RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.9
TRPS1-203ENST00000395715 AKAP9Q99996 3911 aa3.19□□□□□ -1.9
TRPS1-203ENST00000395715 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
TRPS1-203ENST00000395715 CSMD2Q7Z408 3487 aa3.17□□□□□ -1.9
TRPS1-203ENST00000395715 ANK3Q12955 4377 aaKnown RBP3.16□□□□□ -1.9
TRPS1-203ENST00000395715 HUWE1Q7Z6Z7 4374 aaKnown RBP3.14□□□□□ -1.91
TRPS1-203ENST00000395715 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.92
TRPS1-203ENST00000395715 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
TRPS1-203ENST00000395715 DNAH1Q9P2D7 4330 aa3.04□□□□□ -1.92
TRPS1-203ENST00000395715 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
TRPS1-203ENST00000395715 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
TRPS1-203ENST00000395715 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
TRPS1-203ENST00000395715 SPRR2EP22531 72 aa2.97□□□□□ -1.93
TRPS1-203ENST00000395715 SPRR2BP35325 72 aa2.97□□□□□ -1.93
TRPS1-203ENST00000395715 SPRR2AP35326 72 aa2.97□□□□□ -1.93
TRPS1-203ENST00000395715 MT1HP80294 61 aa2.97□□□□□ -1.93
TRPS1-203ENST00000395715 ZNF469Q96JG9 3925 aaPredicted RBP2.96□□□□□ -1.94
TRPS1-203ENST00000395715 CMYA5Q8N3K9 4069 aa2.95□□□□□ -1.94
TRPS1-203ENST00000395715 DNAH2Q9P225 4427 aa2.95□□□□□ -1.94
TRPS1-203ENST00000395715 DNAH7Q8WXX0 4024 aa2.94□□□□□ -1.94
TRPS1-203ENST00000395715 DNAH3Q8TD57 4116 aa2.93□□□□□ -1.94
TRPS1-203ENST00000395715 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
TRPS1-203ENST00000395715 MT3P25713 68 aa2.93□□□□□ -1.94
TRPS1-203ENST00000395715 FRAS1Q86XX4 4008 aa2.89□□□□□ -1.95
TRPS1-203ENST00000395715 ANK2Q01484 3957 aa2.88□□□□□ -1.95
TRPS1-203ENST00000395715 SPRR2DP22532 72 aa2.87□□□□□ -1.95
TRPS1-203ENST00000395715 LYSTQ99698 3801 aa2.87□□□□□ -1.95
TRPS1-203ENST00000395715 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
TRPS1-203ENST00000395715 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
TRPS1-203ENST00000395715 MT2AP02795 61 aa2.86□□□□□ -1.95
TRPS1-203ENST00000395715 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
TRPS1-203ENST00000395715 KMT2AQ03164 3969 aa2.83□□□□□ -1.96
TRPS1-203ENST00000395715 VPS13BQ7Z7G8 4022 aa2.82□□□□□ -1.96
TRPS1-203ENST00000395715 LCE2BO14633 110 aa2.82□□□□□ -1.96
TRPS1-203ENST00000395715 MT1FP04733 61 aa2.8□□□□□ -1.96
TRPS1-203ENST00000395715 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
TRPS1-203ENST00000395715 HECTD4Q9Y4D8 3996 aa2.8□□□□□ -1.96
TRPS1-203ENST00000395715 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
TRPS1-203ENST00000395715 DNAH9Q9NYC9 4486 aa2.79□□□□□ -1.96
TRPS1-203ENST00000395715 DNAH6Q9C0G6 4158 aa2.79□□□□□ -1.96
TRPS1-203ENST00000395715 MT1GP13640 62 aa2.77□□□□□ -1.97
TRPS1-203ENST00000395715 PRKDCP78527 4128 aaKnown RBP2.71□□□□□ -1.98
TRPS1-203ENST00000395715 DNAH8Q96JB1 4490 aa2.71□□□□□ -1.98
TRPS1-203ENST00000395715 PRM1P04553 51 aa2.7□□□□□ -1.98
TRPS1-203ENST00000395715 LCE2CQ5TA81 110 aa2.68□□□□□ -1.98
TRPS1-203ENST00000395715 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
TRPS1-203ENST00000395715 DNAH10Q8IVF4 4471 aa2.67□□□□□ -1.98
TRPS1-203ENST00000395715 VPS13DQ5THJ4 4388 aa2.67□□□□□ -1.98
TRPS1-203ENST00000395715 DNAH17Q9UFH2 4485 aa2.67□□□□□ -1.98
TRPS1-203ENST00000395715 DYNC2H1Q8NCM8 4307 aaKnown RBP2.66□□□□□ -1.98
TRPS1-203ENST00000395715 LCE2DQ5TA82 110 aaPredicted RBP2.64□□□□□ -1.99
TRPS1-203ENST00000395715 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
TRPS1-203ENST00000395715 MT4P47944 62 aa2.6□□□□□ -1.99
TRPS1-203ENST00000395715 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -1.99
TRPS1-203ENST00000395715 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
TRPS1-203ENST00000395715 KRTAP4-8A0A0G2JLE6 195 aa2.54□□□□□ -2
TRPS1-203ENST00000395715 KRTAP4-8Q9BYQ9 185 aa2.54□□□□□ -2
TRPS1-203ENST00000395715 MT1XP80297 61 aa2.53□□□□□ -2
TRPS1-203ENST00000395715 KRTAP19-8Q3LI54 63 aa2.51□□□□□ -2.01
TRPS1-203ENST00000395715 DNAH5Q8TE73 4624 aa2.51□□□□□ -2.01
TRPS1-203ENST00000395715 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
TRPS1-203ENST00000395715 PLECQ15149 4684 aaKnown RBP2.5□□□□□ -2.01
TRPS1-203ENST00000395715 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
TRPS1-203ENST00000395715 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
TRPS1-203ENST00000395715 LRP1BQ9NZR2 4599 aa2.49□□□□□ -2.01
TRPS1-203ENST00000395715 LCE1DQ5T752 114 aa2.47□□□□□ -2.01
TRPS1-203ENST00000395715 MT1LQ93083 61 aa2.47□□□□□ -2.01
TRPS1-203ENST00000395715 PKD1P98161 4303 aa2.46□□□□□ -2.02
TRPS1-203ENST00000395715 FAT1Q14517 4588 aa2.45□□□□□ -2.02
TRPS1-203ENST00000395715 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
TRPS1-203ENST00000395715 PKHD1P08F94 4074 aa2.43□□□□□ -2.02
TRPS1-203ENST00000395715 MT1BP07438 61 aa2.43□□□□□ -2.02
TRPS1-203ENST00000395715 KRTAP9-8Q9BYQ0 159 aa2.42□□□□□ -2.02
TRPS1-203ENST00000395715 RYR1P21817 5038 aa2.42□□□□□ -2.02
TRPS1-203ENST00000395715 KRTAP17-1Q9BYP8 105 aa2.41□□□□□ -2.02
TRPS1-203ENST00000395715 LRP1Q07954 4544 aaKnown RBP2.4□□□□□ -2.03
TRPS1-203ENST00000395715 KRTAP4-7Q9BYR0 210 aa2.4□□□□□ -2.03
TRPS1-203ENST00000395715 KRTAP9-2Q9BYQ4 174 aa2.38□□□□□ -2.03
TRPS1-203ENST00000395715 APOBP04114 4563 aaKnown RBP2.38□□□□□ -2.03
TRPS1-203ENST00000395715 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
TRPS1-203ENST00000395715 KRTAP9-3Q9BYQ3 159 aa2.38□□□□□ -2.03
TRPS1-203ENST00000395715 FAT3Q8TDW7 4589 aa2.38□□□□□ -2.03
TRPS1-203ENST00000395715 TNXBP22105 4242 aa2.35□□□□□ -2.03
TRPS1-203ENST00000395715 DYNC1H1Q14204 4646 aaKnown RBP2.34□□□□□ -2.03
TRPS1-203ENST00000395715 SACSQ9NZJ4 4579 aa2.34□□□□□ -2.04
TRPS1-203ENST00000395715 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
TRPS1-203ENST00000395715 LOC100996750A0A140TA64 210 aa2.32□□□□□ -2.04
TRPS1-203ENST00000395715 LPAP08519 4548 aa2.32□□□□□ -2.04
TRPS1-203ENST00000395715 MT1EP04732 61 aa2.31□□□□□ -2.04
TRPS1-203ENST00000395715 HSPG2P98160 4391 aa2.31□□□□□ -2.04
TRPS1-203ENST00000395715 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
TRPS1-203ENST00000395715 KRTAP9-6A0A140TA67 174 aa2.28□□□□□ -2.04
TRPS1-203ENST00000395715 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
TRPS1-203ENST00000395715 MT1MQ8N339 61 aa2.28□□□□□ -2.05
TRPS1-203ENST00000395715 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
TRPS1-203ENST00000395715 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
TRPS1-203ENST00000395715 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
TRPS1-203ENST00000395715 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
TRPS1-203ENST00000395715 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
TRPS1-203ENST00000395715 KRTAP4-9Q9BYQ8 210 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms