RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 MT1HP80294 61 aa4.53□□□□□ -1.68
RGPD2-201ENST00000398146 MEGF8Q7Z7M0 2845 aa4.53□□□□□ -1.68
RGPD2-201ENST00000398146 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
RGPD2-201ENST00000398146 ANK3Q12955 4377 aaKnown RBP4.49□□□□□ -1.69
RGPD2-201ENST00000398146 COL7A1Q02388 2944 aa4.46□□□□□ -1.69
RGPD2-201ENST00000398146 SPRR2DP22532 72 aa4.46□□□□□ -1.7
RGPD2-201ENST00000398146 ZNF469Q96JG9 3925 aaPredicted RBP4.45□□□□□ -1.7
RGPD2-201ENST00000398146 HUWE1Q7Z6Z7 4374 aaKnown RBP4.43□□□□□ -1.7
RGPD2-201ENST00000398146 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
RGPD2-201ENST00000398146 FBN1P35555 2871 aaKnown RBP4.39□□□□□ -1.71
RGPD2-201ENST00000398146 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
RGPD2-201ENST00000398146 MT2AP02795 61 aa4.37□□□□□ -1.71
RGPD2-201ENST00000398146 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
RGPD2-201ENST00000398146 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
RGPD2-201ENST00000398146 LCE2BO14633 110 aa4.3□□□□□ -1.72
RGPD2-201ENST00000398146 MT1FP04733 61 aa4.28□□□□□ -1.72
RGPD2-201ENST00000398146 TRRAPQ9Y4A5 3859 aa4.27□□□□□ -1.73
RGPD2-201ENST00000398146 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
RGPD2-201ENST00000398146 OTOGQ6ZRI0 2925 aa4.23□□□□□ -1.73
RGPD2-201ENST00000398146 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
RGPD2-201ENST00000398146 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.73
RGPD2-201ENST00000398146 CSMD3Q7Z407 3707 aa4.18□□□□□ -1.74
RGPD2-201ENST00000398146 MT1GP13640 62 aa4.15□□□□□ -1.74
RGPD2-201ENST00000398146 ANK2Q01484 3957 aa4.14□□□□□ -1.75
RGPD2-201ENST00000398146 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
RGPD2-201ENST00000398146 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
RGPD2-201ENST00000398146 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
RGPD2-201ENST00000398146 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
RGPD2-201ENST00000398146 DNAH2Q9P225 4427 aa4.08□□□□□ -1.76
RGPD2-201ENST00000398146 MT4P47944 62 aa4.06□□□□□ -1.76
RGPD2-201ENST00000398146 LYSTQ99698 3801 aa4.05□□□□□ -1.76
RGPD2-201ENST00000398146 DNAH5Q8TE73 4624 aa4□□□□□ -1.77
RGPD2-201ENST00000398146 KRTAP19-1Q8IUB9 90 aa4□□□□□ -1.77
RGPD2-201ENST00000398146 DNAH9Q9NYC9 4486 aa3.99□□□□□ -1.77
RGPD2-201ENST00000398146 DNAH10Q8IVF4 4471 aa3.93□□□□□ -1.78
RGPD2-201ENST00000398146 PLECQ15149 4684 aaKnown RBP3.93□□□□□ -1.78
RGPD2-201ENST00000398146 CMYA5Q8N3K9 4069 aa3.92□□□□□ -1.78
RGPD2-201ENST00000398146 KRTAP17-1Q9BYP8 105 aa3.91□□□□□ -1.78
RGPD2-201ENST00000398146 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
RGPD2-201ENST00000398146 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.78
RGPD2-201ENST00000398146 DNAH17Q9UFH2 4485 aa3.88□□□□□ -1.79
RGPD2-201ENST00000398146 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
RGPD2-201ENST00000398146 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
RGPD2-201ENST00000398146 FAT2Q9NYQ8 4349 aa3.86□□□□□ -1.79
RGPD2-201ENST00000398146 DNAH7Q8WXX0 4024 aa3.85□□□□□ -1.79
RGPD2-201ENST00000398146 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
RGPD2-201ENST00000398146 FAT1Q14517 4588 aa3.85□□□□□ -1.79
RGPD2-201ENST00000398146 DNAH11Q96DT5 4516 aa3.83□□□□□ -1.8
RGPD2-201ENST00000398146 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
RGPD2-201ENST00000398146 KRTAP9-2Q9BYQ4 174 aa3.79□□□□□ -1.8
RGPD2-201ENST00000398146 MT1XP80297 61 aa3.77□□□□□ -1.81
RGPD2-201ENST00000398146 VPS13BQ7Z7G8 4022 aa3.77□□□□□ -1.81
RGPD2-201ENST00000398146 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
RGPD2-201ENST00000398146 DNAH8Q96JB1 4490 aa3.74□□□□□ -1.81
RGPD2-201ENST00000398146 LRP1BQ9NZR2 4599 aa3.73□□□□□ -1.81
RGPD2-201ENST00000398146 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
RGPD2-201ENST00000398146 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
RGPD2-201ENST00000398146 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
RGPD2-201ENST00000398146 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
RGPD2-201ENST00000398146 SACSQ9NZJ4 4579 aa3.68□□□□□ -1.82
RGPD2-201ENST00000398146 DNAH3Q8TD57 4116 aa3.68□□□□□ -1.82
RGPD2-201ENST00000398146 MT1BP07438 61 aa3.67□□□□□ -1.82
RGPD2-201ENST00000398146 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
RGPD2-201ENST00000398146 FRAS1Q86XX4 4008 aa3.67□□□□□ -1.82
RGPD2-201ENST00000398146 RYR1P21817 5038 aa3.66□□□□□ -1.82
RGPD2-201ENST00000398146 DYNC1H1Q14204 4646 aaKnown RBP3.65□□□□□ -1.82
RGPD2-201ENST00000398146 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
RGPD2-201ENST00000398146 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
RGPD2-201ENST00000398146 DYNC2H1Q8NCM8 4307 aaKnown RBP3.62□□□□□ -1.83
RGPD2-201ENST00000398146 MT3P25713 68 aa3.6□□□□□ -1.83
RGPD2-201ENST00000398146 PRKDCP78527 4128 aaKnown RBP3.6□□□□□ -1.83
RGPD2-201ENST00000398146 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
RGPD2-201ENST00000398146 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
RGPD2-201ENST00000398146 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
RGPD2-201ENST00000398146 VPS13DQ5THJ4 4388 aa3.58□□□□□ -1.84
RGPD2-201ENST00000398146 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
RGPD2-201ENST00000398146 DNHD1Q96M86 4753 aa3.56□□□□□ -1.84
RGPD2-201ENST00000398146 STARD9Q9P2P6 4700 aa3.56□□□□□ -1.84
RGPD2-201ENST00000398146 KMT2AQ03164 3969 aa3.55□□□□□ -1.84
RGPD2-201ENST00000398146 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
RGPD2-201ENST00000398146 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
RGPD2-201ENST00000398146 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
RGPD2-201ENST00000398146 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
RGPD2-201ENST00000398146 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
RGPD2-201ENST00000398146 LOC100996750A0A140TA64 210 aa3.52□□□□□ -1.85
RGPD2-201ENST00000398146 PRM1P04553 51 aa3.51□□□□□ -1.85
RGPD2-201ENST00000398146 DNAH6Q9C0G6 4158 aa3.51□□□□□ -1.85
RGPD2-201ENST00000398146 HECTD4Q9Y4D8 3996 aa3.51□□□□□ -1.85
RGPD2-201ENST00000398146 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
RGPD2-201ENST00000398146 RYR3Q15413 4870 aa3.49□□□□□ -1.85
RGPD2-201ENST00000398146 KRTAP9-7A8MTY7 169 aa3.49□□□□□ -1.85
RGPD2-201ENST00000398146 MT1LQ93083 61 aa3.49□□□□□ -1.85
RGPD2-201ENST00000398146 HYDINQ4G0P3 5121 aa3.48□□□□□ -1.85
RGPD2-201ENST00000398146 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
RGPD2-201ENST00000398146 MT1EP04732 61 aa3.45□□□□□ -1.86
RGPD2-201ENST00000398146 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
RGPD2-201ENST00000398146 MT1MQ8N339 61 aa3.44□□□□□ -1.86
RGPD2-201ENST00000398146 PKHD1P08F94 4074 aa3.37□□□□□ -1.87
RGPD2-201ENST00000398146 PKD1P98161 4303 aa3.36□□□□□ -1.87
RGPD2-201ENST00000398146 LPAP08519 4548 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 889.9 ms