RNA–Protein interactions for RNA: ENST00000398870.7

PIK3C3-202, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2 BASIC

Gene PIK3C3, Length 9,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-202ENST00000398870 LOC400499M0QZD8 3231 aa2.74□□□□□ -1.97
PIK3C3-202ENST00000398870 ANK2Q01484 3957 aa2.72□□□□□ -1.97
PIK3C3-202ENST00000398870 KRTAP4-5Q9BYR2 181 aa2.72□□□□□ -1.97
PIK3C3-202ENST00000398870 SPRR2DP22532 72 aa2.7□□□□□ -1.98
PIK3C3-202ENST00000398870 LYSTQ99698 3801 aa2.7□□□□□ -1.98
PIK3C3-202ENST00000398870 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
PIK3C3-202ENST00000398870 DNAH3Q8TD57 4116 aa2.68□□□□□ -1.98
PIK3C3-202ENST00000398870 HUWE1Q7Z6Z7 4374 aaKnown RBP2.68□□□□□ -1.98
PIK3C3-202ENST00000398870 KRTAP10-4P60372 401 aaPredicted RBP2.66□□□□□ -1.98
PIK3C3-202ENST00000398870 KRTAP19-4Q3LI73 84 aa2.65□□□□□ -1.99
PIK3C3-202ENST00000398870 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.99
PIK3C3-202ENST00000398870 LCE2BO14633 110 aa2.64□□□□□ -1.99
PIK3C3-202ENST00000398870 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
PIK3C3-202ENST00000398870 DNAH1Q9P2D7 4330 aa2.63□□□□□ -1.99
PIK3C3-202ENST00000398870 RELNP78509 3460 aa2.62□□□□□ -1.99
PIK3C3-202ENST00000398870 LCE3BQ5TA77 95 aa2.62□□□□□ -1.99
PIK3C3-202ENST00000398870 MT1HP80294 61 aa2.61□□□□□ -1.99
PIK3C3-202ENST00000398870 CSMD3Q7Z407 3707 aa2.61□□□□□ -1.99
PIK3C3-202ENST00000398870 DCHS1Q96JQ0 3298 aa2.57□□□□□ -2
PIK3C3-202ENST00000398870 DNAH6Q9C0G6 4158 aa2.56□□□□□ -2
PIK3C3-202ENST00000398870 MUC3AQ02505 3323 aa2.56□□□□□ -2
PIK3C3-202ENST00000398870 CUBNO60494 3623 aa2.56□□□□□ -2
PIK3C3-202ENST00000398870 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
PIK3C3-202ENST00000398870 CSMD1Q96PZ7 3565 aa2.54□□□□□ -2
PIK3C3-202ENST00000398870 SVEP1Q4LDE5 3571 aa2.53□□□□□ -2
PIK3C3-202ENST00000398870 LCE2CQ5TA81 110 aa2.53□□□□□ -2
PIK3C3-202ENST00000398870 ZNF469Q96JG9 3925 aaPredicted RBP2.53□□□□□ -2
PIK3C3-202ENST00000398870 MT2AP02795 61 aa2.51□□□□□ -2.01
PIK3C3-202ENST00000398870 KMT2AQ03164 3969 aa2.49□□□□□ -2.01
PIK3C3-202ENST00000398870 CSMD2Q7Z408 3487 aa2.47□□□□□ -2.01
PIK3C3-202ENST00000398870 VPS13BQ7Z7G8 4022 aa2.46□□□□□ -2.01
PIK3C3-202ENST00000398870 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
PIK3C3-202ENST00000398870 LCE2DQ5TA82 110 aaPredicted RBP2.46□□□□□ -2.02
PIK3C3-202ENST00000398870 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
PIK3C3-202ENST00000398870 DNAH2Q9P225 4427 aa2.45□□□□□ -2.02
PIK3C3-202ENST00000398870 MT1FP04733 61 aa2.43□□□□□ -2.02
PIK3C3-202ENST00000398870 MT1GP13640 62 aa2.43□□□□□ -2.02
PIK3C3-202ENST00000398870 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
PIK3C3-202ENST00000398870 FRAS1Q86XX4 4008 aa2.4□□□□□ -2.03
PIK3C3-202ENST00000398870 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
PIK3C3-202ENST00000398870 PKHD1P08F94 4074 aa2.38□□□□□ -2.03
PIK3C3-202ENST00000398870 RYR1P21817 5038 aa2.38□□□□□ -2.03
PIK3C3-202ENST00000398870 MT3P25713 68 aa2.37□□□□□ -2.03
PIK3C3-202ENST00000398870 MT4P47944 62 aa2.37□□□□□ -2.03
PIK3C3-202ENST00000398870 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
PIK3C3-202ENST00000398870 PRKDCP78527 4128 aaKnown RBP2.36□□□□□ -2.03
PIK3C3-202ENST00000398870 DYNC2H1Q8NCM8 4307 aaKnown RBP2.34□□□□□ -2.03
PIK3C3-202ENST00000398870 ANK3Q12955 4377 aaKnown RBP2.32□□□□□ -2.04
PIK3C3-202ENST00000398870 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
PIK3C3-202ENST00000398870 KRTAP19-1Q8IUB9 90 aa2.29□□□□□ -2.04
PIK3C3-202ENST00000398870 LCE1DQ5T752 114 aa2.28□□□□□ -2.04
PIK3C3-202ENST00000398870 FAT2Q9NYQ8 4349 aa2.27□□□□□ -2.05
PIK3C3-202ENST00000398870 DNAH10Q8IVF4 4471 aa2.25□□□□□ -2.05
PIK3C3-202ENST00000398870 PKHD1L1Q86WI1 4243 aa2.23□□□□□ -2.05
PIK3C3-202ENST00000398870 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
PIK3C3-202ENST00000398870 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
PIK3C3-202ENST00000398870 MT1XP80297 61 aa2.21□□□□□ -2.05
PIK3C3-202ENST00000398870 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
PIK3C3-202ENST00000398870 LCE5AQ5TCM9 118 aa2.2□□□□□ -2.06
PIK3C3-202ENST00000398870 PRM1P04553 51 aa2.18□□□□□ -2.06
PIK3C3-202ENST00000398870 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
PIK3C3-202ENST00000398870 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
PIK3C3-202ENST00000398870 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
PIK3C3-202ENST00000398870 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
PIK3C3-202ENST00000398870 VPS13DQ5THJ4 4388 aa2.15□□□□□ -2.06
PIK3C3-202ENST00000398870 MT1LQ93083 61 aa2.15□□□□□ -2.07
PIK3C3-202ENST00000398870 DNAH17Q9UFH2 4485 aa2.14□□□□□ -2.07
PIK3C3-202ENST00000398870 KRTAP17-1Q9BYP8 105 aa2.11□□□□□ -2.07
PIK3C3-202ENST00000398870 KRTAP4-8A0A0G2JLE6 195 aa2.11□□□□□ -2.07
PIK3C3-202ENST00000398870 KRTAP4-8Q9BYQ9 185 aa2.11□□□□□ -2.07
PIK3C3-202ENST00000398870 KRTAP9-2Q9BYQ4 174 aa2.11□□□□□ -2.07
PIK3C3-202ENST00000398870 STARD9Q9P2P6 4700 aa2.1□□□□□ -2.07
PIK3C3-202ENST00000398870 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
PIK3C3-202ENST00000398870 KRTAP19-6Q3LI70 58 aa2.09□□□□□ -2.08
PIK3C3-202ENST00000398870 DNAH11Q96DT5 4516 aa2.09□□□□□ -2.08
PIK3C3-202ENST00000398870 KRTAP9-6A0A140TA67 174 aa2.07□□□□□ -2.08
PIK3C3-202ENST00000398870 DNAH9Q9NYC9 4486 aa2.06□□□□□ -2.08
PIK3C3-202ENST00000398870 MT1BP07438 61 aa2.06□□□□□ -2.08
PIK3C3-202ENST00000398870 MT1EP04732 61 aa2.05□□□□□ -2.08
PIK3C3-202ENST00000398870 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
PIK3C3-202ENST00000398870 MT1MQ8N339 61 aa2.05□□□□□ -2.08
PIK3C3-202ENST00000398870 PKD1P98161 4303 aa2.04□□□□□ -2.08
PIK3C3-202ENST00000398870 KRTAP9-8Q9BYQ0 159 aa2.04□□□□□ -2.08
PIK3C3-202ENST00000398870 KRTAP9-3Q9BYQ3 159 aa2.04□□□□□ -2.08
PIK3C3-202ENST00000398870 DNAH8Q96JB1 4490 aa2.02□□□□□ -2.09
PIK3C3-202ENST00000398870 TNXBP22105 4242 aa2□□□□□ -2.09
PIK3C3-202ENST00000398870 PLECQ15149 4684 aaKnown RBP2□□□□□ -2.09
PIK3C3-202ENST00000398870 KRTAP2-3P0C7H8 128 aa1.98□□□□□ -2.09
PIK3C3-202ENST00000398870 KRTAP2-4Q9BYR9 128 aa1.98□□□□□ -2.09
PIK3C3-202ENST00000398870 HSPG2P98160 4391 aa1.96□□□□□ -2.1
PIK3C3-202ENST00000398870 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
PIK3C3-202ENST00000398870 KRTAP4-7Q9BYR0 210 aa1.95□□□□□ -2.1
PIK3C3-202ENST00000398870 LOC100996750A0A140TA64 210 aa1.95□□□□□ -2.1
PIK3C3-202ENST00000398870 KRTAP9-9Q9BYP9 154 aa1.95□□□□□ -2.1
PIK3C3-202ENST00000398870 KRTAP9-7A8MTY7 169 aa1.95□□□□□ -2.1
PIK3C3-202ENST00000398870 LCE4AQ5TA78 99 aa1.95□□□□□ -2.1
PIK3C3-202ENST00000398870 APOBP04114 4563 aaKnown RBP1.93□□□□□ -2.1
PIK3C3-202ENST00000398870 SACSQ9NZJ4 4579 aa1.93□□□□□ -2.1
PIK3C3-202ENST00000398870 MT1AP04731 61 aa1.92□□□□□ -2.1
PIK3C3-202ENST00000398870 LCE2AQ5TA79 106 aaPredicted RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms