RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 LUZP6Q538Z0 58 aa10.77□□□□□ -0.68
NKX3-2-201ENST00000382438 XP32Q5T750 250 aa10.63□□□□□ -0.71
NKX3-2-201ENST00000382438 PKD1P98161 4303 aa10.63□□□□□ -0.71
NKX3-2-201ENST00000382438 KRTAP12-1P59990 96 aa10.62□□□□□ -0.71
NKX3-2-201ENST00000382438 RPS29P62273 56 aaKnown RBP10.58□□□□□ -0.72
NKX3-2-201ENST00000382438 KRTAP21-3Q3LHN1 58 aa10.54□□□□□ -0.72
NKX3-2-201ENST00000382438 PKHD1P08F94 4074 aa10.52□□□□□ -0.73
NKX3-2-201ENST00000382438 HYDINQ4G0P3 5121 aa10.48□□□□□ -0.73
NKX3-2-201ENST00000382438 KRTAP10-8P60410 259 aa10.46□□□□□ -0.74
NKX3-2-201ENST00000382438 SACSQ9NZJ4 4579 aa10.45□□□□□ -0.74
NKX3-2-201ENST00000382438 PLAC4Q8WY50 150 aa10.43□□□□□ -0.74
NKX3-2-201ENST00000382438 SMR3BP02814 79 aaPredicted RBP10.4□□□□□ -0.74
NKX3-2-201ENST00000382438 FAT1Q14517 4588 aa10.37□□□□□ -0.75
NKX3-2-201ENST00000382438 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
NKX3-2-201ENST00000382438 APOBP04114 4563 aaKnown RBP10.35□□□□□ -0.75
NKX3-2-201ENST00000382438 HSPG2P98160 4391 aa10.34□□□□□ -0.75
NKX3-2-201ENST00000382438 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
NKX3-2-201ENST00000382438 MYCBP2O75592 4640 aa10.24□□□□□ -0.77
NKX3-2-201ENST00000382438 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.77
NKX3-2-201ENST00000382438 M0QZ58 72 aa10.15□□□□□ -0.78
NKX3-2-201ENST00000382438 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
NKX3-2-201ENST00000382438 LPAP08519 4548 aa10.02□□□□□ -0.81
NKX3-2-201ENST00000382438 KRTAP10-4P60372 401 aaPredicted RBP9.93□□□□□ -0.82
NKX3-2-201ENST00000382438 R4GN34 69 aa9.89□□□□□ -0.83
NKX3-2-201ENST00000382438 TNXBP22105 4242 aa9.89□□□□□ -0.83
NKX3-2-201ENST00000382438 KMT2CQ8NEZ4 4911 aaKnown RBP9.85□□□□□ -0.83
NKX3-2-201ENST00000382438 SEC61BP60468 96 aaKnown RBP9.77□□□□□ -0.85
NKX3-2-201ENST00000382438 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
NKX3-2-201ENST00000382438 LRP2P98164 4655 aa9.68□□□□□ -0.86
NKX3-2-201ENST00000382438 PP632Q6XCG6 107 aa9.64□□□□□ -0.87
NKX3-2-201ENST00000382438 RYR3Q15413 4870 aa9.64□□□□□ -0.87
NKX3-2-201ENST00000382438 RYR2Q92736 4967 aa9.59□□□□□ -0.87
NKX3-2-201ENST00000382438 A0A1B0GVY2 172 aa9.58□□□□□ -0.88
NKX3-2-201ENST00000382438 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
NKX3-2-201ENST00000382438 SPRR5A0A1B0GTR4 108 aa9.38□□□□□ -0.91
NKX3-2-201ENST00000382438 EPPK1P58107 5090 aaKnown RBP9.33□□□□□ -0.92
NKX3-2-201ENST00000382438 PRO2289Q9P1D8 64 aa9.33□□□□□ -0.92
NKX3-2-201ENST00000382438 Q5VSD8 79 aa9.3□□□□□ -0.92
NKX3-2-201ENST00000382438 KRTAP17-1Q9BYP8 105 aa9.27□□□□□ -0.93
NKX3-2-201ENST00000382438 RYR1P21817 5038 aa9.21□□□□□ -0.93
NKX3-2-201ENST00000382438 KIAA1109Q2LD37 5005 aa9.2□□□□□ -0.94
NKX3-2-201ENST00000382438 TNP1P09430 55 aa9.19□□□□□ -0.94
NKX3-2-201ENST00000382438 MT1HL1P0DM35 61 aa9.09□□□□□ -0.96
NKX3-2-201ENST00000382438 MUC17Q685J3 4493 aa9.04□□□□□ -0.96
NKX3-2-201ENST00000382438 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.96
NKX3-2-201ENST00000382438 KRTAP23-1A1A580 65 aa8.96□□□□□ -0.98
NKX3-2-201ENST00000382438 INE1O15225 51 aa8.95□□□□□ -0.98
NKX3-2-201ENST00000382438 KRTAP4-1Q9BYQ7 146 aa8.89□□□□□ -0.99
NKX3-2-201ENST00000382438 BIRC6Q9NR09 4857 aa8.87□□□□□ -0.99
NKX3-2-201ENST00000382438 KRTAP4-5Q9BYR2 181 aa8.82□□□□□ -1
NKX3-2-201ENST00000382438 MUC2Q02817 5179 aa8.71□□□□□ -1.01
NKX3-2-201ENST00000382438 LCE3AQ5TA76 89 aa8.7□□□□□ -1.02
NKX3-2-201ENST00000382438 HERC2O95714 4834 aa8.68□□□□□ -1.02
NKX3-2-201ENST00000382438 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
NKX3-2-201ENST00000382438 PCLOQ9Y6V0 5065 aa8.64□□□□□ -1.03
NKX3-2-201ENST00000382438 FLGP20930 4061 aaPredicted RBP8.58□□□□□ -1.04
NKX3-2-201ENST00000382438 HERC1Q15751 4861 aa8.45□□□□□ -1.06
NKX3-2-201ENST00000382438 J3QL48 77 aa8.35□□□□□ -1.07
NKX3-2-201ENST00000382438 KRTAP8-1Q8IUC2 63 aa8.3□□□□□ -1.08
NKX3-2-201ENST00000382438 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
NKX3-2-201ENST00000382438 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
NKX3-2-201ENST00000382438 KRTAP10-12P60413 245 aa8.21□□□□□ -1.09
NKX3-2-201ENST00000382438 SPRR2GQ9BYE4 73 aa8.19□□□□□ -1.1
NKX3-2-201ENST00000382438 KRTAP12-3P60328 96 aa8.17□□□□□ -1.1
NKX3-2-201ENST00000382438 KRTAP10-10P60014 251 aa8.06□□□□□ -1.12
NKX3-2-201ENST00000382438 HMCN2Q8NDA2 5059 aa8.03□□□□□ -1.12
NKX3-2-201ENST00000382438 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
NKX3-2-201ENST00000382438 RNF213Q63HN8 5207 aa7.9□□□□□ -1.14
NKX3-2-201ENST00000382438 KRTAP10-5P60370 271 aa7.87□□□□□ -1.15
NKX3-2-201ENST00000382438 M0R2T5 61 aa7.86□□□□□ -1.15
NKX3-2-201ENST00000382438 MT1XP80297 61 aa7.83□□□□□ -1.16
NKX3-2-201ENST00000382438 KRTAP10-7P60409 375 aaPredicted RBP7.81□□□□□ -1.16
NKX3-2-201ENST00000382438 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
NKX3-2-201ENST00000382438 MT1FP04733 61 aa7.77□□□□□ -1.17
NKX3-2-201ENST00000382438 LCE3CQ5T5A8 94 aa7.72□□□□□ -1.17
NKX3-2-201ENST00000382438 MT2AP02795 61 aa7.67□□□□□ -1.18
NKX3-2-201ENST00000382438 KRTAP9-6A8MVA2 160 aa7.67□□□□□ -1.18
NKX3-2-201ENST00000382438 MT1BP07438 61 aa7.66□□□□□ -1.18
NKX3-2-201ENST00000382438 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
NKX3-2-201ENST00000382438 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
NKX3-2-201ENST00000382438 KMT2DO14686 5537 aa7.58□□□□□ -1.2
NKX3-2-201ENST00000382438 MT1HP80294 61 aa7.56□□□□□ -1.2
NKX3-2-201ENST00000382438 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.21
NKX3-2-201ENST00000382438 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.21
NKX3-2-201ENST00000382438 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.21
NKX3-2-201ENST00000382438 KRTAP9-8Q9BYQ0 159 aa7.51□□□□□ -1.21
NKX3-2-201ENST00000382438 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
NKX3-2-201ENST00000382438 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
NKX3-2-201ENST00000382438 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
NKX3-2-201ENST00000382438 USH2AO75445 5202 aa7.19□□□□□ -1.26
NKX3-2-201ENST00000382438 KRTAP9-3Q9BYQ3 159 aa7.11□□□□□ -1.27
NKX3-2-201ENST00000382438 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
NKX3-2-201ENST00000382438 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.29
NKX3-2-201ENST00000382438 LCE2AQ5TA79 106 aaPredicted RBP6.95□□□□□ -1.3
NKX3-2-201ENST00000382438 LCE2BO14633 110 aa6.85□□□□□ -1.31
NKX3-2-201ENST00000382438 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
NKX3-2-201ENST00000382438 MT1LQ93083 61 aa6.81□□□□□ -1.32
NKX3-2-201ENST00000382438 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
NKX3-2-201ENST00000382438 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
NKX3-2-201ENST00000382438 MT1EP04732 61 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms