RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
TRAF3IP1-202ENST00000391993 LRP1BQ9NZR2 4599 aa8.4□□□□□ -1.07
TRAF3IP1-202ENST00000391993 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
TRAF3IP1-202ENST00000391993 MYCBP2O75592 4640 aa8.29□□□□□ -1.08
TRAF3IP1-202ENST00000391993 DNAH2Q9P225 4427 aa8.29□□□□□ -1.08
TRAF3IP1-202ENST00000391993 DNHD1Q96M86 4753 aa8.27□□□□□ -1.08
TRAF3IP1-202ENST00000391993 FAT1Q14517 4588 aa8.25□□□□□ -1.09
TRAF3IP1-202ENST00000391993 DNAH6Q9C0G6 4158 aa8.21□□□□□ -1.09
TRAF3IP1-202ENST00000391993 HECTD4Q9Y4D8 3996 aa8.21□□□□□ -1.1
TRAF3IP1-202ENST00000391993 J3QL48 77 aa8.16□□□□□ -1.1
TRAF3IP1-202ENST00000391993 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
TRAF3IP1-202ENST00000391993 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
TRAF3IP1-202ENST00000391993 TNP1P09430 55 aa8.08□□□□□ -1.12
TRAF3IP1-202ENST00000391993 DYNC2H1Q8NCM8 4307 aaKnown RBP8.06□□□□□ -1.12
TRAF3IP1-202ENST00000391993 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
TRAF3IP1-202ENST00000391993 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
TRAF3IP1-202ENST00000391993 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
TRAF3IP1-202ENST00000391993 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
TRAF3IP1-202ENST00000391993 M0R2T5 61 aa7.96□□□□□ -1.13
TRAF3IP1-202ENST00000391993 HYDINQ4G0P3 5121 aa7.96□□□□□ -1.13
TRAF3IP1-202ENST00000391993 DYNC1H1Q14204 4646 aaKnown RBP7.92□□□□□ -1.14
TRAF3IP1-202ENST00000391993 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
TRAF3IP1-202ENST00000391993 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
TRAF3IP1-202ENST00000391993 PKHD1P08F94 4074 aa7.85□□□□□ -1.15
TRAF3IP1-202ENST00000391993 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
TRAF3IP1-202ENST00000391993 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
TRAF3IP1-202ENST00000391993 KRTAP21-3Q3LHN1 58 aa7.75□□□□□ -1.17
TRAF3IP1-202ENST00000391993 FAT2Q9NYQ8 4349 aa7.71□□□□□ -1.18
TRAF3IP1-202ENST00000391993 SACSQ9NZJ4 4579 aa7.69□□□□□ -1.18
TRAF3IP1-202ENST00000391993 PKD1P98161 4303 aa7.66□□□□□ -1.18
TRAF3IP1-202ENST00000391993 LRP2P98164 4655 aa7.57□□□□□ -1.2
TRAF3IP1-202ENST00000391993 HSPG2P98160 4391 aa7.52□□□□□ -1.21
TRAF3IP1-202ENST00000391993 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
TRAF3IP1-202ENST00000391993 KIAA1109Q2LD37 5005 aa7.5□□□□□ -1.21
TRAF3IP1-202ENST00000391993 RYR1P21817 5038 aa7.46□□□□□ -1.21
TRAF3IP1-202ENST00000391993 KMT2CQ8NEZ4 4911 aaKnown RBP7.45□□□□□ -1.22
TRAF3IP1-202ENST00000391993 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
TRAF3IP1-202ENST00000391993 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
TRAF3IP1-202ENST00000391993 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
TRAF3IP1-202ENST00000391993 RYR3Q15413 4870 aa7.36□□□□□ -1.23
TRAF3IP1-202ENST00000391993 RYR2Q92736 4967 aa7.34□□□□□ -1.23
TRAF3IP1-202ENST00000391993 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
TRAF3IP1-202ENST00000391993 LPAP08519 4548 aa7.24□□□□□ -1.25
TRAF3IP1-202ENST00000391993 PKHD1L1Q86WI1 4243 aa7.23□□□□□ -1.25
TRAF3IP1-202ENST00000391993 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
TRAF3IP1-202ENST00000391993 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
TRAF3IP1-202ENST00000391993 INE1O15225 51 aa7.15□□□□□ -1.26
TRAF3IP1-202ENST00000391993 TNXBP22105 4242 aa7.09□□□□□ -1.27
TRAF3IP1-202ENST00000391993 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
TRAF3IP1-202ENST00000391993 EPPK1P58107 5090 aaKnown RBP6.94□□□□□ -1.3
TRAF3IP1-202ENST00000391993 KRTAP23-1A1A580 65 aa6.91□□□□□ -1.3
TRAF3IP1-202ENST00000391993 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
TRAF3IP1-202ENST00000391993 MUC2Q02817 5179 aa6.88□□□□□ -1.31
TRAF3IP1-202ENST00000391993 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
TRAF3IP1-202ENST00000391993 HERC2O95714 4834 aa6.83□□□□□ -1.32
TRAF3IP1-202ENST00000391993 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
TRAF3IP1-202ENST00000391993 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
TRAF3IP1-202ENST00000391993 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
TRAF3IP1-202ENST00000391993 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
TRAF3IP1-202ENST00000391993 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
TRAF3IP1-202ENST00000391993 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
TRAF3IP1-202ENST00000391993 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
TRAF3IP1-202ENST00000391993 HERC1Q15751 4861 aa6.47□□□□□ -1.37
TRAF3IP1-202ENST00000391993 MT1FP04733 61 aa6.47□□□□□ -1.37
TRAF3IP1-202ENST00000391993 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
TRAF3IP1-202ENST00000391993 MT2AP02795 61 aa6.42□□□□□ -1.38
TRAF3IP1-202ENST00000391993 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
TRAF3IP1-202ENST00000391993 RNF213Q63HN8 5207 aa6.38□□□□□ -1.39
TRAF3IP1-202ENST00000391993 UBR4Q5T4S7 5183 aa6.37□□□□□ -1.39
TRAF3IP1-202ENST00000391993 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
TRAF3IP1-202ENST00000391993 HMCN2Q8NDA2 5059 aa6.34□□□□□ -1.39
TRAF3IP1-202ENST00000391993 OBSCNQ5VST9 7968 aa6.33□□□□□ -1.4
TRAF3IP1-202ENST00000391993 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
TRAF3IP1-202ENST00000391993 MT1HP80294 61 aa6.33□□□□□ -1.4
TRAF3IP1-202ENST00000391993 BIRC6Q9NR09 4857 aa6.3□□□□□ -1.4
TRAF3IP1-202ENST00000391993 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
TRAF3IP1-202ENST00000391993 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
TRAF3IP1-202ENST00000391993 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
TRAF3IP1-202ENST00000391993 MT1XP80297 61 aa6.25□□□□□ -1.41
TRAF3IP1-202ENST00000391993 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
TRAF3IP1-202ENST00000391993 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
TRAF3IP1-202ENST00000391993 MT1BP07438 61 aa6.14□□□□□ -1.43
TRAF3IP1-202ENST00000391993 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
TRAF3IP1-202ENST00000391993 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
TRAF3IP1-202ENST00000391993 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
TRAF3IP1-202ENST00000391993 KMT2DO14686 5537 aa6.08□□□□□ -1.44
TRAF3IP1-202ENST00000391993 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
TRAF3IP1-202ENST00000391993 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
TRAF3IP1-202ENST00000391993 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
TRAF3IP1-202ENST00000391993 USH2AO75445 5202 aa5.94□□□□□ -1.46
TRAF3IP1-202ENST00000391993 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
TRAF3IP1-202ENST00000391993 DSTQ03001 7570 aaKnown RBP5.9□□□□□ -1.47
TRAF3IP1-202ENST00000391993 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
TRAF3IP1-202ENST00000391993 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
TRAF3IP1-202ENST00000391993 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
TRAF3IP1-202ENST00000391993 MT1GP13640 62 aa5.73□□□□□ -1.49
TRAF3IP1-202ENST00000391993 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
TRAF3IP1-202ENST00000391993 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
TRAF3IP1-202ENST00000391993 LCE2BO14633 110 aa5.64□□□□□ -1.51
TRAF3IP1-202ENST00000391993 KRTAP4-3Q9BYR4 195 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms