RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
CIT-203ENST00000392521 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
CIT-203ENST00000392521 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
CIT-203ENST00000392521 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
CIT-203ENST00000392521 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
CIT-203ENST00000392521 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
CIT-203ENST00000392521 LYSTQ99698 3801 aa4.93□□□□□ -1.62
CIT-203ENST00000392521 DNAH2Q9P225 4427 aa4.9□□□□□ -1.63
CIT-203ENST00000392521 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
CIT-203ENST00000392521 DNAH1Q9P2D7 4330 aa4.88□□□□□ -1.63
CIT-203ENST00000392521 DNAH3Q8TD57 4116 aa4.83□□□□□ -1.64
CIT-203ENST00000392521 DNAH7Q8WXX0 4024 aa4.82□□□□□ -1.64
CIT-203ENST00000392521 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
CIT-203ENST00000392521 KMT2AQ03164 3969 aa4.79□□□□□ -1.64
CIT-203ENST00000392521 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
CIT-203ENST00000392521 ANK2Q01484 3957 aa4.77□□□□□ -1.65
CIT-203ENST00000392521 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
CIT-203ENST00000392521 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
CIT-203ENST00000392521 MT1HP80294 61 aa4.59□□□□□ -1.67
CIT-203ENST00000392521 DNAH6Q9C0G6 4158 aa4.59□□□□□ -1.67
CIT-203ENST00000392521 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
CIT-203ENST00000392521 HECTD4Q9Y4D8 3996 aa4.57□□□□□ -1.68
CIT-203ENST00000392521 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
CIT-203ENST00000392521 DNAH9Q9NYC9 4486 aa4.53□□□□□ -1.68
CIT-203ENST00000392521 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
CIT-203ENST00000392521 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
CIT-203ENST00000392521 SPRR2EP22531 72 aa4.49□□□□□ -1.69
CIT-203ENST00000392521 SPRR2BP35325 72 aa4.49□□□□□ -1.69
CIT-203ENST00000392521 SPRR2AP35326 72 aa4.49□□□□□ -1.69
CIT-203ENST00000392521 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
CIT-203ENST00000392521 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
CIT-203ENST00000392521 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.7
CIT-203ENST00000392521 MT2AP02795 61 aa4.45□□□□□ -1.7
CIT-203ENST00000392521 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
CIT-203ENST00000392521 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
CIT-203ENST00000392521 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
CIT-203ENST00000392521 MT1FP04733 61 aa4.36□□□□□ -1.71
CIT-203ENST00000392521 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
CIT-203ENST00000392521 SPRR2DP22532 72 aa4.34□□□□□ -1.71
CIT-203ENST00000392521 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
CIT-203ENST00000392521 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
CIT-203ENST00000392521 LCE2BO14633 110 aa4.32□□□□□ -1.72
CIT-203ENST00000392521 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
CIT-203ENST00000392521 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
CIT-203ENST00000392521 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
CIT-203ENST00000392521 MT1GP13640 62 aa4.22□□□□□ -1.73
CIT-203ENST00000392521 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
CIT-203ENST00000392521 PLECQ15149 4684 aaKnown RBP4.12□□□□□ -1.75
CIT-203ENST00000392521 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CIT-203ENST00000392521 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
CIT-203ENST00000392521 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
CIT-203ENST00000392521 PKD1P98161 4303 aa4.07□□□□□ -1.76
CIT-203ENST00000392521 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
CIT-203ENST00000392521 LRP1BQ9NZR2 4599 aa4.05□□□□□ -1.76
CIT-203ENST00000392521 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
CIT-203ENST00000392521 MT1XP80297 61 aa4.01□□□□□ -1.77
CIT-203ENST00000392521 LCE2DQ5TA82 110 aaPredicted RBP4□□□□□ -1.77
CIT-203ENST00000392521 KRTAP19-8Q3LI54 63 aa4□□□□□ -1.77
CIT-203ENST00000392521 FAT1Q14517 4588 aa4□□□□□ -1.77
CIT-203ENST00000392521 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
CIT-203ENST00000392521 KRTAP19-1Q8IUB9 90 aa3.96□□□□□ -1.77
CIT-203ENST00000392521 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
CIT-203ENST00000392521 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
CIT-203ENST00000392521 APOBP04114 4563 aaKnown RBP3.93□□□□□ -1.78
CIT-203ENST00000392521 MT4P47944 62 aa3.91□□□□□ -1.78
CIT-203ENST00000392521 TNXBP22105 4242 aa3.87□□□□□ -1.79
CIT-203ENST00000392521 SACSQ9NZJ4 4579 aa3.87□□□□□ -1.79
CIT-203ENST00000392521 MT3P25713 68 aa3.86□□□□□ -1.79
CIT-203ENST00000392521 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
CIT-203ENST00000392521 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
CIT-203ENST00000392521 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
CIT-203ENST00000392521 MT1BP07438 61 aa3.82□□□□□ -1.8
CIT-203ENST00000392521 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
CIT-203ENST00000392521 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
CIT-203ENST00000392521 DYNC1H1Q14204 4646 aaKnown RBP3.82□□□□□ -1.8
CIT-203ENST00000392521 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
CIT-203ENST00000392521 PRM1P04553 51 aa3.78□□□□□ -1.8
CIT-203ENST00000392521 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
CIT-203ENST00000392521 MT1LQ93083 61 aa3.76□□□□□ -1.81
CIT-203ENST00000392521 LPAP08519 4548 aa3.76□□□□□ -1.81
CIT-203ENST00000392521 HSPG2P98160 4391 aa3.75□□□□□ -1.81
CIT-203ENST00000392521 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
CIT-203ENST00000392521 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
CIT-203ENST00000392521 MYCBP2O75592 4640 aa3.65□□□□□ -1.83
CIT-203ENST00000392521 MT1EP04732 61 aa3.64□□□□□ -1.83
CIT-203ENST00000392521 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
CIT-203ENST00000392521 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
CIT-203ENST00000392521 MT1MQ8N339 61 aa3.57□□□□□ -1.84
CIT-203ENST00000392521 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
CIT-203ENST00000392521 KRTAP17-1Q9BYP8 105 aa3.54□□□□□ -1.84
CIT-203ENST00000392521 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
CIT-203ENST00000392521 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
CIT-203ENST00000392521 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
CIT-203ENST00000392521 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
CIT-203ENST00000392521 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CIT-203ENST00000392521 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
CIT-203ENST00000392521 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
CIT-203ENST00000392521 DNHD1Q96M86 4753 aa3.41□□□□□ -1.86
CIT-203ENST00000392521 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.87
CIT-203ENST00000392521 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms