RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
PRDM16-203ENST00000378391 CMYA5Q8N3K9 4069 aa7.05□□□□□ -1.28
PRDM16-203ENST00000378391 DNAH17Q9UFH2 4485 aa7.02□□□□□ -1.29
PRDM16-203ENST00000378391 LYSTQ99698 3801 aa7□□□□□ -1.29
PRDM16-203ENST00000378391 VPS13DQ5THJ4 4388 aa7□□□□□ -1.29
PRDM16-203ENST00000378391 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
PRDM16-203ENST00000378391 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
PRDM16-203ENST00000378391 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
PRDM16-203ENST00000378391 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
PRDM16-203ENST00000378391 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
PRDM16-203ENST00000378391 DNAH2Q9P225 4427 aa6.89□□□□□ -1.31
PRDM16-203ENST00000378391 DYNC2H1Q8NCM8 4307 aaKnown RBP6.85□□□□□ -1.31
PRDM16-203ENST00000378391 DNAH7Q8WXX0 4024 aa6.84□□□□□ -1.31
PRDM16-203ENST00000378391 KMT2AQ03164 3969 aa6.81□□□□□ -1.32
PRDM16-203ENST00000378391 HECTD4Q9Y4D8 3996 aa6.81□□□□□ -1.32
PRDM16-203ENST00000378391 KRTAP10-4P60372 401 aaPredicted RBP6.79□□□□□ -1.32
PRDM16-203ENST00000378391 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
PRDM16-203ENST00000378391 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
PRDM16-203ENST00000378391 PRKDCP78527 4128 aaKnown RBP6.66□□□□□ -1.34
PRDM16-203ENST00000378391 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.35
PRDM16-203ENST00000378391 VPS13BQ7Z7G8 4022 aa6.64□□□□□ -1.35
PRDM16-203ENST00000378391 SACSQ9NZJ4 4579 aa6.55□□□□□ -1.36
PRDM16-203ENST00000378391 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
PRDM16-203ENST00000378391 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
PRDM16-203ENST00000378391 FAT1Q14517 4588 aa6.48□□□□□ -1.37
PRDM16-203ENST00000378391 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.38
PRDM16-203ENST00000378391 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
PRDM16-203ENST00000378391 KRTAP10-12P60413 245 aa6.34□□□□□ -1.4
PRDM16-203ENST00000378391 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
PRDM16-203ENST00000378391 DNHD1Q96M86 4753 aa6.29□□□□□ -1.4
PRDM16-203ENST00000378391 PKD1P98161 4303 aa6.28□□□□□ -1.4
PRDM16-203ENST00000378391 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
PRDM16-203ENST00000378391 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
PRDM16-203ENST00000378391 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
PRDM16-203ENST00000378391 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
PRDM16-203ENST00000378391 PKHD1P08F94 4074 aa6.18□□□□□ -1.42
PRDM16-203ENST00000378391 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
PRDM16-203ENST00000378391 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
PRDM16-203ENST00000378391 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
PRDM16-203ENST00000378391 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
PRDM16-203ENST00000378391 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
PRDM16-203ENST00000378391 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
PRDM16-203ENST00000378391 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
PRDM16-203ENST00000378391 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
PRDM16-203ENST00000378391 HSPG2P98160 4391 aa5.95□□□□□ -1.46
PRDM16-203ENST00000378391 TNXBP22105 4242 aa5.93□□□□□ -1.46
PRDM16-203ENST00000378391 RYR1P21817 5038 aa5.92□□□□□ -1.46
PRDM16-203ENST00000378391 RYR2Q92736 4967 aa5.87□□□□□ -1.47
PRDM16-203ENST00000378391 LRP2P98164 4655 aa5.85□□□□□ -1.47
PRDM16-203ENST00000378391 KMT2CQ8NEZ4 4911 aaKnown RBP5.79□□□□□ -1.48
PRDM16-203ENST00000378391 KIAA1109Q2LD37 5005 aa5.78□□□□□ -1.48
PRDM16-203ENST00000378391 RYR3Q15413 4870 aa5.77□□□□□ -1.49
PRDM16-203ENST00000378391 LPAP08519 4548 aa5.74□□□□□ -1.49
PRDM16-203ENST00000378391 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
PRDM16-203ENST00000378391 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
PRDM16-203ENST00000378391 MT1HP80294 61 aa5.63□□□□□ -1.51
PRDM16-203ENST00000378391 MT2AP02795 61 aa5.63□□□□□ -1.51
PRDM16-203ENST00000378391 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
PRDM16-203ENST00000378391 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
PRDM16-203ENST00000378391 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
PRDM16-203ENST00000378391 MT1FP04733 61 aa5.5□□□□□ -1.53
PRDM16-203ENST00000378391 KRTAP19-2Q3LHN2 52 aa5.49□□□□□ -1.53
PRDM16-203ENST00000378391 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.53
PRDM16-203ENST00000378391 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
PRDM16-203ENST00000378391 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
PRDM16-203ENST00000378391 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
PRDM16-203ENST00000378391 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
PRDM16-203ENST00000378391 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
PRDM16-203ENST00000378391 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
PRDM16-203ENST00000378391 HERC2O95714 4834 aa5.31□□□□□ -1.56
PRDM16-203ENST00000378391 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
PRDM16-203ENST00000378391 MT1XP80297 61 aa5.29□□□□□ -1.56
PRDM16-203ENST00000378391 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
PRDM16-203ENST00000378391 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
PRDM16-203ENST00000378391 MT3P25713 68 aa5.26□□□□□ -1.57
PRDM16-203ENST00000378391 HERC1Q15751 4861 aa5.26□□□□□ -1.57
PRDM16-203ENST00000378391 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
PRDM16-203ENST00000378391 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
PRDM16-203ENST00000378391 MT1BP07438 61 aa5.23□□□□□ -1.57
PRDM16-203ENST00000378391 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
PRDM16-203ENST00000378391 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
PRDM16-203ENST00000378391 MUC2Q02817 5179 aa5.02□□□□□ -1.61
PRDM16-203ENST00000378391 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
PRDM16-203ENST00000378391 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
PRDM16-203ENST00000378391 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
PRDM16-203ENST00000378391 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
PRDM16-203ENST00000378391 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
PRDM16-203ENST00000378391 SPRR2EP22531 72 aa4.93□□□□□ -1.62
PRDM16-203ENST00000378391 SPRR2BP35325 72 aa4.93□□□□□ -1.62
PRDM16-203ENST00000378391 SPRR2AP35326 72 aa4.93□□□□□ -1.62
PRDM16-203ENST00000378391 MT1GP13640 62 aa4.92□□□□□ -1.62
PRDM16-203ENST00000378391 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
PRDM16-203ENST00000378391 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
PRDM16-203ENST00000378391 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
PRDM16-203ENST00000378391 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
PRDM16-203ENST00000378391 SPRR2DP22532 72 aa4.8□□□□□ -1.64
PRDM16-203ENST00000378391 LCE2BO14633 110 aa4.78□□□□□ -1.64
PRDM16-203ENST00000378391 RNF213Q63HN8 5207 aa4.77□□□□□ -1.65
PRDM16-203ENST00000378391 MT1LQ93083 61 aa4.71□□□□□ -1.66
PRDM16-203ENST00000378391 PRM1P04553 51 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms