RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 PKHD1L1Q86WI1 4243 aa12.24□□□□□ -0.45
KHSRP-201ENST00000398148 KRTAP10-8P60410 259 aa12.22□□□□□ -0.45
KHSRP-201ENST00000398148 KRTAP10-6P60371 365 aaPredicted RBP12.2□□□□□ -0.46
KHSRP-201ENST00000398148 P0C880 135 aa12.18□□□□□ -0.46
KHSRP-201ENST00000398148 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
KHSRP-201ENST00000398148 KRTAP3-3Q9BYR6 98 aa12.17□□□□□ -0.46
KHSRP-201ENST00000398148 SPINT4Q6UDR6 99 aa12.16□□□□□ -0.46
KHSRP-201ENST00000398148 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
KHSRP-201ENST00000398148 TPRXLQ17RH7 258 aa12.14□□□□□ -0.47
KHSRP-201ENST00000398148 FAT3Q8TDW7 4589 aa12.1□□□□□ -0.47
KHSRP-201ENST00000398148 LPAP08519 4548 aa12.09□□□□□ -0.47
KHSRP-201ENST00000398148 KRTAP3-2Q9BYR7 98 aa12.06□□□□□ -0.48
KHSRP-201ENST00000398148 S4R3F8 94 aa12.03□□□□□ -0.48
KHSRP-201ENST00000398148 KMT2CQ8NEZ4 4911 aaKnown RBP12.02□□□□□ -0.49
KHSRP-201ENST00000398148 KRTAP12-2P59991 146 aa11.96□□□□□ -0.49
KHSRP-201ENST00000398148 A0A1B0GVY2 172 aa11.93□□□□□ -0.5
KHSRP-201ENST00000398148 TNXBP22105 4242 aa11.9□□□□□ -0.51
KHSRP-201ENST00000398148 XP32Q5T750 250 aa11.89□□□□□ -0.51
KHSRP-201ENST00000398148 LRP2P98164 4655 aa11.82□□□□□ -0.52
KHSRP-201ENST00000398148 NDUFAF8A1L188 74 aa11.79□□□□□ -0.52
KHSRP-201ENST00000398148 RYR2Q92736 4967 aa11.76□□□□□ -0.53
KHSRP-201ENST00000398148 Q5VSD8 79 aa11.76□□□□□ -0.53
KHSRP-201ENST00000398148 KRTAP12-1P59990 96 aa11.7□□□□□ -0.54
KHSRP-201ENST00000398148 KRTAP17-1Q9BYP8 105 aa11.66□□□□□ -0.54
KHSRP-201ENST00000398148 KIAA1109Q2LD37 5005 aa11.64□□□□□ -0.55
KHSRP-201ENST00000398148 RYR1P21817 5038 aa11.59□□□□□ -0.55
KHSRP-201ENST00000398148 KRTAP15-1Q3LI76 137 aa11.55□□□□□ -0.56
KHSRP-201ENST00000398148 RYR3Q15413 4870 aa11.49□□□□□ -0.57
KHSRP-201ENST00000398148 M0QZ58 72 aa11.46□□□□□ -0.57
KHSRP-201ENST00000398148 ABCA13Q86UQ4 5058 aa11.44□□□□□ -0.58
KHSRP-201ENST00000398148 MT1HL1P0DM35 61 aa11.34□□□□□ -0.59
KHSRP-201ENST00000398148 R4GN34 69 aa11.33□□□□□ -0.6
KHSRP-201ENST00000398148 LORP23490 312 aaPredicted RBP11.29□□□□□ -0.6
KHSRP-201ENST00000398148 MUC2Q02817 5179 aa11.15□□□□□ -0.62
KHSRP-201ENST00000398148 EPPK1P58107 5090 aaKnown RBP11.11□□□□□ -0.63
KHSRP-201ENST00000398148 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
KHSRP-201ENST00000398148 KRTAP21-3Q3LHN1 58 aa11□□□□□ -0.65
KHSRP-201ENST00000398148 PLAC4Q8WY50 150 aa10.99□□□□□ -0.65
KHSRP-201ENST00000398148 KRTAP4-1Q9BYQ7 146 aa10.91□□□□□ -0.66
KHSRP-201ENST00000398148 CAMK2N1Q7Z7J9 78 aa10.9□□□□□ -0.66
KHSRP-201ENST00000398148 MUC17Q685J3 4493 aa10.85□□□□□ -0.67
KHSRP-201ENST00000398148 SEC61BP60468 96 aaKnown RBP10.69□□□□□ -0.7
KHSRP-201ENST00000398148 LUZP6Q538Z0 58 aa10.59□□□□□ -0.71
KHSRP-201ENST00000398148 J3QL48 77 aa10.57□□□□□ -0.72
KHSRP-201ENST00000398148 FAT4Q6V0I7 4981 aa10.51□□□□□ -0.73
KHSRP-201ENST00000398148 PCLOQ9Y6V0 5065 aa10.5□□□□□ -0.73
KHSRP-201ENST00000398148 HERC2O95714 4834 aa10.48□□□□□ -0.73
KHSRP-201ENST00000398148 KRTAP19-2Q3LHN2 52 aa10.4□□□□□ -0.75
KHSRP-201ENST00000398148 PP632Q6XCG6 107 aa10.34□□□□□ -0.75
KHSRP-201ENST00000398148 A0A0A0MQY5 61 aa10.32□□□□□ -0.76
KHSRP-201ENST00000398148 TNP1P09430 55 aa10.29□□□□□ -0.76
KHSRP-201ENST00000398148 HERC1Q15751 4861 aa10.27□□□□□ -0.77
KHSRP-201ENST00000398148 FLGP20930 4061 aaPredicted RBP10.23□□□□□ -0.77
KHSRP-201ENST00000398148 RNF213Q63HN8 5207 aa10.16□□□□□ -0.78
KHSRP-201ENST00000398148 M0R2T5 61 aa9.99□□□□□ -0.81
KHSRP-201ENST00000398148 BIRC6Q9NR09 4857 aa9.95□□□□□ -0.82
KHSRP-201ENST00000398148 HMCN2Q8NDA2 5059 aa9.93□□□□□ -0.82
KHSRP-201ENST00000398148 SPRR5A0A1B0GTR4 108 aa9.89□□□□□ -0.83
KHSRP-201ENST00000398148 LCE3AQ5TA76 89 aa9.87□□□□□ -0.83
KHSRP-201ENST00000398148 KRTAP19-1Q8IUB9 90 aa9.78□□□□□ -0.84
KHSRP-201ENST00000398148 UBR4Q5T4S7 5183 aa9.78□□□□□ -0.84
KHSRP-201ENST00000398148 KRTAP23-1A1A580 65 aa9.75□□□□□ -0.85
KHSRP-201ENST00000398148 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
KHSRP-201ENST00000398148 KRTAP10-10P60014 251 aa9.7□□□□□ -0.86
KHSRP-201ENST00000398148 SPRR2GQ9BYE4 73 aa9.63□□□□□ -0.87
KHSRP-201ENST00000398148 MT1FP04733 61 aa9.56□□□□□ -0.88
KHSRP-201ENST00000398148 MT1HP80294 61 aa9.49□□□□□ -0.89
KHSRP-201ENST00000398148 MT2AP02795 61 aa9.46□□□□□ -0.9
KHSRP-201ENST00000398148 KMT2DO14686 5537 aa9.35□□□□□ -0.91
KHSRP-201ENST00000398148 USH2AO75445 5202 aa9.32□□□□□ -0.92
KHSRP-201ENST00000398148 KRTAP9-8Q9BYQ0 159 aa9.29□□□□□ -0.92
KHSRP-201ENST00000398148 KRTAP12-3P60328 96 aa9.27□□□□□ -0.93
KHSRP-201ENST00000398148 KRTAP10-5P60370 271 aa9.27□□□□□ -0.93
KHSRP-201ENST00000398148 MT1XP80297 61 aa9.25□□□□□ -0.93
KHSRP-201ENST00000398148 KRTAP8-1Q8IUC2 63 aa9.25□□□□□ -0.93
KHSRP-201ENST00000398148 KRTAP10-7P60409 375 aaPredicted RBP9.23□□□□□ -0.93
KHSRP-201ENST00000398148 KRTAP10-12P60413 245 aa9.22□□□□□ -0.93
KHSRP-201ENST00000398148 MT1BP07438 61 aa9.21□□□□□ -0.94
KHSRP-201ENST00000398148 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
KHSRP-201ENST00000398148 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
KHSRP-201ENST00000398148 INE1O15225 51 aa8.98□□□□□ -0.97
KHSRP-201ENST00000398148 KRTAP19-5Q3LI72 72 aa8.86□□□□□ -0.99
KHSRP-201ENST00000398148 KRTAP9-3Q9BYQ3 159 aa8.82□□□□□ -1
KHSRP-201ENST00000398148 KRTAP4-8A0A0G2JLE6 195 aa8.78□□□□□ -1
KHSRP-201ENST00000398148 KRTAP4-8Q9BYQ9 185 aa8.78□□□□□ -1
KHSRP-201ENST00000398148 KRTAP4-7Q9BYR0 210 aa8.67□□□□□ -1.02
KHSRP-201ENST00000398148 LCE3CQ5T5A8 94 aa8.67□□□□□ -1.02
KHSRP-201ENST00000398148 KRTAP9-6A8MVA2 160 aa8.61□□□□□ -1.03
KHSRP-201ENST00000398148 LCE2BO14633 110 aa8.61□□□□□ -1.03
KHSRP-201ENST00000398148 FSIP2Q5CZC0 6907 aa8.57□□□□□ -1.04
KHSRP-201ENST00000398148 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
KHSRP-201ENST00000398148 DSTQ03001 7570 aaKnown RBP8.16□□□□□ -1.1
KHSRP-201ENST00000398148 KRTAP2-3P0C7H8 128 aa8.08□□□□□ -1.12
KHSRP-201ENST00000398148 KRTAP2-4Q9BYR9 128 aa8.08□□□□□ -1.12
KHSRP-201ENST00000398148 KRTAP2-1Q9BYU5 128 aa8.08□□□□□ -1.12
KHSRP-201ENST00000398148 CRCT1Q9UGL9 99 aa8.06□□□□□ -1.12
KHSRP-201ENST00000398148 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
KHSRP-201ENST00000398148 MUC12Q9UKN1 5478 aa8.05□□□□□ -1.12
KHSRP-201ENST00000398148 FCGBPQ9Y6R7 5405 aaPredicted RBP8.02□□□□□ -1.13
KHSRP-201ENST00000398148 KRTAP4-3Q9BYR4 195 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 881.1 ms