RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 HSPG2P98160 4391 aa7.59□□□□□ -1.19
LRRFIP1-204ENST00000392000 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
LRRFIP1-204ENST00000392000 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
LRRFIP1-204ENST00000392000 KRTAP13-4Q3LI77 160 aa7.57□□□□□ -1.2
LRRFIP1-204ENST00000392000 KRTAP10-4P60372 401 aaPredicted RBP7.54□□□□□ -1.2
LRRFIP1-204ENST00000392000 P0C880 135 aa7.53□□□□□ -1.2
LRRFIP1-204ENST00000392000 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
LRRFIP1-204ENST00000392000 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
LRRFIP1-204ENST00000392000 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
LRRFIP1-204ENST00000392000 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
LRRFIP1-204ENST00000392000 S4R3F8 94 aa7.48□□□□□ -1.21
LRRFIP1-204ENST00000392000 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
LRRFIP1-204ENST00000392000 KRTAP10-6P60371 365 aaPredicted RBP7.45□□□□□ -1.22
LRRFIP1-204ENST00000392000 Q5VSD8 79 aa7.43□□□□□ -1.22
LRRFIP1-204ENST00000392000 RYR2Q92736 4967 aa7.43□□□□□ -1.22
LRRFIP1-204ENST00000392000 KIAA1109Q2LD37 5005 aa7.43□□□□□ -1.22
LRRFIP1-204ENST00000392000 LPAP08519 4548 aa7.41□□□□□ -1.22
LRRFIP1-204ENST00000392000 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.23
LRRFIP1-204ENST00000392000 NDUFAF8A1L188 74 aa7.38□□□□□ -1.23
LRRFIP1-204ENST00000392000 LRP2P98164 4655 aa7.36□□□□□ -1.23
LRRFIP1-204ENST00000392000 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
LRRFIP1-204ENST00000392000 XP32Q5T750 250 aa7.36□□□□□ -1.23
LRRFIP1-204ENST00000392000 RYR3Q15413 4870 aa7.33□□□□□ -1.24
LRRFIP1-204ENST00000392000 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
LRRFIP1-204ENST00000392000 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
LRRFIP1-204ENST00000392000 TNXBP22105 4242 aa7.31□□□□□ -1.24
LRRFIP1-204ENST00000392000 RYR1P21817 5038 aa7.3□□□□□ -1.24
LRRFIP1-204ENST00000392000 M0QZ58 72 aa7.2□□□□□ -1.26
LRRFIP1-204ENST00000392000 KRTAP12-1P59990 96 aa7.18□□□□□ -1.26
LRRFIP1-204ENST00000392000 ABCA13Q86UQ4 5058 aa7.14□□□□□ -1.27
LRRFIP1-204ENST00000392000 R4GN34 69 aa7.14□□□□□ -1.27
LRRFIP1-204ENST00000392000 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
LRRFIP1-204ENST00000392000 EPPK1P58107 5090 aaKnown RBP7.09□□□□□ -1.27
LRRFIP1-204ENST00000392000 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
LRRFIP1-204ENST00000392000 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
LRRFIP1-204ENST00000392000 MUC2Q02817 5179 aa6.99□□□□□ -1.29
LRRFIP1-204ENST00000392000 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
LRRFIP1-204ENST00000392000 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
LRRFIP1-204ENST00000392000 PLAC4Q8WY50 150 aa6.84□□□□□ -1.31
LRRFIP1-204ENST00000392000 J3QL48 77 aa6.81□□□□□ -1.32
LRRFIP1-204ENST00000392000 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
LRRFIP1-204ENST00000392000 HERC2O95714 4834 aa6.74□□□□□ -1.33
LRRFIP1-204ENST00000392000 LUZP6Q538Z0 58 aa6.73□□□□□ -1.33
LRRFIP1-204ENST00000392000 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.34
LRRFIP1-204ENST00000392000 MUC17Q685J3 4493 aa6.65□□□□□ -1.34
LRRFIP1-204ENST00000392000 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
LRRFIP1-204ENST00000392000 HERC1Q15751 4861 aa6.6□□□□□ -1.35
LRRFIP1-204ENST00000392000 RNF213Q63HN8 5207 aa6.5□□□□□ -1.37
LRRFIP1-204ENST00000392000 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
LRRFIP1-204ENST00000392000 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.38
LRRFIP1-204ENST00000392000 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
LRRFIP1-204ENST00000392000 TNP1P09430 55 aa6.44□□□□□ -1.38
LRRFIP1-204ENST00000392000 M0R2T5 61 aa6.43□□□□□ -1.38
LRRFIP1-204ENST00000392000 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
LRRFIP1-204ENST00000392000 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
LRRFIP1-204ENST00000392000 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
LRRFIP1-204ENST00000392000 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.41
LRRFIP1-204ENST00000392000 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
LRRFIP1-204ENST00000392000 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
LRRFIP1-204ENST00000392000 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
LRRFIP1-204ENST00000392000 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
LRRFIP1-204ENST00000392000 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
LRRFIP1-204ENST00000392000 MT1FP04733 61 aa5.96□□□□□ -1.46
LRRFIP1-204ENST00000392000 MT1HP80294 61 aa5.95□□□□□ -1.46
LRRFIP1-204ENST00000392000 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
LRRFIP1-204ENST00000392000 MT2AP02795 61 aa5.9□□□□□ -1.46
LRRFIP1-204ENST00000392000 USH2AO75445 5202 aa5.88□□□□□ -1.47
LRRFIP1-204ENST00000392000 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
LRRFIP1-204ENST00000392000 KMT2DO14686 5537 aa5.81□□□□□ -1.48
LRRFIP1-204ENST00000392000 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
LRRFIP1-204ENST00000392000 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
LRRFIP1-204ENST00000392000 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
LRRFIP1-204ENST00000392000 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
LRRFIP1-204ENST00000392000 MT1BP07438 61 aa5.69□□□□□ -1.5
LRRFIP1-204ENST00000392000 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
LRRFIP1-204ENST00000392000 MT1XP80297 61 aa5.69□□□□□ -1.5
LRRFIP1-204ENST00000392000 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
LRRFIP1-204ENST00000392000 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
LRRFIP1-204ENST00000392000 FSIP2Q5CZC0 6907 aa5.61□□□□□ -1.51
LRRFIP1-204ENST00000392000 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
LRRFIP1-204ENST00000392000 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
LRRFIP1-204ENST00000392000 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
LRRFIP1-204ENST00000392000 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
LRRFIP1-204ENST00000392000 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.53
LRRFIP1-204ENST00000392000 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.53
LRRFIP1-204ENST00000392000 INE1O15225 51 aa5.44□□□□□ -1.54
LRRFIP1-204ENST00000392000 LCE2BO14633 110 aa5.41□□□□□ -1.54
LRRFIP1-204ENST00000392000 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
LRRFIP1-204ENST00000392000 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
LRRFIP1-204ENST00000392000 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
LRRFIP1-204ENST00000392000 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
LRRFIP1-204ENST00000392000 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
LRRFIP1-204ENST00000392000 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
LRRFIP1-204ENST00000392000 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
LRRFIP1-204ENST00000392000 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
LRRFIP1-204ENST00000392000 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
LRRFIP1-204ENST00000392000 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
LRRFIP1-204ENST00000392000 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
LRRFIP1-204ENST00000392000 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
LRRFIP1-204ENST00000392000 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms