RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
PPM1B-204ENST00000378551 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
PPM1B-204ENST00000378551 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
PPM1B-204ENST00000378551 HYDINQ4G0P3 5121 aa7.79□□□□□ -1.16
PPM1B-204ENST00000378551 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
PPM1B-204ENST00000378551 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
PPM1B-204ENST00000378551 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
PPM1B-204ENST00000378551 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
PPM1B-204ENST00000378551 M0R2T5 61 aa7.74□□□□□ -1.17
PPM1B-204ENST00000378551 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
PPM1B-204ENST00000378551 KRTAP10-6P60371 365 aaPredicted RBP7.72□□□□□ -1.17
PPM1B-204ENST00000378551 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
PPM1B-204ENST00000378551 DYNC2H1Q8NCM8 4307 aaKnown RBP7.67□□□□□ -1.18
PPM1B-204ENST00000378551 LUZP6Q538Z0 58 aa7.66□□□□□ -1.18
PPM1B-204ENST00000378551 KIAA1109Q2LD37 5005 aa7.63□□□□□ -1.19
PPM1B-204ENST00000378551 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
PPM1B-204ENST00000378551 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
PPM1B-204ENST00000378551 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
PPM1B-204ENST00000378551 RYR1P21817 5038 aa7.59□□□□□ -1.19
PPM1B-204ENST00000378551 KRTAP12-1P59990 96 aa7.57□□□□□ -1.2
PPM1B-204ENST00000378551 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
PPM1B-204ENST00000378551 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
PPM1B-204ENST00000378551 ALMS1Q8TCU4 4167 aa7.55□□□□□ -1.2
PPM1B-204ENST00000378551 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
PPM1B-204ENST00000378551 KRTAP4-5Q9BYR2 181 aa7.45□□□□□ -1.22
PPM1B-204ENST00000378551 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
PPM1B-204ENST00000378551 KRTAP21-3Q3LHN1 58 aa7.42□□□□□ -1.22
PPM1B-204ENST00000378551 RYR3Q15413 4870 aa7.39□□□□□ -1.23
PPM1B-204ENST00000378551 KMT2CQ8NEZ4 4911 aaKnown RBP7.39□□□□□ -1.23
PPM1B-204ENST00000378551 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
PPM1B-204ENST00000378551 LRP2P98164 4655 aa7.39□□□□□ -1.23
PPM1B-204ENST00000378551 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
PPM1B-204ENST00000378551 KRTAP17-1Q9BYP8 105 aa7.26□□□□□ -1.25
PPM1B-204ENST00000378551 HSPG2P98160 4391 aa7.23□□□□□ -1.25
PPM1B-204ENST00000378551 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
PPM1B-204ENST00000378551 PKD1P98161 4303 aa7.22□□□□□ -1.25
PPM1B-204ENST00000378551 TNP1P09430 55 aa7.22□□□□□ -1.25
PPM1B-204ENST00000378551 LPAP08519 4548 aa7.15□□□□□ -1.26
PPM1B-204ENST00000378551 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
PPM1B-204ENST00000378551 RYR2Q92736 4967 aa7.11□□□□□ -1.27
PPM1B-204ENST00000378551 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
PPM1B-204ENST00000378551 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
PPM1B-204ENST00000378551 KRTAP4-1Q9BYQ7 146 aa7.04□□□□□ -1.28
PPM1B-204ENST00000378551 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
PPM1B-204ENST00000378551 MUC2Q02817 5179 aa6.95□□□□□ -1.3
PPM1B-204ENST00000378551 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
PPM1B-204ENST00000378551 HERC2O95714 4834 aa6.88□□□□□ -1.31
PPM1B-204ENST00000378551 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
PPM1B-204ENST00000378551 TNXBP22105 4242 aa6.74□□□□□ -1.33
PPM1B-204ENST00000378551 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
PPM1B-204ENST00000378551 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
PPM1B-204ENST00000378551 PCLOQ9Y6V0 5065 aa6.59□□□□□ -1.35
PPM1B-204ENST00000378551 HERC1Q15751 4861 aa6.56□□□□□ -1.36
PPM1B-204ENST00000378551 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
PPM1B-204ENST00000378551 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
PPM1B-204ENST00000378551 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
PPM1B-204ENST00000378551 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
PPM1B-204ENST00000378551 PRO2289Q9P1D8 64 aa6.32□□□□□ -1.4
PPM1B-204ENST00000378551 MT1FP04733 61 aa6.31□□□□□ -1.4
PPM1B-204ENST00000378551 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
PPM1B-204ENST00000378551 MT1HP80294 61 aa6.28□□□□□ -1.4
PPM1B-204ENST00000378551 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
PPM1B-204ENST00000378551 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
PPM1B-204ENST00000378551 MT2AP02795 61 aa6.26□□□□□ -1.41
PPM1B-204ENST00000378551 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
PPM1B-204ENST00000378551 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
PPM1B-204ENST00000378551 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
PPM1B-204ENST00000378551 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.43
PPM1B-204ENST00000378551 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
PPM1B-204ENST00000378551 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
PPM1B-204ENST00000378551 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
PPM1B-204ENST00000378551 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
PPM1B-204ENST00000378551 USH2AO75445 5202 aa6.04□□□□□ -1.44
PPM1B-204ENST00000378551 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
PPM1B-204ENST00000378551 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
PPM1B-204ENST00000378551 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
PPM1B-204ENST00000378551 KMT2DO14686 5537 aa5.92□□□□□ -1.46
PPM1B-204ENST00000378551 MT1XP80297 61 aa5.91□□□□□ -1.46
PPM1B-204ENST00000378551 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
PPM1B-204ENST00000378551 MT1BP07438 61 aa5.89□□□□□ -1.47
PPM1B-204ENST00000378551 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
PPM1B-204ENST00000378551 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
PPM1B-204ENST00000378551 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
PPM1B-204ENST00000378551 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
PPM1B-204ENST00000378551 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
PPM1B-204ENST00000378551 INE1O15225 51 aa5.76□□□□□ -1.49
PPM1B-204ENST00000378551 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
PPM1B-204ENST00000378551 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
PPM1B-204ENST00000378551 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
PPM1B-204ENST00000378551 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
PPM1B-204ENST00000378551 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
PPM1B-204ENST00000378551 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
PPM1B-204ENST00000378551 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
PPM1B-204ENST00000378551 LCE2BO14633 110 aa5.6□□□□□ -1.51
PPM1B-204ENST00000378551 MT1GP13640 62 aa5.36□□□□□ -1.55
PPM1B-204ENST00000378551 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
PPM1B-204ENST00000378551 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
PPM1B-204ENST00000378551 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
PPM1B-204ENST00000378551 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
PPM1B-204ENST00000378551 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms