RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 FAT2Q9NYQ8 4349 aa4.57□□□□□ -1.68
SEC24A-202ENST00000398844 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
SEC24A-202ENST00000398844 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
SEC24A-202ENST00000398844 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
SEC24A-202ENST00000398844 LRP1BQ9NZR2 4599 aa4.54□□□□□ -1.68
SEC24A-202ENST00000398844 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
SEC24A-202ENST00000398844 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
SEC24A-202ENST00000398844 HYDINQ4G0P3 5121 aa4.52□□□□□ -1.69
SEC24A-202ENST00000398844 KRTAP10-4P60372 401 aaPredicted RBP4.5□□□□□ -1.69
SEC24A-202ENST00000398844 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
SEC24A-202ENST00000398844 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
SEC24A-202ENST00000398844 PKD1P98161 4303 aa4.47□□□□□ -1.69
SEC24A-202ENST00000398844 DNHD1Q96M86 4753 aa4.45□□□□□ -1.7
SEC24A-202ENST00000398844 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
SEC24A-202ENST00000398844 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
SEC24A-202ENST00000398844 DYNC1H1Q14204 4646 aaKnown RBP4.43□□□□□ -1.7
SEC24A-202ENST00000398844 FAT1Q14517 4588 aa4.42□□□□□ -1.7
SEC24A-202ENST00000398844 MT1HL1P0DM35 61 aa4.42□□□□□ -1.7
SEC24A-202ENST00000398844 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
SEC24A-202ENST00000398844 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
SEC24A-202ENST00000398844 KRTAP3-3Q9BYR6 98 aa4.38□□□□□ -1.71
SEC24A-202ENST00000398844 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
SEC24A-202ENST00000398844 APOBP04114 4563 aaKnown RBP4.35□□□□□ -1.71
SEC24A-202ENST00000398844 TNP1P09430 55 aa4.35□□□□□ -1.71
SEC24A-202ENST00000398844 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
SEC24A-202ENST00000398844 KRTAP3-2Q9BYR7 98 aa4.3□□□□□ -1.72
SEC24A-202ENST00000398844 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
SEC24A-202ENST00000398844 HSPG2P98160 4391 aa4.26□□□□□ -1.73
SEC24A-202ENST00000398844 TNXBP22105 4242 aa4.25□□□□□ -1.73
SEC24A-202ENST00000398844 KRTAP17-1Q9BYP8 105 aa4.24□□□□□ -1.73
SEC24A-202ENST00000398844 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
SEC24A-202ENST00000398844 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
SEC24A-202ENST00000398844 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
SEC24A-202ENST00000398844 LPAP08519 4548 aa4.21□□□□□ -1.74
SEC24A-202ENST00000398844 LRP1Q07954 4544 aaKnown RBP4.21□□□□□ -1.74
SEC24A-202ENST00000398844 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
SEC24A-202ENST00000398844 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
SEC24A-202ENST00000398844 RYR2Q92736 4967 aa4.1□□□□□ -1.75
SEC24A-202ENST00000398844 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
SEC24A-202ENST00000398844 RYR1P21817 5038 aa4.04□□□□□ -1.76
SEC24A-202ENST00000398844 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
SEC24A-202ENST00000398844 RYR3Q15413 4870 aa3.99□□□□□ -1.77
SEC24A-202ENST00000398844 PRO2289Q9P1D8 64 aa3.98□□□□□ -1.77
SEC24A-202ENST00000398844 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
SEC24A-202ENST00000398844 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
SEC24A-202ENST00000398844 LRP2P98164 4655 aa3.88□□□□□ -1.79
SEC24A-202ENST00000398844 MT1HP80294 61 aa3.86□□□□□ -1.79
SEC24A-202ENST00000398844 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
SEC24A-202ENST00000398844 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
SEC24A-202ENST00000398844 MUC17Q685J3 4493 aa3.8□□□□□ -1.8
SEC24A-202ENST00000398844 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
SEC24A-202ENST00000398844 MT1FP04733 61 aa3.75□□□□□ -1.81
SEC24A-202ENST00000398844 MT2AP02795 61 aa3.74□□□□□ -1.81
SEC24A-202ENST00000398844 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
SEC24A-202ENST00000398844 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
SEC24A-202ENST00000398844 ABCA13Q86UQ4 5058 aa3.66□□□□□ -1.82
SEC24A-202ENST00000398844 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
SEC24A-202ENST00000398844 HERC2O95714 4834 aa3.64□□□□□ -1.83
SEC24A-202ENST00000398844 FLGP20930 4061 aaPredicted RBP3.58□□□□□ -1.84
SEC24A-202ENST00000398844 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
SEC24A-202ENST00000398844 LCE2CQ5TA81 110 aa3.57□□□□□ -1.84
SEC24A-202ENST00000398844 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
SEC24A-202ENST00000398844 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
SEC24A-202ENST00000398844 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
SEC24A-202ENST00000398844 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
SEC24A-202ENST00000398844 KRTAP19-2Q3LHN2 52 aa3.53□□□□□ -1.84
SEC24A-202ENST00000398844 KRTAP9-8Q9BYQ0 159 aa3.5□□□□□ -1.85
SEC24A-202ENST00000398844 HERC1Q15751 4861 aa3.49□□□□□ -1.85
SEC24A-202ENST00000398844 MUC2Q02817 5179 aa3.48□□□□□ -1.85
SEC24A-202ENST00000398844 MT1XP80297 61 aa3.47□□□□□ -1.85
SEC24A-202ENST00000398844 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
SEC24A-202ENST00000398844 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
SEC24A-202ENST00000398844 MT1BP07438 61 aa3.45□□□□□ -1.86
SEC24A-202ENST00000398844 KRTAP4-8A0A0G2JLE6 195 aa3.41□□□□□ -1.86
SEC24A-202ENST00000398844 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
SEC24A-202ENST00000398844 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
SEC24A-202ENST00000398844 INE1O15225 51 aa3.38□□□□□ -1.87
SEC24A-202ENST00000398844 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
SEC24A-202ENST00000398844 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
SEC24A-202ENST00000398844 PCLOQ9Y6V0 5065 aa3.37□□□□□ -1.87
SEC24A-202ENST00000398844 LCE2BO14633 110 aa3.3□□□□□ -1.88
SEC24A-202ENST00000398844 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
SEC24A-202ENST00000398844 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
SEC24A-202ENST00000398844 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
SEC24A-202ENST00000398844 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
SEC24A-202ENST00000398844 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
SEC24A-202ENST00000398844 MT1GP13640 62 aa3.21□□□□□ -1.9
SEC24A-202ENST00000398844 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
SEC24A-202ENST00000398844 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
SEC24A-202ENST00000398844 SPRR2EP22531 72 aa3.13□□□□□ -1.91
SEC24A-202ENST00000398844 SPRR2BP35325 72 aa3.13□□□□□ -1.91
SEC24A-202ENST00000398844 SPRR2AP35326 72 aa3.13□□□□□ -1.91
SEC24A-202ENST00000398844 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
SEC24A-202ENST00000398844 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
SEC24A-202ENST00000398844 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
SEC24A-202ENST00000398844 MT1LQ93083 61 aa3.04□□□□□ -1.92
SEC24A-202ENST00000398844 SPRR2DP22532 72 aa3.04□□□□□ -1.92
SEC24A-202ENST00000398844 MT1EP04732 61 aa3.03□□□□□ -1.92
SEC24A-202ENST00000398844 KMT2DO14686 5537 aa3.03□□□□□ -1.92
SEC24A-202ENST00000398844 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms