RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 PRKDCP78527 4128 aaKnown RBP5.27□□□□□ -1.57
ARHGEF39-201ENST00000378387 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
ARHGEF39-201ENST00000378387 HECTD4Q9Y4D8 3996 aa5.27□□□□□ -1.57
ARHGEF39-201ENST00000378387 VPS13DQ5THJ4 4388 aa5.26□□□□□ -1.57
ARHGEF39-201ENST00000378387 DNAH6Q9C0G6 4158 aa5.25□□□□□ -1.57
ARHGEF39-201ENST00000378387 CAMK2N1Q7Z7J9 78 aa5.25□□□□□ -1.57
ARHGEF39-201ENST00000378387 XP32Q5T750 250 aa5.23□□□□□ -1.57
ARHGEF39-201ENST00000378387 DYNC2H1Q8NCM8 4307 aaKnown RBP5.22□□□□□ -1.57
ARHGEF39-201ENST00000378387 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
ARHGEF39-201ENST00000378387 Q5VSD8 79 aa5.15□□□□□ -1.58
ARHGEF39-201ENST00000378387 J3QL48 77 aa5.13□□□□□ -1.59
ARHGEF39-201ENST00000378387 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
ARHGEF39-201ENST00000378387 FAT1Q14517 4588 aa5.1□□□□□ -1.59
ARHGEF39-201ENST00000378387 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.59
ARHGEF39-201ENST00000378387 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
ARHGEF39-201ENST00000378387 APOBP04114 4563 aaKnown RBP4.97□□□□□ -1.61
ARHGEF39-201ENST00000378387 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
ARHGEF39-201ENST00000378387 DYNC1H1Q14204 4646 aaKnown RBP4.95□□□□□ -1.62
ARHGEF39-201ENST00000378387 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
ARHGEF39-201ENST00000378387 FAT2Q9NYQ8 4349 aa4.93□□□□□ -1.62
ARHGEF39-201ENST00000378387 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
ARHGEF39-201ENST00000378387 PKD1P98161 4303 aa4.9□□□□□ -1.62
ARHGEF39-201ENST00000378387 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.63
ARHGEF39-201ENST00000378387 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
ARHGEF39-201ENST00000378387 KMT2CQ8NEZ4 4911 aaKnown RBP4.88□□□□□ -1.63
ARHGEF39-201ENST00000378387 KIAA1109Q2LD37 5005 aa4.88□□□□□ -1.63
ARHGEF39-201ENST00000378387 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
ARHGEF39-201ENST00000378387 TNP1P09430 55 aa4.87□□□□□ -1.63
ARHGEF39-201ENST00000378387 LCE2DQ5TA82 110 aaPredicted RBP4.87□□□□□ -1.63
ARHGEF39-201ENST00000378387 SACSQ9NZJ4 4579 aa4.87□□□□□ -1.63
ARHGEF39-201ENST00000378387 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
ARHGEF39-201ENST00000378387 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
ARHGEF39-201ENST00000378387 HSPG2P98160 4391 aa4.82□□□□□ -1.64
ARHGEF39-201ENST00000378387 RYR1P21817 5038 aa4.79□□□□□ -1.64
ARHGEF39-201ENST00000378387 M0R2T5 61 aa4.78□□□□□ -1.64
ARHGEF39-201ENST00000378387 RYR3Q15413 4870 aa4.78□□□□□ -1.64
ARHGEF39-201ENST00000378387 KRTAP4-5Q9BYR2 181 aa4.76□□□□□ -1.65
ARHGEF39-201ENST00000378387 LRP2P98164 4655 aa4.73□□□□□ -1.65
ARHGEF39-201ENST00000378387 RYR2Q92736 4967 aa4.67□□□□□ -1.66
ARHGEF39-201ENST00000378387 LPAP08519 4548 aa4.66□□□□□ -1.66
ARHGEF39-201ENST00000378387 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
ARHGEF39-201ENST00000378387 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
ARHGEF39-201ENST00000378387 MT1HL1P0DM35 61 aa4.6□□□□□ -1.67
ARHGEF39-201ENST00000378387 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
ARHGEF39-201ENST00000378387 EPPK1P58107 5090 aaKnown RBP4.56□□□□□ -1.68
ARHGEF39-201ENST00000378387 TNXBP22105 4242 aa4.52□□□□□ -1.69
ARHGEF39-201ENST00000378387 HERC2O95714 4834 aa4.5□□□□□ -1.69
ARHGEF39-201ENST00000378387 INE1O15225 51 aa4.48□□□□□ -1.69
ARHGEF39-201ENST00000378387 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
ARHGEF39-201ENST00000378387 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
ARHGEF39-201ENST00000378387 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
ARHGEF39-201ENST00000378387 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
ARHGEF39-201ENST00000378387 BIRC6Q9NR09 4857 aa4.36□□□□□ -1.71
ARHGEF39-201ENST00000378387 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
ARHGEF39-201ENST00000378387 KRTAP10-10P60014 251 aa4.35□□□□□ -1.71
ARHGEF39-201ENST00000378387 MUC2Q02817 5179 aa4.34□□□□□ -1.71
ARHGEF39-201ENST00000378387 HERC1Q15751 4861 aa4.33□□□□□ -1.72
ARHGEF39-201ENST00000378387 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
ARHGEF39-201ENST00000378387 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
ARHGEF39-201ENST00000378387 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
ARHGEF39-201ENST00000378387 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
ARHGEF39-201ENST00000378387 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
ARHGEF39-201ENST00000378387 KRTAP10-12P60413 245 aa4.15□□□□□ -1.74
ARHGEF39-201ENST00000378387 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
ARHGEF39-201ENST00000378387 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
ARHGEF39-201ENST00000378387 MUC17Q685J3 4493 aa4.09□□□□□ -1.75
ARHGEF39-201ENST00000378387 KRTAP19-2Q3LHN2 52 aa4.08□□□□□ -1.76
ARHGEF39-201ENST00000378387 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
ARHGEF39-201ENST00000378387 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
ARHGEF39-201ENST00000378387 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
ARHGEF39-201ENST00000378387 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
ARHGEF39-201ENST00000378387 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.77
ARHGEF39-201ENST00000378387 MT1FP04733 61 aa3.95□□□□□ -1.78
ARHGEF39-201ENST00000378387 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
ARHGEF39-201ENST00000378387 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
ARHGEF39-201ENST00000378387 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
ARHGEF39-201ENST00000378387 MT2AP02795 61 aa3.91□□□□□ -1.78
ARHGEF39-201ENST00000378387 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
ARHGEF39-201ENST00000378387 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
ARHGEF39-201ENST00000378387 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
ARHGEF39-201ENST00000378387 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
ARHGEF39-201ENST00000378387 MT1XP80297 61 aa3.89□□□□□ -1.79
ARHGEF39-201ENST00000378387 MT1HP80294 61 aa3.88□□□□□ -1.79
ARHGEF39-201ENST00000378387 LCE2CQ5TA81 110 aa3.85□□□□□ -1.79
ARHGEF39-201ENST00000378387 LCE2BO14633 110 aa3.83□□□□□ -1.8
ARHGEF39-201ENST00000378387 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
ARHGEF39-201ENST00000378387 MT1BP07438 61 aa3.8□□□□□ -1.8
ARHGEF39-201ENST00000378387 KMT2DO14686 5537 aa3.79□□□□□ -1.8
ARHGEF39-201ENST00000378387 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
ARHGEF39-201ENST00000378387 USH2AO75445 5202 aa3.77□□□□□ -1.81
ARHGEF39-201ENST00000378387 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
ARHGEF39-201ENST00000378387 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
ARHGEF39-201ENST00000378387 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
ARHGEF39-201ENST00000378387 KRTAP9-8Q9BYQ0 159 aa3.73□□□□□ -1.81
ARHGEF39-201ENST00000378387 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
ARHGEF39-201ENST00000378387 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
ARHGEF39-201ENST00000378387 LCE2AQ5TA79 106 aaPredicted RBP3.65□□□□□ -1.83
ARHGEF39-201ENST00000378387 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
ARHGEF39-201ENST00000378387 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
ARHGEF39-201ENST00000378387 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms