RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 H0YAA0 97 aa9.77□□□□□ -0.85
CHRFAM7A-202ENST00000397827 Q5VSD8 79 aa9.76□□□□□ -0.85
CHRFAM7A-202ENST00000397827 DMBT1Q9UGM3 2413 aaPredicted RBP9.76□□□□□ -0.85
CHRFAM7A-202ENST00000397827 KRTAP10-8P60410 259 aa9.72□□□□□ -0.85
CHRFAM7A-202ENST00000397827 MYCBP2O75592 4640 aa9.71□□□□□ -0.85
CHRFAM7A-202ENST00000397827 RYR1P21817 5038 aa9.68□□□□□ -0.86
CHRFAM7A-202ENST00000397827 KRTAP17-1Q9BYP8 105 aa9.67□□□□□ -0.86
CHRFAM7A-202ENST00000397827 KIAA1109Q2LD37 5005 aa9.64□□□□□ -0.87
CHRFAM7A-202ENST00000397827 COX6B2Q6YFQ2 88 aa9.6□□□□□ -0.87
CHRFAM7A-202ENST00000397827 A0A1B0GU33 70 aa9.58□□□□□ -0.88
CHRFAM7A-202ENST00000397827 RPL37P61927 97 aaKnown RBP9.53□□□□□ -0.88
CHRFAM7A-202ENST00000397827 XP32Q5T750 250 aa9.53□□□□□ -0.88
CHRFAM7A-202ENST00000397827 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
CHRFAM7A-202ENST00000397827 H1FX-AS1Q4G0G2 97 aa9.5□□□□□ -0.89
CHRFAM7A-202ENST00000397827 K7ERS5 55 aa9.48□□□□□ -0.89
CHRFAM7A-202ENST00000397827 NDUFAF8A1L188 74 aa9.48□□□□□ -0.89
CHRFAM7A-202ENST00000397827 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
CHRFAM7A-202ENST00000397827 EPPK1P58107 5090 aaKnown RBP9.45□□□□□ -0.9
CHRFAM7A-202ENST00000397827 LPAP08519 4548 aa9.4□□□□□ -0.91
CHRFAM7A-202ENST00000397827 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
CHRFAM7A-202ENST00000397827 A0A0A0MQY5 61 aa9.37□□□□□ -0.91
CHRFAM7A-202ENST00000397827 LRP2P98164 4655 aa9.35□□□□□ -0.91
CHRFAM7A-202ENST00000397827 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
CHRFAM7A-202ENST00000397827 KRTAP15-1Q3LI76 137 aa9.3□□□□□ -0.92
CHRFAM7A-202ENST00000397827 S4R3F8 94 aa9.28□□□□□ -0.92
CHRFAM7A-202ENST00000397827 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.93
CHRFAM7A-202ENST00000397827 C10orf95Q9H7T3 257 aa9.25□□□□□ -0.93
CHRFAM7A-202ENST00000397827 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
CHRFAM7A-202ENST00000397827 KRTAP4-5Q9BYR2 181 aa9.21□□□□□ -0.93
CHRFAM7A-202ENST00000397827 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
CHRFAM7A-202ENST00000397827 KRTAP13-4Q3LI77 160 aa9.16□□□□□ -0.94
CHRFAM7A-202ENST00000397827 A0A0D9SG42 100 aa9.13□□□□□ -0.95
CHRFAM7A-202ENST00000397827 HERC2O95714 4834 aa8.91□□□□□ -0.98
CHRFAM7A-202ENST00000397827 LUZP6Q538Z0 58 aa8.9□□□□□ -0.98
CHRFAM7A-202ENST00000397827 MUC17Q685J3 4493 aa8.88□□□□□ -0.99
CHRFAM7A-202ENST00000397827 J3QL48 77 aa8.86□□□□□ -0.99
CHRFAM7A-202ENST00000397827 KRTAP12-2P59991 146 aa8.84□□□□□ -0.99
CHRFAM7A-202ENST00000397827 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
CHRFAM7A-202ENST00000397827 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
CHRFAM7A-202ENST00000397827 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
CHRFAM7A-202ENST00000397827 M0QZ58 72 aa8.74□□□□□ -1.01
CHRFAM7A-202ENST00000397827 MUC2Q02817 5179 aa8.71□□□□□ -1.02
CHRFAM7A-202ENST00000397827 R4GN34 69 aa8.63□□□□□ -1.03
CHRFAM7A-202ENST00000397827 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
CHRFAM7A-202ENST00000397827 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
CHRFAM7A-202ENST00000397827 KRTAP19-2Q3LHN2 52 aa8.6□□□□□ -1.03
CHRFAM7A-202ENST00000397827 HERC1Q15751 4861 aa8.54□□□□□ -1.04
CHRFAM7A-202ENST00000397827 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
CHRFAM7A-202ENST00000397827 PCLOQ9Y6V0 5065 aa8.49□□□□□ -1.05
CHRFAM7A-202ENST00000397827 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
CHRFAM7A-202ENST00000397827 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
CHRFAM7A-202ENST00000397827 FAT4Q6V0I7 4981 aa8.3□□□□□ -1.08
CHRFAM7A-202ENST00000397827 CAMK2N1Q7Z7J9 78 aa8.18□□□□□ -1.1
CHRFAM7A-202ENST00000397827 LCE2CQ5TA81 110 aa8.15□□□□□ -1.11
CHRFAM7A-202ENST00000397827 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
CHRFAM7A-202ENST00000397827 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
CHRFAM7A-202ENST00000397827 M0R2T5 61 aa7.99□□□□□ -1.13
CHRFAM7A-202ENST00000397827 PP632Q6XCG6 107 aa7.95□□□□□ -1.14
CHRFAM7A-202ENST00000397827 MT1HP80294 61 aa7.93□□□□□ -1.14
CHRFAM7A-202ENST00000397827 KRTAP19-1Q8IUB9 90 aa7.88□□□□□ -1.15
CHRFAM7A-202ENST00000397827 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
CHRFAM7A-202ENST00000397827 TNP1P09430 55 aa7.82□□□□□ -1.16
CHRFAM7A-202ENST00000397827 MT1FP04733 61 aa7.79□□□□□ -1.16
CHRFAM7A-202ENST00000397827 MT2AP02795 61 aa7.78□□□□□ -1.16
CHRFAM7A-202ENST00000397827 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
CHRFAM7A-202ENST00000397827 KRTAP9-8Q9BYQ0 159 aa7.74□□□□□ -1.17
CHRFAM7A-202ENST00000397827 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
CHRFAM7A-202ENST00000397827 SPRR5A0A1B0GTR4 108 aa7.71□□□□□ -1.18
CHRFAM7A-202ENST00000397827 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
CHRFAM7A-202ENST00000397827 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
CHRFAM7A-202ENST00000397827 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
CHRFAM7A-202ENST00000397827 MT1BP07438 61 aa7.48□□□□□ -1.21
CHRFAM7A-202ENST00000397827 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
CHRFAM7A-202ENST00000397827 INE1O15225 51 aa7.43□□□□□ -1.22
CHRFAM7A-202ENST00000397827 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
CHRFAM7A-202ENST00000397827 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
CHRFAM7A-202ENST00000397827 MT1XP80297 61 aa7.4□□□□□ -1.22
CHRFAM7A-202ENST00000397827 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
CHRFAM7A-202ENST00000397827 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
CHRFAM7A-202ENST00000397827 USH2AO75445 5202 aa7.22□□□□□ -1.25
CHRFAM7A-202ENST00000397827 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
CHRFAM7A-202ENST00000397827 LCE2BO14633 110 aa7.16□□□□□ -1.26
CHRFAM7A-202ENST00000397827 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
CHRFAM7A-202ENST00000397827 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
CHRFAM7A-202ENST00000397827 KMT2DO14686 5537 aa7.01□□□□□ -1.29
CHRFAM7A-202ENST00000397827 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
CHRFAM7A-202ENST00000397827 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
CHRFAM7A-202ENST00000397827 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
CHRFAM7A-202ENST00000397827 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
CHRFAM7A-202ENST00000397827 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.35
CHRFAM7A-202ENST00000397827 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
CHRFAM7A-202ENST00000397827 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
CHRFAM7A-202ENST00000397827 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
CHRFAM7A-202ENST00000397827 KRTAP9-6A8MVA2 160 aa6.46□□□□□ -1.37
CHRFAM7A-202ENST00000397827 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
CHRFAM7A-202ENST00000397827 MT1EP04732 61 aa6.4□□□□□ -1.38
CHRFAM7A-202ENST00000397827 MT1LQ93083 61 aa6.38□□□□□ -1.39
CHRFAM7A-202ENST00000397827 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
CHRFAM7A-202ENST00000397827 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
CHRFAM7A-202ENST00000397827 MUC12Q9UKN1 5478 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms