RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 A0A1B0GVY2 172 aa7.5□□□□□ -1.21
UBQLN1-202ENST00000376395 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
UBQLN1-202ENST00000376395 HECTD4Q9Y4D8 3996 aa7.5□□□□□ -1.21
UBQLN1-202ENST00000376395 M0R2T5 61 aa7.46□□□□□ -1.22
UBQLN1-202ENST00000376395 VPS13BQ7Z7G8 4022 aa7.45□□□□□ -1.22
UBQLN1-202ENST00000376395 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
UBQLN1-202ENST00000376395 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
UBQLN1-202ENST00000376395 TPRXLQ17RH7 258 aa7.4□□□□□ -1.23
UBQLN1-202ENST00000376395 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
UBQLN1-202ENST00000376395 KRTAP10-4P60372 401 aaPredicted RBP7.34□□□□□ -1.23
UBQLN1-202ENST00000376395 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
UBQLN1-202ENST00000376395 DYNC2H1Q8NCM8 4307 aaKnown RBP7.33□□□□□ -1.24
UBQLN1-202ENST00000376395 DYNC1H1Q14204 4646 aaKnown RBP7.3□□□□□ -1.24
UBQLN1-202ENST00000376395 HYDINQ4G0P3 5121 aa7.3□□□□□ -1.24
UBQLN1-202ENST00000376395 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
UBQLN1-202ENST00000376395 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.25
UBQLN1-202ENST00000376395 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
UBQLN1-202ENST00000376395 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
UBQLN1-202ENST00000376395 PKHD1P08F94 4074 aa7.24□□□□□ -1.25
UBQLN1-202ENST00000376395 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
UBQLN1-202ENST00000376395 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
UBQLN1-202ENST00000376395 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
UBQLN1-202ENST00000376395 SACSQ9NZJ4 4579 aa7.11□□□□□ -1.27
UBQLN1-202ENST00000376395 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
UBQLN1-202ENST00000376395 TNP1P09430 55 aa7.09□□□□□ -1.27
UBQLN1-202ENST00000376395 APOBP04114 4563 aaKnown RBP7.05□□□□□ -1.28
UBQLN1-202ENST00000376395 FAT2Q9NYQ8 4349 aa7.03□□□□□ -1.28
UBQLN1-202ENST00000376395 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
UBQLN1-202ENST00000376395 RYR1P21817 5038 aa6.99□□□□□ -1.29
UBQLN1-202ENST00000376395 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
UBQLN1-202ENST00000376395 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
UBQLN1-202ENST00000376395 PKD1P98161 4303 aa6.93□□□□□ -1.3
UBQLN1-202ENST00000376395 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
UBQLN1-202ENST00000376395 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
UBQLN1-202ENST00000376395 LRP2P98164 4655 aa6.86□□□□□ -1.31
UBQLN1-202ENST00000376395 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.31
UBQLN1-202ENST00000376395 RYR3Q15413 4870 aa6.84□□□□□ -1.32
UBQLN1-202ENST00000376395 KMT2CQ8NEZ4 4911 aaKnown RBP6.82□□□□□ -1.32
UBQLN1-202ENST00000376395 HSPG2P98160 4391 aa6.78□□□□□ -1.32
UBQLN1-202ENST00000376395 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
UBQLN1-202ENST00000376395 RYR2Q92736 4967 aa6.7□□□□□ -1.34
UBQLN1-202ENST00000376395 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
UBQLN1-202ENST00000376395 LPAP08519 4548 aa6.64□□□□□ -1.35
UBQLN1-202ENST00000376395 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
UBQLN1-202ENST00000376395 TNXBP22105 4242 aa6.47□□□□□ -1.37
UBQLN1-202ENST00000376395 EPPK1P58107 5090 aaKnown RBP6.4□□□□□ -1.39
UBQLN1-202ENST00000376395 ABCA13Q86UQ4 5058 aa6.36□□□□□ -1.39
UBQLN1-202ENST00000376395 HERC2O95714 4834 aa6.35□□□□□ -1.39
UBQLN1-202ENST00000376395 MUC2Q02817 5179 aa6.33□□□□□ -1.4
UBQLN1-202ENST00000376395 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
UBQLN1-202ENST00000376395 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
UBQLN1-202ENST00000376395 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
UBQLN1-202ENST00000376395 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
UBQLN1-202ENST00000376395 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
UBQLN1-202ENST00000376395 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
UBQLN1-202ENST00000376395 RNF213Q63HN8 5207 aa6□□□□□ -1.45
UBQLN1-202ENST00000376395 MT1HP80294 61 aa6□□□□□ -1.45
UBQLN1-202ENST00000376395 MT1FP04733 61 aa5.99□□□□□ -1.45
UBQLN1-202ENST00000376395 KRTAP19-2Q3LHN2 52 aa5.99□□□□□ -1.45
UBQLN1-202ENST00000376395 HERC1Q15751 4861 aa5.98□□□□□ -1.45
UBQLN1-202ENST00000376395 MT2AP02795 61 aa5.97□□□□□ -1.45
UBQLN1-202ENST00000376395 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
UBQLN1-202ENST00000376395 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
UBQLN1-202ENST00000376395 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
UBQLN1-202ENST00000376395 FLGP20930 4061 aaPredicted RBP5.87□□□□□ -1.47
UBQLN1-202ENST00000376395 INE1O15225 51 aa5.84□□□□□ -1.47
UBQLN1-202ENST00000376395 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
UBQLN1-202ENST00000376395 BIRC6Q9NR09 4857 aa5.83□□□□□ -1.48
UBQLN1-202ENST00000376395 PCLOQ9Y6V0 5065 aa5.83□□□□□ -1.48
UBQLN1-202ENST00000376395 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
UBQLN1-202ENST00000376395 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
UBQLN1-202ENST00000376395 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
UBQLN1-202ENST00000376395 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
UBQLN1-202ENST00000376395 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
UBQLN1-202ENST00000376395 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
UBQLN1-202ENST00000376395 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
UBQLN1-202ENST00000376395 MT1XP80297 61 aa5.67□□□□□ -1.5
UBQLN1-202ENST00000376395 KRTAP10-5P60370 271 aa5.65□□□□□ -1.51
UBQLN1-202ENST00000376395 MT1BP07438 61 aa5.64□□□□□ -1.51
UBQLN1-202ENST00000376395 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
UBQLN1-202ENST00000376395 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
UBQLN1-202ENST00000376395 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
UBQLN1-202ENST00000376395 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
UBQLN1-202ENST00000376395 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
UBQLN1-202ENST00000376395 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
UBQLN1-202ENST00000376395 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
UBQLN1-202ENST00000376395 USH2AO75445 5202 aa5.42□□□□□ -1.54
UBQLN1-202ENST00000376395 KMT2DO14686 5537 aa5.37□□□□□ -1.55
UBQLN1-202ENST00000376395 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
UBQLN1-202ENST00000376395 LCE2BO14633 110 aa5.32□□□□□ -1.56
UBQLN1-202ENST00000376395 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.57
UBQLN1-202ENST00000376395 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
UBQLN1-202ENST00000376395 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
UBQLN1-202ENST00000376395 MT1GP13640 62 aa5.04□□□□□ -1.6
UBQLN1-202ENST00000376395 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
UBQLN1-202ENST00000376395 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
UBQLN1-202ENST00000376395 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
UBQLN1-202ENST00000376395 MT1LQ93083 61 aa4.97□□□□□ -1.61
UBQLN1-202ENST00000376395 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.61
UBQLN1-202ENST00000376395 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms