RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 STAB2Q8WWQ8 2551 aa0.02□□□□□ -2.41
SNORA40.19-201ENST00000390846 TLN2Q9Y4G6 2542 aa0.02□□□□□ -2.41
SNORA40.19-201ENST00000390846 C9orf92A6NGG3 77 aa0.02□□□□□ -2.41
SNORA40.19-201ENST00000390846 MT1AP04731 61 aa0.02□□□□□ -2.41
SNORA40.19-201ENST00000390846 MXRA5Q9NR99 2828 aa0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 FAT1Q14517 4588 aa0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 M0QY20 66 aa0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 DEFB110Q30KQ9 67 aa0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 SPRR2FQ96RM1 72 aa0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 DNAH8Q96JB1 4490 aa0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 VPS13DQ5THJ4 4388 aa0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 ITPR3Q14573 2671 aa0□□□□□ -2.41
SNORA40.19-201ENST00000390846 KRTAP19-5Q3LI72 72 aa0□□□□□ -2.41
SNORA40.19-201ENST00000390846 NOP10Q9NPE3 64 aaKnown RBP0□□□□□ -2.41
SNORA40.19-201ENST00000390846 DUOX1Q9NRD9 1551 aa0□□□□□ -2.41
SNORA40.19-201ENST00000390846 DNAH1Q9P2D7 4330 aa-0□□□□□ -2.41
SNORA40.19-201ENST00000390846 MGAQ8IWI9 3026 aa-0□□□□□ -2.41
SNORA40.19-201ENST00000390846 USP9XQ93008 2570 aaPredicted RBP-0□□□□□ -2.41
SNORA40.19-201ENST00000390846 MROH2BQ7Z745 1585 aa-0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 ADGRG4Q8IZF6 3080 aa-0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 C5orf42Q9H799 3197 aa-0.01□□□□□ -2.41
SNORA40.19-201ENST00000390846 CLPSL2Q6UWE3 100 aa-0.02□□□□□ -2.41
SNORA40.19-201ENST00000390846 RELNP78509 3460 aa-0.02□□□□□ -2.41
SNORA40.19-201ENST00000390846 POLR2KP53803 58 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.19-201ENST00000390846 DEFB131AP59861 70 aa-0.03□□□□□ -2.41
SNORA40.19-201ENST00000390846 ZFHX4Q86UP3 3567 aa-0.04□□□□□ -2.42
SNORA40.19-201ENST00000390846 SMR3BP02814 79 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.19-201ENST00000390846 TNP1P09430 55 aa-0.04□□□□□ -2.42
SNORA40.19-201ENST00000390846 MGAM2Q2M2H8 2515 aa-0.04□□□□□ -2.42
SNORA40.19-201ENST00000390846 ITPR1Q14643 2758 aa-0.04□□□□□ -2.42
SNORA40.19-201ENST00000390846 MUC2Q02817 5179 aa-0.05□□□□□ -2.42
SNORA40.19-201ENST00000390846 KRTAP8-1Q8IUC2 63 aa-0.05□□□□□ -2.42
SNORA40.19-201ENST00000390846 LAMA3Q16787 3333 aa-0.05□□□□□ -2.42
SNORA40.19-201ENST00000390846 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
SNORA40.19-201ENST00000390846 A8MTW9 85 aa-0.06□□□□□ -2.42
SNORA40.19-201ENST00000390846 GCC2Q8IWJ2 1684 aa-0.06□□□□□ -2.42
SNORA40.19-201ENST00000390846 HERC1Q15751 4861 aa-0.06□□□□□ -2.42
SNORA40.19-201ENST00000390846 AHNAKQ09666 5890 aaKnown RBP-0.06□□□□□ -2.42
SNORA40.19-201ENST00000390846 DMXL2Q8TDJ6 3036 aa-0.06□□□□□ -2.42
SNORA40.19-201ENST00000390846 CFAP54Q96N23 3096 aa-0.07□□□□□ -2.42
SNORA40.19-201ENST00000390846 CSMD1Q96PZ7 3565 aa-0.07□□□□□ -2.42
SNORA40.19-201ENST00000390846 M0QZ58 72 aa-0.07□□□□□ -2.42
SNORA40.19-201ENST00000390846 RPL39P62891 51 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.19-201ENST00000390846 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
SNORA40.19-201ENST00000390846 PCLOQ9Y6V0 5065 aa-0.08□□□□□ -2.42
SNORA40.19-201ENST00000390846 DNAH10Q8IVF4 4471 aa-0.08□□□□□ -2.42
SNORA40.19-201ENST00000390846 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
SNORA40.19-201ENST00000390846 SRCAPQ6ZRS2 3230 aa-0.09□□□□□ -2.42
SNORA40.19-201ENST00000390846 PLECQ15149 4684 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.19-201ENST00000390846 SPTAN1Q13813 2472 aaKnown RBP-0.1□□□□□ -2.43
SNORA40.19-201ENST00000390846 CMYA5Q8N3K9 4069 aa-0.11□□□□□ -2.43
SNORA40.19-201ENST00000390846 RPL39LQ96EH5 51 aaKnown RBP-0.11□□□□□ -2.43
SNORA40.19-201ENST00000390846 TEX15Q9BXT5 2789 aa-0.11□□□□□ -2.43
SNORA40.19-201ENST00000390846 MUC12Q9UKN1 5478 aa-0.12□□□□□ -2.43
SNORA40.19-201ENST00000390846 TRRAPQ9Y4A5 3859 aa-0.13□□□□□ -2.43
SNORA40.19-201ENST00000390846 KMT2CQ8NEZ4 4911 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.19-201ENST00000390846 ATMQ13315 3056 aa-0.13□□□□□ -2.43
SNORA40.19-201ENST00000390846 SNRPGP62308 76 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.19-201ENST00000390846 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
SNORA40.19-201ENST00000390846 LEAP2Q969E1 77 aa-0.13□□□□□ -2.43
SNORA40.19-201ENST00000390846 MUC17Q685J3 4493 aa-0.13□□□□□ -2.43
SNORA40.19-201ENST00000390846 DOPEY1Q5JWR5 2465 aa-0.14□□□□□ -2.43
SNORA40.19-201ENST00000390846 KRTAP19-8Q3LI54 63 aa-0.14□□□□□ -2.43
SNORA40.19-201ENST00000390846 LRBAP50851 2863 aa-0.14□□□□□ -2.43
SNORA40.19-201ENST00000390846 UBR4Q5T4S7 5183 aa-0.15□□□□□ -2.43
SNORA40.19-201ENST00000390846 DYNC1H1Q14204 4646 aaKnown RBP-0.15□□□□□ -2.43
SNORA40.19-201ENST00000390846 DNAH17Q9UFH2 4485 aa-0.15□□□□□ -2.43
SNORA40.19-201ENST00000390846 USH2AO75445 5202 aa-0.15□□□□□ -2.43
SNORA40.19-201ENST00000390846 CFAP46Q8IYW2 2715 aa-0.16□□□□□ -2.43
SNORA40.19-201ENST00000390846 LAMA2P24043 3122 aaKnown RBP-0.16□□□□□ -2.43
SNORA40.19-201ENST00000390846 EYSQ5T1H1 3165 aa-0.16□□□□□ -2.44
SNORA40.19-201ENST00000390846 SPART-AS1P0CW21 52 aa-0.17□□□□□ -2.44
SNORA40.19-201ENST00000390846 DEFB1P60022 68 aa-0.18□□□□□ -2.44
SNORA40.19-201ENST00000390846 DEFB104AQ8WTQ1 72 aa-0.18□□□□□ -2.44
SNORA40.19-201ENST00000390846 TOMM7Q9P0U1 55 aa-0.18□□□□□ -2.44
SNORA40.19-201ENST00000390846 PRUNE2Q8WUY3 3088 aa-0.19□□□□□ -2.44
SNORA40.19-201ENST00000390846 MT1HP80294 61 aa-0.2□□□□□ -2.44
SNORA40.19-201ENST00000390846 FRYLO94915 3013 aa-0.21□□□□□ -2.44
SNORA40.19-201ENST00000390846 DNAH12Q6ZR08 3092 aa-0.21□□□□□ -2.44
SNORA40.19-201ENST00000390846 SMG1Q96Q15 3661 aaKnown RBP-0.21□□□□□ -2.44
SNORA40.19-201ENST00000390846 DNAH5Q8TE73 4624 aa-0.22□□□□□ -2.44
SNORA40.19-201ENST00000390846 CEP250Q9BV73 2442 aa-0.22□□□□□ -2.44
SNORA40.19-201ENST00000390846 RYR1P21817 5038 aa-0.22□□□□□ -2.44
SNORA40.19-201ENST00000390846 MYO9AB2RTY4 2548 aa-0.22□□□□□ -2.44
SNORA40.19-201ENST00000390846 KRTAP20-2Q3LI61 65 aa-0.23□□□□□ -2.45
SNORA40.19-201ENST00000390846 NIPBLQ6KC79 2804 aaeCLIP-0.23□□□□□ -2.45
SNORA40.19-201ENST00000390846 CSMD2Q7Z408 3487 aa-0.23□□□□□ -2.45
SNORA40.19-201ENST00000390846 WDFY4Q6ZS81 3184 aa-0.24□□□□□ -2.45
SNORA40.19-201ENST00000390846 TLN1Q9Y490 2541 aaKnown RBP-0.24□□□□□ -2.45
SNORA40.19-201ENST00000390846 DNHD1Q96M86 4753 aa-0.24□□□□□ -2.45
SNORA40.19-201ENST00000390846 MUC3AQ02505 3323 aa-0.24□□□□□ -2.45
SNORA40.19-201ENST00000390846 ITPR2Q14571 2701 aa-0.25□□□□□ -2.45
SNORA40.19-201ENST00000390846 MYO15AQ9UKN7 3530 aa-0.25□□□□□ -2.45
SNORA40.19-201ENST00000390846 MT1EP04732 61 aa-0.25□□□□□ -2.45
SNORA40.19-201ENST00000390846 VPS13CQ709C8 3753 aa-0.26□□□□□ -2.45
SNORA40.19-201ENST00000390846 MT1XP80297 61 aa-0.27□□□□□ -2.45
SNORA40.19-201ENST00000390846 HERC2O95714 4834 aa-0.27□□□□□ -2.45
SNORA40.19-201ENST00000390846 ARHGAP5-AS1Q96IT6 56 aa-0.28□□□□□ -2.45
SNORA40.19-201ENST00000390846 DMDP11532 3685 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms