RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 DNAL4O96015 105 aa4.53□□□□□ -1.68
NEDD9-203ENST00000397378 A0A087WSZ3 146 aa4.52□□□□□ -1.69
NEDD9-203ENST00000397378 A8MWP4 228 aa4.52□□□□□ -1.69
NEDD9-203ENST00000397378 hDV103S1A0JD37 113 aa4.51□□□□□ -1.69
NEDD9-203ENST00000397378 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
NEDD9-203ENST00000397378 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
NEDD9-203ENST00000397378 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
NEDD9-203ENST00000397378 TRBV7-4A0A0J9YYF1 115 aa4.47□□□□□ -1.69
NEDD9-203ENST00000397378 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
NEDD9-203ENST00000397378 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
NEDD9-203ENST00000397378 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
NEDD9-203ENST00000397378 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.7
NEDD9-203ENST00000397378 HCG22E2RYF7 251 aa4.46□□□□□ -1.7
NEDD9-203ENST00000397378 BAALC-AS2P0C853 105 aa4.46□□□□□ -1.7
NEDD9-203ENST00000397378 IGKV4-1P06312 121 aa4.45□□□□□ -1.7
NEDD9-203ENST00000397378 A0A087WVE0 104 aa4.44□□□□□ -1.7
NEDD9-203ENST00000397378 Q5VV11 94 aa4.44□□□□□ -1.7
NEDD9-203ENST00000397378 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
NEDD9-203ENST00000397378 A0A1W2PNM2 257 aa4.43□□□□□ -1.7
NEDD9-203ENST00000397378 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
NEDD9-203ENST00000397378 UBL5Q9BZL1 73 aa4.43□□□□□ -1.7
NEDD9-203ENST00000397378 LOC101927531A0A1B0GV80 90 aa4.42□□□□□ -1.7
NEDD9-203ENST00000397378 SPINK7P58062 85 aa4.42□□□□□ -1.7
NEDD9-203ENST00000397378 SPTSSBQ8NFR3 76 aa4.42□□□□□ -1.7
NEDD9-203ENST00000397378 JMJD7-PLA2G4BH0Y9G9 81 aa4.41□□□□□ -1.7
NEDD9-203ENST00000397378 SPRR2EP22531 72 aa4.41□□□□□ -1.7
NEDD9-203ENST00000397378 SPRR2BP35325 72 aa4.41□□□□□ -1.7
NEDD9-203ENST00000397378 SPRR2AP35326 72 aa4.41□□□□□ -1.7
NEDD9-203ENST00000397378 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
NEDD9-203ENST00000397378 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
NEDD9-203ENST00000397378 CHKB-CPT1BH3BT56 60 aa4.4□□□□□ -1.71
NEDD9-203ENST00000397378 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
NEDD9-203ENST00000397378 H0YGX0 51 aa4.39□□□□□ -1.71
NEDD9-203ENST00000397378 KRTAP9-9Q9BYP9 154 aa4.39□□□□□ -1.71
NEDD9-203ENST00000397378 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
NEDD9-203ENST00000397378 DEFB116Q30KQ4 102 aa4.38□□□□□ -1.71
NEDD9-203ENST00000397378 CASC2Q6XLA1 102 aa4.38□□□□□ -1.71
NEDD9-203ENST00000397378 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
NEDD9-203ENST00000397378 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
NEDD9-203ENST00000397378 NDUFB1O75438 58 aa4.36□□□□□ -1.71
NEDD9-203ENST00000397378 NREPQ16612 68 aa4.36□□□□□ -1.71
NEDD9-203ENST00000397378 C1orf64Q8NEQ6 169 aa4.36□□□□□ -1.71
NEDD9-203ENST00000397378 A0A1B0GVX0 72 aa4.35□□□□□ -1.71
NEDD9-203ENST00000397378 PDE6GP18545 87 aa4.35□□□□□ -1.71
NEDD9-203ENST00000397378 A6NED7 52 aa4.34□□□□□ -1.71
NEDD9-203ENST00000397378 H3BQ85 93 aa4.34□□□□□ -1.71
NEDD9-203ENST00000397378 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
NEDD9-203ENST00000397378 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
NEDD9-203ENST00000397378 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
NEDD9-203ENST00000397378 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
NEDD9-203ENST00000397378 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
NEDD9-203ENST00000397378 C14orf132Q9NPU4 83 aa4.3□□□□□ -1.72
NEDD9-203ENST00000397378 BPY2O14599 106 aa4.29□□□□□ -1.72
NEDD9-203ENST00000397378 MT1BP07438 61 aa4.29□□□□□ -1.72
NEDD9-203ENST00000397378 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
NEDD9-203ENST00000397378 OCR1Q9BZK8 76 aa4.29□□□□□ -1.72
NEDD9-203ENST00000397378 LOC110117498A0A087WWA1 95 aa4.28□□□□□ -1.72
NEDD9-203ENST00000397378 ORMDL1Q9P0S3 153 aa4.28□□□□□ -1.72
NEDD9-203ENST00000397378 SPRR2DP22532 72 aa4.27□□□□□ -1.73
NEDD9-203ENST00000397378 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
NEDD9-203ENST00000397378 ROMO1P60602 79 aa4.26□□□□□ -1.73
NEDD9-203ENST00000397378 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
NEDD9-203ENST00000397378 A8MU10 97 aa4.24□□□□□ -1.73
NEDD9-203ENST00000397378 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
NEDD9-203ENST00000397378 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
NEDD9-203ENST00000397378 C8orf17Q9NRJ1 99 aa4.23□□□□□ -1.73
NEDD9-203ENST00000397378 H3BPC8 53 aa4.22□□□□□ -1.73
NEDD9-203ENST00000397378 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
NEDD9-203ENST00000397378 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
NEDD9-203ENST00000397378 K7ERS5 55 aa4.19□□□□□ -1.74
NEDD9-203ENST00000397378 Q6ZQT0 140 aa4.19□□□□□ -1.74
NEDD9-203ENST00000397378 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
NEDD9-203ENST00000397378 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
NEDD9-203ENST00000397378 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
NEDD9-203ENST00000397378 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
NEDD9-203ENST00000397378 MRPL34Q9BQ48 92 aaKnown RBP4.14□□□□□ -1.75
NEDD9-203ENST00000397378 KRTAP8-1Q8IUC2 63 aa4.13□□□□□ -1.75
NEDD9-203ENST00000397378 IGKV2D-30A0A075B6S6 120 aa4.12□□□□□ -1.75
NEDD9-203ENST00000397378 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
NEDD9-203ENST00000397378 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
NEDD9-203ENST00000397378 H0Y9P7 68 aa4.11□□□□□ -1.75
NEDD9-203ENST00000397378 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
NEDD9-203ENST00000397378 CSAG1Q6PB30 78 aa4.1□□□□□ -1.75
NEDD9-203ENST00000397378 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
NEDD9-203ENST00000397378 Q5W150 140 aa4.08□□□□□ -1.76
NEDD9-203ENST00000397378 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
NEDD9-203ENST00000397378 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
NEDD9-203ENST00000397378 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
NEDD9-203ENST00000397378 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
NEDD9-203ENST00000397378 S4R3F8 94 aa4.06□□□□□ -1.76
NEDD9-203ENST00000397378 COA5Q86WW8 74 aa4.05□□□□□ -1.76
NEDD9-203ENST00000397378 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
NEDD9-203ENST00000397378 UQCR11O14957 56 aa4.04□□□□□ -1.76
NEDD9-203ENST00000397378 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
NEDD9-203ENST00000397378 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
NEDD9-203ENST00000397378 K7EQZ3 153 aa4.02□□□□□ -1.77
NEDD9-203ENST00000397378 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
NEDD9-203ENST00000397378 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
NEDD9-203ENST00000397378 P0C880 135 aa4.01□□□□□ -1.77
NEDD9-203ENST00000397378 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms