RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LRP1Q07954 4544 aaKnown RBP12.57□□□□□ -0.4
CSNK1E-203ENST00000396832 MYCBP2O75592 4640 aa12.53□□□□□ -0.4
CSNK1E-203ENST00000396832 RPL37P61927 97 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-203ENST00000396832 KRTAP10-4P60372 401 aaPredicted RBP12.49□□□□□ -0.41
CSNK1E-203ENST00000396832 HSPG2P98160 4391 aa12.48□□□□□ -0.41
CSNK1E-203ENST00000396832 A0A1B0GVY2 172 aa12.46□□□□□ -0.41
CSNK1E-203ENST00000396832 A0A0D9SG42 100 aa12.45□□□□□ -0.42
CSNK1E-203ENST00000396832 TPRXLQ17RH7 258 aa12.44□□□□□ -0.42
CSNK1E-203ENST00000396832 KRTAP10-6P60371 365 aaPredicted RBP12.44□□□□□ -0.42
CSNK1E-203ENST00000396832 KRTAP13-4Q3LI77 160 aa12.43□□□□□ -0.42
CSNK1E-203ENST00000396832 SPINT4Q6UDR6 99 aa12.43□□□□□ -0.42
CSNK1E-203ENST00000396832 FAT3Q8TDW7 4589 aa12.35□□□□□ -0.43
CSNK1E-203ENST00000396832 KRTAP3-3Q9BYR6 98 aa12.33□□□□□ -0.44
CSNK1E-203ENST00000396832 C10orf95Q9H7T3 257 aa12.32□□□□□ -0.44
CSNK1E-203ENST00000396832 KRTAP3-2Q9BYR7 98 aa12.29□□□□□ -0.44
CSNK1E-203ENST00000396832 KRTAP10-8P60410 259 aa12.27□□□□□ -0.44
CSNK1E-203ENST00000396832 TNXBP22105 4242 aa12.27□□□□□ -0.45
CSNK1E-203ENST00000396832 KIAA1109Q2LD37 5005 aa12.24□□□□□ -0.45
CSNK1E-203ENST00000396832 EPPK1P58107 5090 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-203ENST00000396832 LPAP08519 4548 aa12.16□□□□□ -0.46
CSNK1E-203ENST00000396832 KRTAP15-1Q3LI76 137 aa12.16□□□□□ -0.46
CSNK1E-203ENST00000396832 NDUFAF8A1L188 74 aa12.14□□□□□ -0.47
CSNK1E-203ENST00000396832 S4R3F8 94 aa12.13□□□□□ -0.47
CSNK1E-203ENST00000396832 KRTAP17-1Q9BYP8 105 aa12.1□□□□□ -0.47
CSNK1E-203ENST00000396832 KRTAP12-2P59991 146 aa12.08□□□□□ -0.48
CSNK1E-203ENST00000396832 XP32Q5T750 250 aa12.08□□□□□ -0.48
CSNK1E-203ENST00000396832 RYR1P21817 5038 aa12.04□□□□□ -0.48
CSNK1E-203ENST00000396832 Q5VSD8 79 aa12.03□□□□□ -0.48
CSNK1E-203ENST00000396832 KRTAP12-1P59990 96 aa11.93□□□□□ -0.5
CSNK1E-203ENST00000396832 LRP2P98164 4655 aa11.92□□□□□ -0.5
CSNK1E-203ENST00000396832 KRTAP4-5Q9BYR2 181 aa11.68□□□□□ -0.54
CSNK1E-203ENST00000396832 M0QZ58 72 aa11.67□□□□□ -0.54
CSNK1E-203ENST00000396832 ABCA13Q86UQ4 5058 aa11.64□□□□□ -0.55
CSNK1E-203ENST00000396832 MT1HL1P0DM35 61 aa11.62□□□□□ -0.55
CSNK1E-203ENST00000396832 HERC2O95714 4834 aa11.38□□□□□ -0.59
CSNK1E-203ENST00000396832 PLAC4Q8WY50 150 aa11.36□□□□□ -0.59
CSNK1E-203ENST00000396832 R4GN34 69 aa11.35□□□□□ -0.59
CSNK1E-203ENST00000396832 LORP23490 312 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-203ENST00000396832 J3QL48 77 aa11.13□□□□□ -0.63
CSNK1E-203ENST00000396832 MUC17Q685J3 4493 aa11.13□□□□□ -0.63
CSNK1E-203ENST00000396832 BIRC6Q9NR09 4857 aa11.13□□□□□ -0.63
CSNK1E-203ENST00000396832 MUC2Q02817 5179 aa11.13□□□□□ -0.63
CSNK1E-203ENST00000396832 LUZP6Q538Z0 58 aa11.1□□□□□ -0.63
CSNK1E-203ENST00000396832 PCLOQ9Y6V0 5065 aa11.08□□□□□ -0.63
CSNK1E-203ENST00000396832 A0A0A0MQY5 61 aa11.07□□□□□ -0.64
CSNK1E-203ENST00000396832 HERC1Q15751 4861 aa11.07□□□□□ -0.64
CSNK1E-203ENST00000396832 KRTAP4-1Q9BYQ7 146 aa11.06□□□□□ -0.64
CSNK1E-203ENST00000396832 SEC61BP60468 96 aaKnown RBP10.93□□□□□ -0.66
CSNK1E-203ENST00000396832 PP632Q6XCG6 107 aa10.91□□□□□ -0.66
CSNK1E-203ENST00000396832 CAMK2N1Q7Z7J9 78 aa10.85□□□□□ -0.67
CSNK1E-203ENST00000396832 KRTAP19-2Q3LHN2 52 aa10.67□□□□□ -0.7
CSNK1E-203ENST00000396832 HMCN2Q8NDA2 5059 aa10.59□□□□□ -0.71
CSNK1E-203ENST00000396832 RNF213Q63HN8 5207 aa10.58□□□□□ -0.72
CSNK1E-203ENST00000396832 FAT4Q6V0I7 4981 aa10.53□□□□□ -0.72
CSNK1E-203ENST00000396832 FLGP20930 4061 aaPredicted RBP10.53□□□□□ -0.72
CSNK1E-203ENST00000396832 UBR4Q5T4S7 5183 aa10.49□□□□□ -0.73
CSNK1E-203ENST00000396832 TNP1P09430 55 aa10.46□□□□□ -0.74
CSNK1E-203ENST00000396832 SPRR5A0A1B0GTR4 108 aa10.41□□□□□ -0.74
CSNK1E-203ENST00000396832 KRTAP23-1A1A580 65 aa10.36□□□□□ -0.75
CSNK1E-203ENST00000396832 M0R2T5 61 aa10.03□□□□□ -0.8
CSNK1E-203ENST00000396832 LCE2CQ5TA81 110 aa9.97□□□□□ -0.81
CSNK1E-203ENST00000396832 KRTAP19-1Q8IUB9 90 aa9.95□□□□□ -0.82
CSNK1E-203ENST00000396832 LCE3AQ5TA76 89 aa9.88□□□□□ -0.83
CSNK1E-203ENST00000396832 SPRR2GQ9BYE4 73 aa9.86□□□□□ -0.83
CSNK1E-203ENST00000396832 PRO2289Q9P1D8 64 aa9.84□□□□□ -0.83
CSNK1E-203ENST00000396832 KRTAP10-10P60014 251 aa9.78□□□□□ -0.84
CSNK1E-203ENST00000396832 MT1FP04733 61 aa9.74□□□□□ -0.85
CSNK1E-203ENST00000396832 MT1HP80294 61 aa9.73□□□□□ -0.85
CSNK1E-203ENST00000396832 MT2AP02795 61 aa9.65□□□□□ -0.86
CSNK1E-203ENST00000396832 INE1O15225 51 aa9.64□□□□□ -0.87
CSNK1E-203ENST00000396832 KRTAP8-1Q8IUC2 63 aa9.55□□□□□ -0.88
CSNK1E-203ENST00000396832 KRTAP9-8Q9BYQ0 159 aa9.51□□□□□ -0.89
CSNK1E-203ENST00000396832 KRTAP10-5P60370 271 aa9.42□□□□□ -0.9
CSNK1E-203ENST00000396832 MT1XP80297 61 aa9.41□□□□□ -0.9
CSNK1E-203ENST00000396832 MT1BP07438 61 aa9.39□□□□□ -0.91
CSNK1E-203ENST00000396832 KRTAP12-3P60328 96 aa9.35□□□□□ -0.91
CSNK1E-203ENST00000396832 KRTAP10-12P60413 245 aa9.33□□□□□ -0.92
CSNK1E-203ENST00000396832 KRTAP19-8Q3LI54 63 aa9.32□□□□□ -0.92
CSNK1E-203ENST00000396832 KRTAP10-7P60409 375 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-203ENST00000396832 USH2AO75445 5202 aa9.28□□□□□ -0.92
CSNK1E-203ENST00000396832 KMT2DO14686 5537 aa9.26□□□□□ -0.93
CSNK1E-203ENST00000396832 KRTAP9-3Q9BYQ3 159 aa9.06□□□□□ -0.96
CSNK1E-203ENST00000396832 FSIP2Q5CZC0 6907 aa9.01□□□□□ -0.97
CSNK1E-203ENST00000396832 KRTAP19-5Q3LI72 72 aa8.91□□□□□ -0.98
CSNK1E-203ENST00000396832 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
CSNK1E-203ENST00000396832 LCE2BO14633 110 aa8.84□□□□□ -1
CSNK1E-203ENST00000396832 LCE3CQ5T5A8 94 aa8.83□□□□□ -1
CSNK1E-203ENST00000396832 KRTAP4-8A0A0G2JLE6 195 aa8.78□□□□□ -1
CSNK1E-203ENST00000396832 KRTAP4-8Q9BYQ9 185 aa8.78□□□□□ -1
CSNK1E-203ENST00000396832 KRTAP9-6A8MVA2 160 aa8.61□□□□□ -1.03
CSNK1E-203ENST00000396832 KRTAP4-7Q9BYR0 210 aa8.6□□□□□ -1.03
CSNK1E-203ENST00000396832 SSPOA2VEC9 5147 aa8.48□□□□□ -1.05
CSNK1E-203ENST00000396832 KRTAP2-3P0C7H8 128 aa8.46□□□□□ -1.06
CSNK1E-203ENST00000396832 KRTAP2-4Q9BYR9 128 aa8.46□□□□□ -1.06
CSNK1E-203ENST00000396832 KRTAP2-1Q9BYU5 128 aa8.46□□□□□ -1.06
CSNK1E-203ENST00000396832 KRTAP19-7Q3SYF9 63 aa8.37□□□□□ -1.07
CSNK1E-203ENST00000396832 MT1LQ93083 61 aa8.13□□□□□ -1.11
CSNK1E-203ENST00000396832 MT1EP04732 61 aa8.07□□□□□ -1.12
CSNK1E-203ENST00000396832 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
CSNK1E-203ENST00000396832 FCGBPQ9Y6R7 5405 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms