RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 KMT2CQ8NEZ4 4911 aaKnown RBP9.41□□□□□ -0.9
ERCC2-201ENST00000391941 ROMO1P60602 79 aa9.4□□□□□ -0.91
ERCC2-201ENST00000391941 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
ERCC2-201ENST00000391941 KRTAP13-4Q3LI77 160 aa9.38□□□□□ -0.91
ERCC2-201ENST00000391941 LPAP08519 4548 aa9.37□□□□□ -0.91
ERCC2-201ENST00000391941 KRTAP10-8P60410 259 aa9.33□□□□□ -0.92
ERCC2-201ENST00000391941 K7ERS5 55 aa9.3□□□□□ -0.92
ERCC2-201ENST00000391941 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
ERCC2-201ENST00000391941 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
ERCC2-201ENST00000391941 TNXBP22105 4242 aa9.27□□□□□ -0.93
ERCC2-201ENST00000391941 A0A1B0GVY2 172 aa9.27□□□□□ -0.93
ERCC2-201ENST00000391941 C10orf95Q9H7T3 257 aa9.26□□□□□ -0.93
ERCC2-201ENST00000391941 RYR2Q92736 4967 aa9.23□□□□□ -0.93
ERCC2-201ENST00000391941 P0C880 135 aa9.22□□□□□ -0.93
ERCC2-201ENST00000391941 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
ERCC2-201ENST00000391941 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
ERCC2-201ENST00000391941 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
ERCC2-201ENST00000391941 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
ERCC2-201ENST00000391941 LRP2P98164 4655 aa9.13□□□□□ -0.95
ERCC2-201ENST00000391941 S4R3F8 94 aa9.1□□□□□ -0.95
ERCC2-201ENST00000391941 J3QL48 77 aa9.1□□□□□ -0.95
ERCC2-201ENST00000391941 XP32Q5T750 250 aa9.07□□□□□ -0.96
ERCC2-201ENST00000391941 KRTAP12-2P59991 146 aa9.06□□□□□ -0.96
ERCC2-201ENST00000391941 KRTAP17-1Q9BYP8 105 aa9.05□□□□□ -0.96
ERCC2-201ENST00000391941 SPINT4Q6UDR6 99 aa9.04□□□□□ -0.96
ERCC2-201ENST00000391941 KIAA1109Q2LD37 5005 aa9.03□□□□□ -0.96
ERCC2-201ENST00000391941 RYR1P21817 5038 aa9□□□□□ -0.97
ERCC2-201ENST00000391941 RYR3Q15413 4870 aa9□□□□□ -0.97
ERCC2-201ENST00000391941 SEC61BP60468 96 aaKnown RBP9□□□□□ -0.97
ERCC2-201ENST00000391941 Q5VSD8 79 aa8.97□□□□□ -0.97
ERCC2-201ENST00000391941 NDUFAF8A1L188 74 aa8.94□□□□□ -0.98
ERCC2-201ENST00000391941 ABCA13Q86UQ4 5058 aa8.91□□□□□ -0.98
ERCC2-201ENST00000391941 LUZP6Q538Z0 58 aa8.91□□□□□ -0.98
ERCC2-201ENST00000391941 KRTAP12-1P59990 96 aa8.87□□□□□ -0.99
ERCC2-201ENST00000391941 MT1HL1P0DM35 61 aa8.73□□□□□ -1.01
ERCC2-201ENST00000391941 KRTAP15-1Q3LI76 137 aa8.71□□□□□ -1.02
ERCC2-201ENST00000391941 EPPK1P58107 5090 aaKnown RBP8.7□□□□□ -1.02
ERCC2-201ENST00000391941 M0QZ58 72 aa8.65□□□□□ -1.02
ERCC2-201ENST00000391941 MUC2Q02817 5179 aa8.61□□□□□ -1.03
ERCC2-201ENST00000391941 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
ERCC2-201ENST00000391941 R4GN34 69 aa8.52□□□□□ -1.04
ERCC2-201ENST00000391941 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
ERCC2-201ENST00000391941 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
ERCC2-201ENST00000391941 KRTAP4-1Q9BYQ7 146 aa8.39□□□□□ -1.07
ERCC2-201ENST00000391941 PLAC4Q8WY50 150 aa8.24□□□□□ -1.09
ERCC2-201ENST00000391941 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
ERCC2-201ENST00000391941 HERC2O95714 4834 aa8.16□□□□□ -1.1
ERCC2-201ENST00000391941 PCLOQ9Y6V0 5065 aa8.16□□□□□ -1.1
ERCC2-201ENST00000391941 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
ERCC2-201ENST00000391941 KRTAP19-2Q3LHN2 52 aa8.08□□□□□ -1.12
ERCC2-201ENST00000391941 HERC1Q15751 4861 aa8.02□□□□□ -1.13
ERCC2-201ENST00000391941 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
ERCC2-201ENST00000391941 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
ERCC2-201ENST00000391941 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
ERCC2-201ENST00000391941 BIRC6Q9NR09 4857 aa7.79□□□□□ -1.16
ERCC2-201ENST00000391941 TNP1P09430 55 aa7.76□□□□□ -1.17
ERCC2-201ENST00000391941 HMCN2Q8NDA2 5059 aa7.67□□□□□ -1.18
ERCC2-201ENST00000391941 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
ERCC2-201ENST00000391941 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
ERCC2-201ENST00000391941 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
ERCC2-201ENST00000391941 M0R2T5 61 aa7.52□□□□□ -1.21
ERCC2-201ENST00000391941 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.21
ERCC2-201ENST00000391941 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
ERCC2-201ENST00000391941 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
ERCC2-201ENST00000391941 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
ERCC2-201ENST00000391941 SPRR2GQ9BYE4 73 aa7.48□□□□□ -1.21
ERCC2-201ENST00000391941 MT1FP04733 61 aa7.34□□□□□ -1.23
ERCC2-201ENST00000391941 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
ERCC2-201ENST00000391941 MT1HP80294 61 aa7.3□□□□□ -1.24
ERCC2-201ENST00000391941 MT2AP02795 61 aa7.26□□□□□ -1.25
ERCC2-201ENST00000391941 USH2AO75445 5202 aa7.18□□□□□ -1.26
ERCC2-201ENST00000391941 KMT2DO14686 5537 aa7.17□□□□□ -1.26
ERCC2-201ENST00000391941 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
ERCC2-201ENST00000391941 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
ERCC2-201ENST00000391941 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
ERCC2-201ENST00000391941 MT1XP80297 61 aa7.1□□□□□ -1.27
ERCC2-201ENST00000391941 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
ERCC2-201ENST00000391941 MT1BP07438 61 aa7.08□□□□□ -1.28
ERCC2-201ENST00000391941 KRTAP10-7P60409 375 aaPredicted RBP7.06□□□□□ -1.28
ERCC2-201ENST00000391941 KRTAP12-3P60328 96 aa7.02□□□□□ -1.29
ERCC2-201ENST00000391941 KRTAP10-12P60413 245 aa7□□□□□ -1.29
ERCC2-201ENST00000391941 INE1O15225 51 aa6.98□□□□□ -1.29
ERCC2-201ENST00000391941 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
ERCC2-201ENST00000391941 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
ERCC2-201ENST00000391941 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
ERCC2-201ENST00000391941 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
ERCC2-201ENST00000391941 LCE2BO14633 110 aa6.64□□□□□ -1.35
ERCC2-201ENST00000391941 FSIP2Q5CZC0 6907 aa6.61□□□□□ -1.35
ERCC2-201ENST00000391941 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
ERCC2-201ENST00000391941 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.35
ERCC2-201ENST00000391941 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.36
ERCC2-201ENST00000391941 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
ERCC2-201ENST00000391941 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
ERCC2-201ENST00000391941 SSPOA2VEC9 5147 aa6.21□□□□□ -1.41
ERCC2-201ENST00000391941 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
ERCC2-201ENST00000391941 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
ERCC2-201ENST00000391941 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
ERCC2-201ENST00000391941 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
ERCC2-201ENST00000391941 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
ERCC2-201ENST00000391941 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms