RNA–Protein interactions for RNA: ENST00000377060.7

CNNM3-202, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 2 BASIC

Gene CNNM3, Length 3,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-202ENST00000377060 NDUFAF8A1L188 74 aa9.77□□□□□ -0.84
CNNM3-202ENST00000377060 RPS29P62273 56 aaKnown RBP9.77□□□□□ -0.85
CNNM3-202ENST00000377060 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
CNNM3-202ENST00000377060 KRTAP10-4P60372 401 aaPredicted RBP9.73□□□□□ -0.85
CNNM3-202ENST00000377060 A0A1B0GVY2 172 aa9.71□□□□□ -0.86
CNNM3-202ENST00000377060 KRTAP10-8P60410 259 aa9.7□□□□□ -0.86
CNNM3-202ENST00000377060 Q5VSD8 79 aa9.7□□□□□ -0.86
CNNM3-202ENST00000377060 HSPG2P98160 4391 aa9.7□□□□□ -0.86
CNNM3-202ENST00000377060 PKHD1L1Q86WI1 4243 aa9.62□□□□□ -0.87
CNNM3-202ENST00000377060 KRTAP13-4Q3LI77 160 aa9.61□□□□□ -0.87
CNNM3-202ENST00000377060 S4R3F8 94 aa9.59□□□□□ -0.87
CNNM3-202ENST00000377060 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
CNNM3-202ENST00000377060 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
CNNM3-202ENST00000377060 XP32Q5T750 250 aa9.56□□□□□ -0.88
CNNM3-202ENST00000377060 RYR2Q92736 4967 aa9.55□□□□□ -0.88
CNNM3-202ENST00000377060 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
CNNM3-202ENST00000377060 LPAP08519 4548 aa9.52□□□□□ -0.88
CNNM3-202ENST00000377060 A0A0A0MQY5 61 aa9.52□□□□□ -0.89
CNNM3-202ENST00000377060 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
CNNM3-202ENST00000377060 KRTAP10-6P60371 365 aaPredicted RBP9.5□□□□□ -0.89
CNNM3-202ENST00000377060 LRP2P98164 4655 aa9.47□□□□□ -0.89
CNNM3-202ENST00000377060 RYR3Q15413 4870 aa9.45□□□□□ -0.9
CNNM3-202ENST00000377060 KRTAP17-1Q9BYP8 105 aa9.44□□□□□ -0.9
CNNM3-202ENST00000377060 RYR1P21817 5038 aa9.43□□□□□ -0.9
CNNM3-202ENST00000377060 KRTAP21-3Q3LHN1 58 aa9.39□□□□□ -0.91
CNNM3-202ENST00000377060 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
CNNM3-202ENST00000377060 TNXBP22105 4242 aa9.37□□□□□ -0.91
CNNM3-202ENST00000377060 KRTAP12-2P59991 146 aa9.32□□□□□ -0.92
CNNM3-202ENST00000377060 MT1HL1P0DM35 61 aa9.2□□□□□ -0.94
CNNM3-202ENST00000377060 ABCA13Q86UQ4 5058 aa9.17□□□□□ -0.94
CNNM3-202ENST00000377060 M0QZ58 72 aa9.16□□□□□ -0.94
CNNM3-202ENST00000377060 EPPK1P58107 5090 aaKnown RBP9.12□□□□□ -0.95
CNNM3-202ENST00000377060 KRTAP15-1Q3LI76 137 aa9.12□□□□□ -0.95
CNNM3-202ENST00000377060 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
CNNM3-202ENST00000377060 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
CNNM3-202ENST00000377060 R4GN34 69 aa9.09□□□□□ -0.95
CNNM3-202ENST00000377060 MUC2Q02817 5179 aa9.01□□□□□ -0.97
CNNM3-202ENST00000377060 J3QL48 77 aa8.95□□□□□ -0.98
CNNM3-202ENST00000377060 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
CNNM3-202ENST00000377060 LUZP6Q538Z0 58 aa8.93□□□□□ -0.98
CNNM3-202ENST00000377060 PLAC4Q8WY50 150 aa8.79□□□□□ -1
CNNM3-202ENST00000377060 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
CNNM3-202ENST00000377060 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
CNNM3-202ENST00000377060 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
CNNM3-202ENST00000377060 HERC2O95714 4834 aa8.7□□□□□ -1.02
CNNM3-202ENST00000377060 FAT4Q6V0I7 4981 aa8.54□□□□□ -1.04
CNNM3-202ENST00000377060 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
CNNM3-202ENST00000377060 HERC1Q15751 4861 aa8.49□□□□□ -1.05
CNNM3-202ENST00000377060 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
CNNM3-202ENST00000377060 M0R2T5 61 aa8.37□□□□□ -1.07
CNNM3-202ENST00000377060 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
CNNM3-202ENST00000377060 KRTAP19-2Q3LHN2 52 aa8.21□□□□□ -1.1
CNNM3-202ENST00000377060 TNP1P09430 55 aa8.18□□□□□ -1.1
CNNM3-202ENST00000377060 FLGP20930 4061 aaPredicted RBP8.14□□□□□ -1.11
CNNM3-202ENST00000377060 UBR4Q5T4S7 5183 aa8.08□□□□□ -1.12
CNNM3-202ENST00000377060 PP632Q6XCG6 107 aa8.06□□□□□ -1.12
CNNM3-202ENST00000377060 HMCN2Q8NDA2 5059 aa8.02□□□□□ -1.13
CNNM3-202ENST00000377060 BIRC6Q9NR09 4857 aa8.01□□□□□ -1.13
CNNM3-202ENST00000377060 KRTAP10-10P60014 251 aa7.98□□□□□ -1.13
CNNM3-202ENST00000377060 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
CNNM3-202ENST00000377060 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
CNNM3-202ENST00000377060 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
CNNM3-202ENST00000377060 MT1FP04733 61 aa7.72□□□□□ -1.17
CNNM3-202ENST00000377060 MT1HP80294 61 aa7.72□□□□□ -1.17
CNNM3-202ENST00000377060 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.18
CNNM3-202ENST00000377060 MT2AP02795 61 aa7.65□□□□□ -1.18
CNNM3-202ENST00000377060 USH2AO75445 5202 aa7.61□□□□□ -1.19
CNNM3-202ENST00000377060 KMT2DO14686 5537 aa7.51□□□□□ -1.21
CNNM3-202ENST00000377060 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
CNNM3-202ENST00000377060 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
CNNM3-202ENST00000377060 PRO2289Q9P1D8 64 aa7.42□□□□□ -1.22
CNNM3-202ENST00000377060 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.22
CNNM3-202ENST00000377060 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
CNNM3-202ENST00000377060 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
CNNM3-202ENST00000377060 MT1BP07438 61 aa7.36□□□□□ -1.23
CNNM3-202ENST00000377060 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
CNNM3-202ENST00000377060 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
CNNM3-202ENST00000377060 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
CNNM3-202ENST00000377060 MT1XP80297 61 aa7.35□□□□□ -1.23
CNNM3-202ENST00000377060 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
CNNM3-202ENST00000377060 KRTAP19-8Q3LI54 63 aa7.21□□□□□ -1.26
CNNM3-202ENST00000377060 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
CNNM3-202ENST00000377060 INE1O15225 51 aa7.1□□□□□ -1.27
CNNM3-202ENST00000377060 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
CNNM3-202ENST00000377060 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
CNNM3-202ENST00000377060 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
CNNM3-202ENST00000377060 LCE2BO14633 110 aa6.99□□□□□ -1.29
CNNM3-202ENST00000377060 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
CNNM3-202ENST00000377060 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
CNNM3-202ENST00000377060 DSTQ03001 7570 aaKnown RBP6.76□□□□□ -1.33
CNNM3-202ENST00000377060 OBSCNQ5VST9 7968 aa6.7□□□□□ -1.34
CNNM3-202ENST00000377060 KRTAP9-6A8MVA2 160 aa6.68□□□□□ -1.34
CNNM3-202ENST00000377060 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
CNNM3-202ENST00000377060 FCGBPQ9Y6R7 5405 aaPredicted RBP6.59□□□□□ -1.36
CNNM3-202ENST00000377060 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
CNNM3-202ENST00000377060 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
CNNM3-202ENST00000377060 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
CNNM3-202ENST00000377060 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
CNNM3-202ENST00000377060 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
CNNM3-202ENST00000377060 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms