RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
PPP3CB-204ENST00000394829 LRP1Q07954 4544 aaKnown RBP6.64□□□□□ -1.35
PPP3CB-204ENST00000394829 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
PPP3CB-204ENST00000394829 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
PPP3CB-204ENST00000394829 TNXBP22105 4242 aa6.59□□□□□ -1.35
PPP3CB-204ENST00000394829 A0A1B0GU33 70 aa6.59□□□□□ -1.36
PPP3CB-204ENST00000394829 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
PPP3CB-204ENST00000394829 Q5VSD8 79 aa6.56□□□□□ -1.36
PPP3CB-204ENST00000394829 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
PPP3CB-204ENST00000394829 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
PPP3CB-204ENST00000394829 MYCBP2O75592 4640 aa6.52□□□□□ -1.36
PPP3CB-204ENST00000394829 NDUFAF8A1L188 74 aa6.46□□□□□ -1.37
PPP3CB-204ENST00000394829 KRTAP10-8P60410 259 aa6.45□□□□□ -1.38
PPP3CB-204ENST00000394829 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
PPP3CB-204ENST00000394829 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
PPP3CB-204ENST00000394829 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
PPP3CB-204ENST00000394829 C10orf95Q9H7T3 257 aa6.4□□□□□ -1.38
PPP3CB-204ENST00000394829 XP32Q5T750 250 aa6.4□□□□□ -1.39
PPP3CB-204ENST00000394829 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
PPP3CB-204ENST00000394829 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
PPP3CB-204ENST00000394829 LPAP08519 4548 aa6.37□□□□□ -1.39
PPP3CB-204ENST00000394829 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
PPP3CB-204ENST00000394829 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
PPP3CB-204ENST00000394829 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
PPP3CB-204ENST00000394829 K7ERS5 55 aa6.34□□□□□ -1.39
PPP3CB-204ENST00000394829 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.4
PPP3CB-204ENST00000394829 S4R3F8 94 aa6.33□□□□□ -1.4
PPP3CB-204ENST00000394829 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
PPP3CB-204ENST00000394829 A0A0D9SG42 100 aa6.31□□□□□ -1.4
PPP3CB-204ENST00000394829 ABCA13Q86UQ4 5058 aa6.29□□□□□ -1.4
PPP3CB-204ENST00000394829 BIRC6Q9NR09 4857 aa6.29□□□□□ -1.4
PPP3CB-204ENST00000394829 LRP2P98164 4655 aa6.28□□□□□ -1.4
PPP3CB-204ENST00000394829 HERC2O95714 4834 aa6.26□□□□□ -1.41
PPP3CB-204ENST00000394829 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
PPP3CB-204ENST00000394829 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
PPP3CB-204ENST00000394829 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
PPP3CB-204ENST00000394829 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
PPP3CB-204ENST00000394829 J3QL48 77 aa6.05□□□□□ -1.44
PPP3CB-204ENST00000394829 M0QZ58 72 aa6□□□□□ -1.45
PPP3CB-204ENST00000394829 MUC17Q685J3 4493 aa6□□□□□ -1.45
PPP3CB-204ENST00000394829 LUZP6Q538Z0 58 aa5.96□□□□□ -1.45
PPP3CB-204ENST00000394829 HERC1Q15751 4861 aa5.93□□□□□ -1.46
PPP3CB-204ENST00000394829 R4GN34 69 aa5.89□□□□□ -1.47
PPP3CB-204ENST00000394829 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
PPP3CB-204ENST00000394829 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
PPP3CB-204ENST00000394829 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
PPP3CB-204ENST00000394829 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
PPP3CB-204ENST00000394829 MUC2Q02817 5179 aa5.79□□□□□ -1.48
PPP3CB-204ENST00000394829 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
PPP3CB-204ENST00000394829 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
PPP3CB-204ENST00000394829 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
PPP3CB-204ENST00000394829 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
PPP3CB-204ENST00000394829 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
PPP3CB-204ENST00000394829 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
PPP3CB-204ENST00000394829 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
PPP3CB-204ENST00000394829 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
PPP3CB-204ENST00000394829 PP632Q6XCG6 107 aa5.46□□□□□ -1.53
PPP3CB-204ENST00000394829 TNP1P09430 55 aa5.37□□□□□ -1.55
PPP3CB-204ENST00000394829 MT1HP80294 61 aa5.35□□□□□ -1.55
PPP3CB-204ENST00000394829 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
PPP3CB-204ENST00000394829 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
PPP3CB-204ENST00000394829 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
PPP3CB-204ENST00000394829 M0R2T5 61 aa5.26□□□□□ -1.57
PPP3CB-204ENST00000394829 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
PPP3CB-204ENST00000394829 MT1FP04733 61 aa5.17□□□□□ -1.58
PPP3CB-204ENST00000394829 MT2AP02795 61 aa5.16□□□□□ -1.58
PPP3CB-204ENST00000394829 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
PPP3CB-204ENST00000394829 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
PPP3CB-204ENST00000394829 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
PPP3CB-204ENST00000394829 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
PPP3CB-204ENST00000394829 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
PPP3CB-204ENST00000394829 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
PPP3CB-204ENST00000394829 MT1BP07438 61 aa5.01□□□□□ -1.61
PPP3CB-204ENST00000394829 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
PPP3CB-204ENST00000394829 MT1XP80297 61 aa4.98□□□□□ -1.61
PPP3CB-204ENST00000394829 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
PPP3CB-204ENST00000394829 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
PPP3CB-204ENST00000394829 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
PPP3CB-204ENST00000394829 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
PPP3CB-204ENST00000394829 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
PPP3CB-204ENST00000394829 LCE2BO14633 110 aa4.85□□□□□ -1.63
PPP3CB-204ENST00000394829 INE1O15225 51 aa4.81□□□□□ -1.64
PPP3CB-204ENST00000394829 USH2AO75445 5202 aa4.78□□□□□ -1.64
PPP3CB-204ENST00000394829 KMT2DO14686 5537 aa4.74□□□□□ -1.65
PPP3CB-204ENST00000394829 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
PPP3CB-204ENST00000394829 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
PPP3CB-204ENST00000394829 SSPOA2VEC9 5147 aa4.59□□□□□ -1.67
PPP3CB-204ENST00000394829 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.68
PPP3CB-204ENST00000394829 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.68
PPP3CB-204ENST00000394829 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
PPP3CB-204ENST00000394829 LCE2DQ5TA82 110 aaPredicted RBP4.54□□□□□ -1.68
PPP3CB-204ENST00000394829 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
PPP3CB-204ENST00000394829 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
PPP3CB-204ENST00000394829 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
PPP3CB-204ENST00000394829 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
PPP3CB-204ENST00000394829 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
PPP3CB-204ENST00000394829 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
PPP3CB-204ENST00000394829 MT1LQ93083 61 aa4.3□□□□□ -1.72
PPP3CB-204ENST00000394829 MT1EP04732 61 aa4.3□□□□□ -1.72
PPP3CB-204ENST00000394829 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms