RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 DNAH11Q96DT5 4516 aa6.98□□□□□ -1.29
PSME4-201ENST00000389993 FRAS1Q86XX4 4008 aa6.97□□□□□ -1.29
PSME4-201ENST00000389993 DNHD1Q96M86 4753 aa6.94□□□□□ -1.3
PSME4-201ENST00000389993 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
PSME4-201ENST00000389993 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
PSME4-201ENST00000389993 DNAH5Q8TE73 4624 aa6.92□□□□□ -1.3
PSME4-201ENST00000389993 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
PSME4-201ENST00000389993 DNAH3Q8TD57 4116 aa6.85□□□□□ -1.31
PSME4-201ENST00000389993 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
PSME4-201ENST00000389993 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
PSME4-201ENST00000389993 VPS13DQ5THJ4 4388 aa6.83□□□□□ -1.32
PSME4-201ENST00000389993 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
PSME4-201ENST00000389993 DNAH8Q96JB1 4490 aa6.8□□□□□ -1.32
PSME4-201ENST00000389993 DNAH2Q9P225 4427 aa6.8□□□□□ -1.32
PSME4-201ENST00000389993 FAT1Q14517 4588 aa6.76□□□□□ -1.33
PSME4-201ENST00000389993 KRTAP3-3Q9BYR6 98 aa6.75□□□□□ -1.33
PSME4-201ENST00000389993 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
PSME4-201ENST00000389993 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
PSME4-201ENST00000389993 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.33
PSME4-201ENST00000389993 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
PSME4-201ENST00000389993 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.35
PSME4-201ENST00000389993 DYNC2H1Q8NCM8 4307 aaKnown RBP6.64□□□□□ -1.35
PSME4-201ENST00000389993 FAT2Q9NYQ8 4349 aa6.63□□□□□ -1.35
PSME4-201ENST00000389993 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
PSME4-201ENST00000389993 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
PSME4-201ENST00000389993 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
PSME4-201ENST00000389993 HECTD4Q9Y4D8 3996 aa6.53□□□□□ -1.36
PSME4-201ENST00000389993 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
PSME4-201ENST00000389993 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
PSME4-201ENST00000389993 CRCT1Q9UGL9 99 aa6.47□□□□□ -1.37
PSME4-201ENST00000389993 RYR1P21817 5038 aa6.42□□□□□ -1.38
PSME4-201ENST00000389993 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
PSME4-201ENST00000389993 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
PSME4-201ENST00000389993 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
PSME4-201ENST00000389993 PKHD1P08F94 4074 aa6.36□□□□□ -1.39
PSME4-201ENST00000389993 FAT3Q8TDW7 4589 aa6.35□□□□□ -1.39
PSME4-201ENST00000389993 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
PSME4-201ENST00000389993 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
PSME4-201ENST00000389993 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
PSME4-201ENST00000389993 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
PSME4-201ENST00000389993 LPAP08519 4548 aa6.18□□□□□ -1.42
PSME4-201ENST00000389993 RYR3Q15413 4870 aa6.17□□□□□ -1.42
PSME4-201ENST00000389993 MT1HP80294 61 aa6.16□□□□□ -1.42
PSME4-201ENST00000389993 HSPG2P98160 4391 aa6.14□□□□□ -1.43
PSME4-201ENST00000389993 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
PSME4-201ENST00000389993 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
PSME4-201ENST00000389993 PKD1P98161 4303 aa6.04□□□□□ -1.44
PSME4-201ENST00000389993 MT2AP02795 61 aa6□□□□□ -1.45
PSME4-201ENST00000389993 MT1FP04733 61 aa5.98□□□□□ -1.45
PSME4-201ENST00000389993 RYR2Q92736 4967 aa5.93□□□□□ -1.46
PSME4-201ENST00000389993 LRP2P98164 4655 aa5.92□□□□□ -1.46
PSME4-201ENST00000389993 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
PSME4-201ENST00000389993 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
PSME4-201ENST00000389993 PKHD1L1Q86WI1 4243 aa5.86□□□□□ -1.47
PSME4-201ENST00000389993 TNXBP22105 4242 aa5.84□□□□□ -1.47
PSME4-201ENST00000389993 SPRR2GQ9BYE4 73 aa5.75□□□□□ -1.49
PSME4-201ENST00000389993 HERC2O95714 4834 aa5.75□□□□□ -1.49
PSME4-201ENST00000389993 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
PSME4-201ENST00000389993 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
PSME4-201ENST00000389993 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
PSME4-201ENST00000389993 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
PSME4-201ENST00000389993 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
PSME4-201ENST00000389993 EPPK1P58107 5090 aaKnown RBP5.59□□□□□ -1.51
PSME4-201ENST00000389993 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
PSME4-201ENST00000389993 BIRC6Q9NR09 4857 aa5.48□□□□□ -1.53
PSME4-201ENST00000389993 INE1O15225 51 aa5.47□□□□□ -1.53
PSME4-201ENST00000389993 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
PSME4-201ENST00000389993 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
PSME4-201ENST00000389993 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
PSME4-201ENST00000389993 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
PSME4-201ENST00000389993 MT1XP80297 61 aa5.42□□□□□ -1.54
PSME4-201ENST00000389993 MT1BP07438 61 aa5.39□□□□□ -1.55
PSME4-201ENST00000389993 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
PSME4-201ENST00000389993 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
PSME4-201ENST00000389993 HERC1Q15751 4861 aa5.36□□□□□ -1.55
PSME4-201ENST00000389993 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
PSME4-201ENST00000389993 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
PSME4-201ENST00000389993 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
PSME4-201ENST00000389993 SPRR2EP22531 72 aa5.26□□□□□ -1.57
PSME4-201ENST00000389993 SPRR2BP35325 72 aa5.26□□□□□ -1.57
PSME4-201ENST00000389993 SPRR2AP35326 72 aa5.26□□□□□ -1.57
PSME4-201ENST00000389993 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
PSME4-201ENST00000389993 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
PSME4-201ENST00000389993 MT1GP13640 62 aa5.24□□□□□ -1.57
PSME4-201ENST00000389993 KRTAP19-2Q3LHN2 52 aa5.24□□□□□ -1.57
PSME4-201ENST00000389993 MUC2Q02817 5179 aa5.21□□□□□ -1.58
PSME4-201ENST00000389993 LCE2BO14633 110 aa5.2□□□□□ -1.58
PSME4-201ENST00000389993 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
PSME4-201ENST00000389993 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
PSME4-201ENST00000389993 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
PSME4-201ENST00000389993 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
PSME4-201ENST00000389993 SPRR2DP22532 72 aa5.04□□□□□ -1.6
PSME4-201ENST00000389993 FAT4Q6V0I7 4981 aa5.03□□□□□ -1.6
PSME4-201ENST00000389993 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
PSME4-201ENST00000389993 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
PSME4-201ENST00000389993 RNF213Q63HN8 5207 aa4.9□□□□□ -1.62
PSME4-201ENST00000389993 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.62
PSME4-201ENST00000389993 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
PSME4-201ENST00000389993 MT1LQ93083 61 aa4.81□□□□□ -1.64
PSME4-201ENST00000389993 MT1EP04732 61 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms