RNA–Protein interactions for RNA: ENST00000397786.6

MED13-201, Transcript of mediator complex subunit 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED13, Length 10,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-201ENST00000397786 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
MED13-201ENST00000397786 M0R2T5 61 aa2.62□□□□□ -1.99
MED13-201ENST00000397786 TPRXLQ17RH7 258 aa2.6□□□□□ -1.99
MED13-201ENST00000397786 KRTAP12-2P59991 146 aa2.58□□□□□ -2
MED13-201ENST00000397786 KRTAP10-6P60371 365 aaPredicted RBP2.57□□□□□ -2
MED13-201ENST00000397786 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
MED13-201ENST00000397786 A0A0A0MQY5 61 aa2.56□□□□□ -2
MED13-201ENST00000397786 FAT2Q9NYQ8 4349 aa2.56□□□□□ -2
MED13-201ENST00000397786 KRTAP12-1P59990 96 aa2.56□□□□□ -2
MED13-201ENST00000397786 PKHD1P08F94 4074 aa2.55□□□□□ -2
MED13-201ENST00000397786 PLAC4Q8WY50 150 aa2.55□□□□□ -2
MED13-201ENST00000397786 KRTAP3-3Q9BYR6 98 aa2.54□□□□□ -2
MED13-201ENST00000397786 KRTAP10-4P60372 401 aaPredicted RBP2.54□□□□□ -2
MED13-201ENST00000397786 DNHD1Q96M86 4753 aa2.53□□□□□ -2
MED13-201ENST00000397786 TNP1P09430 55 aa2.53□□□□□ -2
MED13-201ENST00000397786 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
MED13-201ENST00000397786 KRTAP3-2Q9BYR7 98 aa2.52□□□□□ -2.01
MED13-201ENST00000397786 DNAH5Q8TE73 4624 aa2.51□□□□□ -2.01
MED13-201ENST00000397786 LRP1BQ9NZR2 4599 aa2.49□□□□□ -2.01
MED13-201ENST00000397786 PKD1P98161 4303 aa2.49□□□□□ -2.01
MED13-201ENST00000397786 MT1HL1P0DM35 61 aa2.46□□□□□ -2.01
MED13-201ENST00000397786 FAT1Q14517 4588 aa2.44□□□□□ -2.02
MED13-201ENST00000397786 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
MED13-201ENST00000397786 KRTAP15-1Q3LI76 137 aa2.42□□□□□ -2.02
MED13-201ENST00000397786 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.03
MED13-201ENST00000397786 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
MED13-201ENST00000397786 KRTAP10-10P60014 251 aa2.38□□□□□ -2.03
MED13-201ENST00000397786 DYNC1H1Q14204 4646 aaKnown RBP2.38□□□□□ -2.03
MED13-201ENST00000397786 TNXBP22105 4242 aa2.37□□□□□ -2.03
MED13-201ENST00000397786 LRP1Q07954 4544 aaKnown RBP2.35□□□□□ -2.03
MED13-201ENST00000397786 KRTAP4-5Q9BYR2 181 aa2.35□□□□□ -2.03
MED13-201ENST00000397786 HSPG2P98160 4391 aa2.35□□□□□ -2.03
MED13-201ENST00000397786 APOBP04114 4563 aaKnown RBP2.34□□□□□ -2.03
MED13-201ENST00000397786 MYCBP2O75592 4640 aa2.34□□□□□ -2.04
MED13-201ENST00000397786 LORP23490 312 aaPredicted RBP2.33□□□□□ -2.04
MED13-201ENST00000397786 FAT3Q8TDW7 4589 aa2.31□□□□□ -2.04
MED13-201ENST00000397786 KMT2CQ8NEZ4 4911 aaKnown RBP2.31□□□□□ -2.04
MED13-201ENST00000397786 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
MED13-201ENST00000397786 KRTAP4-1Q9BYQ7 146 aa2.26□□□□□ -2.05
MED13-201ENST00000397786 KRTAP17-1Q9BYP8 105 aa2.25□□□□□ -2.05
MED13-201ENST00000397786 LPAP08519 4548 aa2.24□□□□□ -2.05
MED13-201ENST00000397786 FLGP20930 4061 aaPredicted RBP2.24□□□□□ -2.05
MED13-201ENST00000397786 KRTAP23-1A1A580 65 aa2.24□□□□□ -2.05
MED13-201ENST00000397786 LRP2P98164 4655 aa2.22□□□□□ -2.05
MED13-201ENST00000397786 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
MED13-201ENST00000397786 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
MED13-201ENST00000397786 RYR3Q15413 4870 aa2.15□□□□□ -2.06
MED13-201ENST00000397786 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
MED13-201ENST00000397786 SPRR2GQ9BYE4 73 aa2.13□□□□□ -2.07
MED13-201ENST00000397786 INE1O15225 51 aa2.12□□□□□ -2.07
MED13-201ENST00000397786 RYR1P21817 5038 aa2.1□□□□□ -2.07
MED13-201ENST00000397786 MT1HP80294 61 aa2.1□□□□□ -2.07
MED13-201ENST00000397786 RYR2Q92736 4967 aa2.08□□□□□ -2.08
MED13-201ENST00000397786 EPPK1P58107 5090 aaKnown RBP2.07□□□□□ -2.08
MED13-201ENST00000397786 MUC17Q685J3 4493 aa2.07□□□□□ -2.08
MED13-201ENST00000397786 MT2AP02795 61 aa2.07□□□□□ -2.08
MED13-201ENST00000397786 MT1FP04733 61 aa2.06□□□□□ -2.08
MED13-201ENST00000397786 KRTAP19-1Q8IUB9 90 aa2.05□□□□□ -2.08
MED13-201ENST00000397786 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
MED13-201ENST00000397786 KIAA1109Q2LD37 5005 aa2.02□□□□□ -2.09
MED13-201ENST00000397786 KRTAP8-1Q8IUC2 63 aa2.01□□□□□ -2.09
MED13-201ENST00000397786 LCE2CQ5TA81 110 aa1.99□□□□□ -2.09
MED13-201ENST00000397786 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
MED13-201ENST00000397786 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
MED13-201ENST00000397786 KRTAP9-8Q9BYQ0 159 aa1.97□□□□□ -2.09
MED13-201ENST00000397786 MT1XP80297 61 aa1.96□□□□□ -2.1
MED13-201ENST00000397786 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
MED13-201ENST00000397786 KRTAP10-7P60409 375 aaPredicted RBP1.96□□□□□ -2.1
MED13-201ENST00000397786 KRTAP10-5P60370 271 aa1.96□□□□□ -2.1
MED13-201ENST00000397786 HERC2O95714 4834 aa1.95□□□□□ -2.1
MED13-201ENST00000397786 LCE3CQ5T5A8 94 aa1.94□□□□□ -2.1
MED13-201ENST00000397786 MT1BP07438 61 aa1.94□□□□□ -2.1
MED13-201ENST00000397786 HERC1Q15751 4861 aa1.94□□□□□ -2.1
MED13-201ENST00000397786 MUC2Q02817 5179 aa1.93□□□□□ -2.1
MED13-201ENST00000397786 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
MED13-201ENST00000397786 ABCA13Q86UQ4 5058 aa1.92□□□□□ -2.1
MED13-201ENST00000397786 KRTAP9-3Q9BYQ3 159 aa1.89□□□□□ -2.11
MED13-201ENST00000397786 KRTAP4-8A0A0G2JLE6 195 aa1.84□□□□□ -2.12
MED13-201ENST00000397786 KRTAP4-8Q9BYQ9 185 aa1.84□□□□□ -2.12
MED13-201ENST00000397786 HMCN2Q8NDA2 5059 aa1.83□□□□□ -2.12
MED13-201ENST00000397786 KRTAP19-4Q3LI73 84 aa1.83□□□□□ -2.12
MED13-201ENST00000397786 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
MED13-201ENST00000397786 LCE2BO14633 110 aa1.81□□□□□ -2.12
MED13-201ENST00000397786 UBR4Q5T4S7 5183 aa1.78□□□□□ -2.12
MED13-201ENST00000397786 FAT4Q6V0I7 4981 aa1.77□□□□□ -2.13
MED13-201ENST00000397786 PCLOQ9Y6V0 5065 aa1.77□□□□□ -2.13
MED13-201ENST00000397786 KRTAP4-7Q9BYR0 210 aa1.75□□□□□ -2.13
MED13-201ENST00000397786 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
MED13-201ENST00000397786 MT1GP13640 62 aa1.74□□□□□ -2.13
MED13-201ENST00000397786 MT1LQ93083 61 aa1.73□□□□□ -2.13
MED13-201ENST00000397786 MT1EP04732 61 aa1.72□□□□□ -2.13
MED13-201ENST00000397786 RNF213Q63HN8 5207 aa1.71□□□□□ -2.14
MED13-201ENST00000397786 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
MED13-201ENST00000397786 LCE3BQ5TA77 95 aa1.7□□□□□ -2.14
MED13-201ENST00000397786 KRTAP19-7Q3SYF9 63 aa1.69□□□□□ -2.14
MED13-201ENST00000397786 LCE2AQ5TA79 106 aaPredicted RBP1.67□□□□□ -2.14
MED13-201ENST00000397786 KRTAP19-3Q7Z4W3 81 aa1.67□□□□□ -2.14
MED13-201ENST00000397786 LOC100996750A0A140TA64 210 aa1.66□□□□□ -2.14
MED13-201ENST00000397786 KRTAP9-6A8MVA2 160 aa1.66□□□□□ -2.14
MED13-201ENST00000397786 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms