RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
CSGALNACT1-202ENST00000397998 DNAH2Q9P225 4427 aa5.5□□□□□ -1.53
CSGALNACT1-202ENST00000397998 KRTAP3-2Q9BYR7 98 aa5.5□□□□□ -1.53
CSGALNACT1-202ENST00000397998 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
CSGALNACT1-202ENST00000397998 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
CSGALNACT1-202ENST00000397998 DNAH5Q8TE73 4624 aa5.47□□□□□ -1.53
CSGALNACT1-202ENST00000397998 KRTAP10-4P60372 401 aaPredicted RBP5.45□□□□□ -1.54
CSGALNACT1-202ENST00000397998 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
CSGALNACT1-202ENST00000397998 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
CSGALNACT1-202ENST00000397998 HECTD4Q9Y4D8 3996 aa5.43□□□□□ -1.54
CSGALNACT1-202ENST00000397998 FAT1Q14517 4588 aa5.41□□□□□ -1.54
CSGALNACT1-202ENST00000397998 DNAH6Q9C0G6 4158 aa5.41□□□□□ -1.54
CSGALNACT1-202ENST00000397998 VPS13BQ7Z7G8 4022 aa5.37□□□□□ -1.55
CSGALNACT1-202ENST00000397998 KRTAP21-3Q3LHN1 58 aa5.37□□□□□ -1.55
CSGALNACT1-202ENST00000397998 DNHD1Q96M86 4753 aa5.36□□□□□ -1.55
CSGALNACT1-202ENST00000397998 DYNC2H1Q8NCM8 4307 aaKnown RBP5.34□□□□□ -1.55
CSGALNACT1-202ENST00000397998 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
CSGALNACT1-202ENST00000397998 M0R2T5 61 aa5.32□□□□□ -1.56
CSGALNACT1-202ENST00000397998 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
CSGALNACT1-202ENST00000397998 TNP1P09430 55 aa5.27□□□□□ -1.57
CSGALNACT1-202ENST00000397998 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
CSGALNACT1-202ENST00000397998 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
CSGALNACT1-202ENST00000397998 MYCBP2O75592 4640 aa5.24□□□□□ -1.57
CSGALNACT1-202ENST00000397998 SACSQ9NZJ4 4579 aa5.23□□□□□ -1.57
CSGALNACT1-202ENST00000397998 HYDINQ4G0P3 5121 aa5.17□□□□□ -1.58
CSGALNACT1-202ENST00000397998 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
CSGALNACT1-202ENST00000397998 PKHD1P08F94 4074 aa5.12□□□□□ -1.59
CSGALNACT1-202ENST00000397998 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
CSGALNACT1-202ENST00000397998 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
CSGALNACT1-202ENST00000397998 APOBP04114 4563 aaKnown RBP5.09□□□□□ -1.59
CSGALNACT1-202ENST00000397998 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
CSGALNACT1-202ENST00000397998 PKD1P98161 4303 aa5.02□□□□□ -1.61
CSGALNACT1-202ENST00000397998 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
CSGALNACT1-202ENST00000397998 RYR1P21817 5038 aa4.97□□□□□ -1.61
CSGALNACT1-202ENST00000397998 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.62
CSGALNACT1-202ENST00000397998 LRP2P98164 4655 aa4.92□□□□□ -1.62
CSGALNACT1-202ENST00000397998 KRTAP10-10P60014 251 aa4.92□□□□□ -1.62
CSGALNACT1-202ENST00000397998 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
CSGALNACT1-202ENST00000397998 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
CSGALNACT1-202ENST00000397998 HSPG2P98160 4391 aa4.88□□□□□ -1.63
CSGALNACT1-202ENST00000397998 RYR3Q15413 4870 aa4.84□□□□□ -1.63
CSGALNACT1-202ENST00000397998 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
CSGALNACT1-202ENST00000397998 RYR2Q92736 4967 aa4.79□□□□□ -1.64
CSGALNACT1-202ENST00000397998 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
CSGALNACT1-202ENST00000397998 LPAP08519 4548 aa4.72□□□□□ -1.65
CSGALNACT1-202ENST00000397998 TNXBP22105 4242 aa4.7□□□□□ -1.66
CSGALNACT1-202ENST00000397998 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
CSGALNACT1-202ENST00000397998 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
CSGALNACT1-202ENST00000397998 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
CSGALNACT1-202ENST00000397998 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CSGALNACT1-202ENST00000397998 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
CSGALNACT1-202ENST00000397998 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
CSGALNACT1-202ENST00000397998 HERC2O95714 4834 aa4.49□□□□□ -1.69
CSGALNACT1-202ENST00000397998 INE1O15225 51 aa4.48□□□□□ -1.69
CSGALNACT1-202ENST00000397998 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
CSGALNACT1-202ENST00000397998 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
CSGALNACT1-202ENST00000397998 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
CSGALNACT1-202ENST00000397998 MT2AP02795 61 aa4.42□□□□□ -1.7
CSGALNACT1-202ENST00000397998 MT1HP80294 61 aa4.42□□□□□ -1.7
CSGALNACT1-202ENST00000397998 MT1FP04733 61 aa4.42□□□□□ -1.7
CSGALNACT1-202ENST00000397998 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
CSGALNACT1-202ENST00000397998 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
CSGALNACT1-202ENST00000397998 MUC2Q02817 5179 aa4.37□□□□□ -1.71
CSGALNACT1-202ENST00000397998 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
CSGALNACT1-202ENST00000397998 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
CSGALNACT1-202ENST00000397998 LCE2CQ5TA81 110 aa4.3□□□□□ -1.72
CSGALNACT1-202ENST00000397998 FLGP20930 4061 aaPredicted RBP4.29□□□□□ -1.72
CSGALNACT1-202ENST00000397998 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
CSGALNACT1-202ENST00000397998 MT1XP80297 61 aa4.22□□□□□ -1.73
CSGALNACT1-202ENST00000397998 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
CSGALNACT1-202ENST00000397998 FAT4Q6V0I7 4981 aa4.21□□□□□ -1.73
CSGALNACT1-202ENST00000397998 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
CSGALNACT1-202ENST00000397998 MT1BP07438 61 aa4.2□□□□□ -1.74
CSGALNACT1-202ENST00000397998 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
CSGALNACT1-202ENST00000397998 HERC1Q15751 4861 aa4.19□□□□□ -1.74
CSGALNACT1-202ENST00000397998 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
CSGALNACT1-202ENST00000397998 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
CSGALNACT1-202ENST00000397998 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
CSGALNACT1-202ENST00000397998 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
CSGALNACT1-202ENST00000397998 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.75
CSGALNACT1-202ENST00000397998 CRCT1Q9UGL9 99 aa4.09□□□□□ -1.75
CSGALNACT1-202ENST00000397998 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
CSGALNACT1-202ENST00000397998 LCE2DQ5TA82 110 aaPredicted RBP4.04□□□□□ -1.76
CSGALNACT1-202ENST00000397998 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.77
CSGALNACT1-202ENST00000397998 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
CSGALNACT1-202ENST00000397998 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
CSGALNACT1-202ENST00000397998 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
CSGALNACT1-202ENST00000397998 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
CSGALNACT1-202ENST00000397998 LCE2BO14633 110 aa3.88□□□□□ -1.79
CSGALNACT1-202ENST00000397998 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
CSGALNACT1-202ENST00000397998 KMT2DO14686 5537 aa3.73□□□□□ -1.81
CSGALNACT1-202ENST00000397998 MT1GP13640 62 aa3.72□□□□□ -1.81
CSGALNACT1-202ENST00000397998 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
CSGALNACT1-202ENST00000397998 MT1LQ93083 61 aa3.72□□□□□ -1.81
CSGALNACT1-202ENST00000397998 USH2AO75445 5202 aa3.71□□□□□ -1.82
CSGALNACT1-202ENST00000397998 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
CSGALNACT1-202ENST00000397998 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
CSGALNACT1-202ENST00000397998 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
CSGALNACT1-202ENST00000397998 MT1EP04732 61 aa3.68□□□□□ -1.82
CSGALNACT1-202ENST00000397998 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms