RNA–Protein interactions for RNA: ENST00000395423.7

TCF3-203, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 2,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-203ENST00000395423 RPS29P62273 56 aaKnown RBP11.58□□□□□ -0.56
TCF3-203ENST00000395423 TPRXLQ17RH7 258 aa11.58□□□□□ -0.56
TCF3-203ENST00000395423 KRTAP13-4Q3LI77 160 aa11.57□□□□□ -0.56
TCF3-203ENST00000395423 RPL37P61927 97 aaKnown RBP11.57□□□□□ -0.56
TCF3-203ENST00000395423 LRP1Q07954 4544 aaKnown RBP11.57□□□□□ -0.56
TCF3-203ENST00000395423 KRTAP10-4P60372 401 aaPredicted RBP11.56□□□□□ -0.56
TCF3-203ENST00000395423 C10orf95Q9H7T3 257 aa11.56□□□□□ -0.56
TCF3-203ENST00000395423 PKHD1L1Q86WI1 4243 aa11.51□□□□□ -0.57
TCF3-203ENST00000395423 KRTAP10-6P60371 365 aaPredicted RBP11.5□□□□□ -0.57
TCF3-203ENST00000395423 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
TCF3-203ENST00000395423 MYCBP2O75592 4640 aa11.38□□□□□ -0.59
TCF3-203ENST00000395423 RYR3Q15413 4870 aa11.37□□□□□ -0.59
TCF3-203ENST00000395423 KRTAP3-2Q9BYR7 98 aa11.36□□□□□ -0.59
TCF3-203ENST00000395423 NDUFAF8A1L188 74 aa11.35□□□□□ -0.59
TCF3-203ENST00000395423 HSPG2P98160 4391 aa11.31□□□□□ -0.6
TCF3-203ENST00000395423 TNXBP22105 4242 aa11.27□□□□□ -0.61
TCF3-203ENST00000395423 KRTAP15-1Q3LI76 137 aa11.25□□□□□ -0.61
TCF3-203ENST00000395423 S4R3F8 94 aa11.25□□□□□ -0.61
TCF3-203ENST00000395423 KRTAP12-2P59991 146 aa11.24□□□□□ -0.61
TCF3-203ENST00000395423 FAT3Q8TDW7 4589 aa11.24□□□□□ -0.61
TCF3-203ENST00000395423 KRTAP10-8P60410 259 aa11.22□□□□□ -0.61
TCF3-203ENST00000395423 KIAA1109Q2LD37 5005 aa11.22□□□□□ -0.61
TCF3-203ENST00000395423 KRTAP17-1Q9BYP8 105 aa11.22□□□□□ -0.61
TCF3-203ENST00000395423 Q5VSD8 79 aa11.21□□□□□ -0.62
TCF3-203ENST00000395423 RYR1P21817 5038 aa11.13□□□□□ -0.63
TCF3-203ENST00000395423 KRTAP12-1P59990 96 aa11.05□□□□□ -0.64
TCF3-203ENST00000395423 EPPK1P58107 5090 aaKnown RBP10.99□□□□□ -0.65
TCF3-203ENST00000395423 LPAP08519 4548 aa10.96□□□□□ -0.66
TCF3-203ENST00000395423 XP32Q5T750 250 aa10.92□□□□□ -0.66
TCF3-203ENST00000395423 LRP2P98164 4655 aa10.88□□□□□ -0.67
TCF3-203ENST00000395423 MT1HL1P0DM35 61 aa10.84□□□□□ -0.67
TCF3-203ENST00000395423 ABCA13Q86UQ4 5058 aa10.81□□□□□ -0.68
TCF3-203ENST00000395423 M0QZ58 72 aa10.71□□□□□ -0.69
TCF3-203ENST00000395423 KRTAP4-5Q9BYR2 181 aa10.7□□□□□ -0.7
TCF3-203ENST00000395423 PLAC4Q8WY50 150 aa10.53□□□□□ -0.72
TCF3-203ENST00000395423 R4GN34 69 aa10.49□□□□□ -0.73
TCF3-203ENST00000395423 LORP23490 312 aaPredicted RBP10.36□□□□□ -0.75
TCF3-203ENST00000395423 A0A0A0MQY5 61 aa10.36□□□□□ -0.75
TCF3-203ENST00000395423 HERC2O95714 4834 aa10.34□□□□□ -0.75
TCF3-203ENST00000395423 LUZP6Q538Z0 58 aa10.33□□□□□ -0.76
TCF3-203ENST00000395423 MUC2Q02817 5179 aa10.28□□□□□ -0.76
TCF3-203ENST00000395423 J3QL48 77 aa10.2□□□□□ -0.78
TCF3-203ENST00000395423 KRTAP4-1Q9BYQ7 146 aa10.17□□□□□ -0.78
TCF3-203ENST00000395423 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
TCF3-203ENST00000395423 CAMK2N1Q7Z7J9 78 aa10.08□□□□□ -0.8
TCF3-203ENST00000395423 SEC61BP60468 96 aaKnown RBP10.05□□□□□ -0.8
TCF3-203ENST00000395423 HERC1Q15751 4861 aa10.01□□□□□ -0.81
TCF3-203ENST00000395423 PP632Q6XCG6 107 aa9.98□□□□□ -0.81
TCF3-203ENST00000395423 PCLOQ9Y6V0 5065 aa9.91□□□□□ -0.82
TCF3-203ENST00000395423 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.82
TCF3-203ENST00000395423 KRTAP19-2Q3LHN2 52 aa9.8□□□□□ -0.84
TCF3-203ENST00000395423 FAT4Q6V0I7 4981 aa9.75□□□□□ -0.85
TCF3-203ENST00000395423 TNP1P09430 55 aa9.66□□□□□ -0.86
TCF3-203ENST00000395423 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
TCF3-203ENST00000395423 FLGP20930 4061 aaPredicted RBP9.65□□□□□ -0.87
TCF3-203ENST00000395423 RNF213Q63HN8 5207 aa9.62□□□□□ -0.87
TCF3-203ENST00000395423 SPRR5A0A1B0GTR4 108 aa9.55□□□□□ -0.88
TCF3-203ENST00000395423 UBR4Q5T4S7 5183 aa9.49□□□□□ -0.89
TCF3-203ENST00000395423 KRTAP23-1A1A580 65 aa9.38□□□□□ -0.91
TCF3-203ENST00000395423 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
TCF3-203ENST00000395423 M0R2T5 61 aa9.24□□□□□ -0.93
TCF3-203ENST00000395423 LCE3AQ5TA76 89 aa9.18□□□□□ -0.94
TCF3-203ENST00000395423 MT1HP80294 61 aa9.09□□□□□ -0.95
TCF3-203ENST00000395423 PRO2289Q9P1D8 64 aa9.06□□□□□ -0.96
TCF3-203ENST00000395423 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.96
TCF3-203ENST00000395423 SPRR2GQ9BYE4 73 aa8.97□□□□□ -0.97
TCF3-203ENST00000395423 KRTAP10-10P60014 251 aa8.96□□□□□ -0.97
TCF3-203ENST00000395423 MT1FP04733 61 aa8.95□□□□□ -0.98
TCF3-203ENST00000395423 MT2AP02795 61 aa8.91□□□□□ -0.98
TCF3-203ENST00000395423 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
TCF3-203ENST00000395423 INE1O15225 51 aa8.83□□□□□ -1
TCF3-203ENST00000395423 KRTAP8-1Q8IUC2 63 aa8.77□□□□□ -1.01
TCF3-203ENST00000395423 KRTAP12-3P60328 96 aa8.65□□□□□ -1.02
TCF3-203ENST00000395423 MT1BP07438 61 aa8.57□□□□□ -1.04
TCF3-203ENST00000395423 KRTAP10-5P60370 271 aa8.56□□□□□ -1.04
TCF3-203ENST00000395423 USH2AO75445 5202 aa8.56□□□□□ -1.04
TCF3-203ENST00000395423 KRTAP10-12P60413 245 aa8.55□□□□□ -1.04
TCF3-203ENST00000395423 MT1XP80297 61 aa8.53□□□□□ -1.04
TCF3-203ENST00000395423 KRTAP19-8Q3LI54 63 aa8.52□□□□□ -1.05
TCF3-203ENST00000395423 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.05
TCF3-203ENST00000395423 KRTAP10-7P60409 375 aaPredicted RBP8.44□□□□□ -1.06
TCF3-203ENST00000395423 KMT2DO14686 5537 aa8.32□□□□□ -1.08
TCF3-203ENST00000395423 LCE2BO14633 110 aa8.25□□□□□ -1.09
TCF3-203ENST00000395423 KRTAP19-5Q3LI72 72 aa8.16□□□□□ -1.1
TCF3-203ENST00000395423 LCE3CQ5T5A8 94 aa8.15□□□□□ -1.1
TCF3-203ENST00000395423 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
TCF3-203ENST00000395423 FSIP2Q5CZC0 6907 aa8.04□□□□□ -1.12
TCF3-203ENST00000395423 KRTAP9-6A8MVA2 160 aa8.02□□□□□ -1.13
TCF3-203ENST00000395423 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
TCF3-203ENST00000395423 KRTAP4-8Q9BYQ9 185 aa7.95□□□□□ -1.14
TCF3-203ENST00000395423 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
TCF3-203ENST00000395423 KRTAP2-3P0C7H8 128 aa7.77□□□□□ -1.17
TCF3-203ENST00000395423 KRTAP2-4Q9BYR9 128 aa7.77□□□□□ -1.17
TCF3-203ENST00000395423 KRTAP2-1Q9BYU5 128 aa7.77□□□□□ -1.17
TCF3-203ENST00000395423 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
TCF3-203ENST00000395423 KRTAP19-7Q3SYF9 63 aa7.59□□□□□ -1.19
TCF3-203ENST00000395423 MT1LQ93083 61 aa7.41□□□□□ -1.22
TCF3-203ENST00000395423 FCGBPQ9Y6R7 5405 aaPredicted RBP7.38□□□□□ -1.23
TCF3-203ENST00000395423 MUC12Q9UKN1 5478 aa7.36□□□□□ -1.23
TCF3-203ENST00000395423 MT1EP04732 61 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms