RNA–Protein interactions for RNA: ENST00000396280.9

TRPM3-211, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,671 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-211ENST00000396280 KRTAP3-2Q9BYR7 98 aa4.65□□□□□ -1.66
TRPM3-211ENST00000396280 DNAH2Q9P225 4427 aa4.63□□□□□ -1.67
TRPM3-211ENST00000396280 ALMS1Q8TCU4 4167 aa4.62□□□□□ -1.67
TRPM3-211ENST00000396280 DYNC2H1Q8NCM8 4307 aaKnown RBP4.6□□□□□ -1.67
TRPM3-211ENST00000396280 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
TRPM3-211ENST00000396280 DNAH5Q8TE73 4624 aa4.58□□□□□ -1.68
TRPM3-211ENST00000396280 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
TRPM3-211ENST00000396280 TNP1P09430 55 aa4.55□□□□□ -1.68
TRPM3-211ENST00000396280 LYSTQ99698 3801 aa4.54□□□□□ -1.68
TRPM3-211ENST00000396280 KMT2AQ03164 3969 aa4.53□□□□□ -1.68
TRPM3-211ENST00000396280 MT1HL1P0DM35 61 aa4.53□□□□□ -1.68
TRPM3-211ENST00000396280 PRKDCP78527 4128 aaKnown RBP4.52□□□□□ -1.69
TRPM3-211ENST00000396280 HECTD4Q9Y4D8 3996 aa4.51□□□□□ -1.69
TRPM3-211ENST00000396280 DNAH7Q8WXX0 4024 aa4.49□□□□□ -1.69
TRPM3-211ENST00000396280 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
TRPM3-211ENST00000396280 DYNC1H1Q14204 4646 aaKnown RBP4.46□□□□□ -1.7
TRPM3-211ENST00000396280 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
TRPM3-211ENST00000396280 SACSQ9NZJ4 4579 aa4.43□□□□□ -1.7
TRPM3-211ENST00000396280 FAT1Q14517 4588 aa4.43□□□□□ -1.7
TRPM3-211ENST00000396280 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
TRPM3-211ENST00000396280 DNHD1Q96M86 4753 aa4.41□□□□□ -1.7
TRPM3-211ENST00000396280 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.71
TRPM3-211ENST00000396280 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
TRPM3-211ENST00000396280 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
TRPM3-211ENST00000396280 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
TRPM3-211ENST00000396280 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
TRPM3-211ENST00000396280 KRTAP10-10P60014 251 aa4.25□□□□□ -1.73
TRPM3-211ENST00000396280 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
TRPM3-211ENST00000396280 APOBP04114 4563 aaKnown RBP4.22□□□□□ -1.73
TRPM3-211ENST00000396280 PKD1P98161 4303 aa4.2□□□□□ -1.74
TRPM3-211ENST00000396280 FAT3Q8TDW7 4589 aa4.18□□□□□ -1.74
TRPM3-211ENST00000396280 MYCBP2O75592 4640 aa4.18□□□□□ -1.74
TRPM3-211ENST00000396280 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
TRPM3-211ENST00000396280 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
TRPM3-211ENST00000396280 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
TRPM3-211ENST00000396280 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
TRPM3-211ENST00000396280 RYR1P21817 5038 aa4.11□□□□□ -1.75
TRPM3-211ENST00000396280 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
TRPM3-211ENST00000396280 KIAA1109Q2LD37 5005 aa4.08□□□□□ -1.76
TRPM3-211ENST00000396280 PKHD1L1Q86WI1 4243 aa4.07□□□□□ -1.76
TRPM3-211ENST00000396280 RYR2Q92736 4967 aa4.07□□□□□ -1.76
TRPM3-211ENST00000396280 RYR3Q15413 4870 aa4.02□□□□□ -1.77
TRPM3-211ENST00000396280 LRP2P98164 4655 aa3.99□□□□□ -1.77
TRPM3-211ENST00000396280 HSPG2P98160 4391 aa3.98□□□□□ -1.77
TRPM3-211ENST00000396280 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
TRPM3-211ENST00000396280 TNXBP22105 4242 aa3.95□□□□□ -1.78
TRPM3-211ENST00000396280 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
TRPM3-211ENST00000396280 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
TRPM3-211ENST00000396280 KMT2CQ8NEZ4 4911 aaKnown RBP3.91□□□□□ -1.78
TRPM3-211ENST00000396280 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
TRPM3-211ENST00000396280 INE1O15225 51 aa3.88□□□□□ -1.79
TRPM3-211ENST00000396280 MT1HP80294 61 aa3.82□□□□□ -1.8
TRPM3-211ENST00000396280 LPAP08519 4548 aa3.81□□□□□ -1.8
TRPM3-211ENST00000396280 MT2AP02795 61 aa3.81□□□□□ -1.8
TRPM3-211ENST00000396280 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
TRPM3-211ENST00000396280 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
TRPM3-211ENST00000396280 MT1FP04733 61 aa3.77□□□□□ -1.81
TRPM3-211ENST00000396280 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
TRPM3-211ENST00000396280 HERC2O95714 4834 aa3.75□□□□□ -1.81
TRPM3-211ENST00000396280 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
TRPM3-211ENST00000396280 BIRC6Q9NR09 4857 aa3.7□□□□□ -1.82
TRPM3-211ENST00000396280 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
TRPM3-211ENST00000396280 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
TRPM3-211ENST00000396280 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
TRPM3-211ENST00000396280 FLGP20930 4061 aaPredicted RBP3.64□□□□□ -1.83
TRPM3-211ENST00000396280 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
TRPM3-211ENST00000396280 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
TRPM3-211ENST00000396280 MT1XP80297 61 aa3.6□□□□□ -1.83
TRPM3-211ENST00000396280 HERC1Q15751 4861 aa3.6□□□□□ -1.83
TRPM3-211ENST00000396280 MT1BP07438 61 aa3.59□□□□□ -1.83
TRPM3-211ENST00000396280 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.83
TRPM3-211ENST00000396280 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
TRPM3-211ENST00000396280 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
TRPM3-211ENST00000396280 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
TRPM3-211ENST00000396280 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
TRPM3-211ENST00000396280 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
TRPM3-211ENST00000396280 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
TRPM3-211ENST00000396280 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
TRPM3-211ENST00000396280 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
TRPM3-211ENST00000396280 MUC2Q02817 5179 aa3.38□□□□□ -1.87
TRPM3-211ENST00000396280 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
TRPM3-211ENST00000396280 RNF213Q63HN8 5207 aa3.34□□□□□ -1.87
TRPM3-211ENST00000396280 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.88
TRPM3-211ENST00000396280 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.88
TRPM3-211ENST00000396280 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
TRPM3-211ENST00000396280 LCE2BO14633 110 aa3.31□□□□□ -1.88
TRPM3-211ENST00000396280 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
TRPM3-211ENST00000396280 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
TRPM3-211ENST00000396280 MT1LQ93083 61 aa3.19□□□□□ -1.9
TRPM3-211ENST00000396280 MT1EP04732 61 aa3.17□□□□□ -1.9
TRPM3-211ENST00000396280 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
TRPM3-211ENST00000396280 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
TRPM3-211ENST00000396280 MT1GP13640 62 aa3.14□□□□□ -1.91
TRPM3-211ENST00000396280 LCE2AQ5TA79 106 aaPredicted RBP3.1□□□□□ -1.91
TRPM3-211ENST00000396280 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
TRPM3-211ENST00000396280 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
TRPM3-211ENST00000396280 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
TRPM3-211ENST00000396280 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
TRPM3-211ENST00000396280 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
TRPM3-211ENST00000396280 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms