA-205ENST00000399903 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
PTPRA-205ENST00000399903 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
PTPRA-205ENST00000399903 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
PTPRA-205ENST00000399903 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
PTPRA-205ENST00000399903 MT1FP04733 61 aa7.05□□□□□ -1.28
PTPRA-205ENST00000399903 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
PTPRA-205ENST00000399903 MT2AP02795 61 aa7.01□□□□□ -1.29
PTPRA-205ENST00000399903 KRTAP9-8Q9BYQ0 159 aa6.95□□□□□ -1.3
PTPRA-205ENST00000399903 SPRR2GQ9BYE4 73 aa6.91□□□□□ -1.3
PTPRA-205ENST00000399903 USH2AO75445 5202 aa6.9□□□□□ -1.3
PTPRA-205ENST00000399903 INE1O15225 51 aa6.88□□□□□ -1.31
PTPRA-205ENST00000399903 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
PTPRA-205ENST00000399903 MT1BP07438 61 aa6.7□□□□□ -1.34
PTPRA-205ENST00000399903 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
PTPRA-205ENST00000399903 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.35
PTPRA-205ENST00000399903 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.35
PTPRA-205ENST00000399903 KMT2DO14686 5537 aa6.64□□□□□ -1.35
PTPRA-205ENST00000399903 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
PTPRA-205ENST00000399903 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
PTPRA-205ENST00000399903 MT1XP80297 61 aa6.59□□□□□ -1.35
PTPRA-205ENST00000399903 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
PTPRA-205ENST00000399903 LCE2BO14633 110 aa6.53□□□□□ -1.36
PTPRA-205ENST00000399903 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
PTPRA-205ENST00000399903 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
PTPRA-205ENST00000399903 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
PTPRA-205ENST00000399903 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
PTPRA-205ENST00000399903 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
PTPRA-205ENST00000399903 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
PTPRA-205ENST00000399903 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
PTPRA-205ENST00000399903 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
PTPRA-205ENST00000399903 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
PTPRA-205ENST00000399903 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
PTPRA-205ENST00000399903 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
PTPRA-205ENST00000399903 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
PTPRA-205ENST00000399903 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
PTPRA-205ENST00000399903 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
PTPRA-205ENST00000399903 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
PTPRA-205ENST00000399903 DSTQ03001 7570 aaKnown RBP5.8□□□□□ -1.48
PTPRA-205ENST00000399903 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms