RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
ABCA1-202ENST00000374736 HECTD4Q9Y4D8 3996 aa3.22□□□□□ -1.89
ABCA1-202ENST00000374736 ANK2Q01484 3957 aa3.2□□□□□ -1.9
ABCA1-202ENST00000374736 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
ABCA1-202ENST00000374736 SVEP1Q4LDE5 3571 aa3.16□□□□□ -1.9
ABCA1-202ENST00000374736 LORP23490 312 aaPredicted RBP3.15□□□□□ -1.91
ABCA1-202ENST00000374736 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
ABCA1-202ENST00000374736 ZNF469Q96JG9 3925 aaPredicted RBP3.12□□□□□ -1.91
ABCA1-202ENST00000374736 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
ABCA1-202ENST00000374736 KRTAP10-4P60372 401 aaPredicted RBP3.1□□□□□ -1.91
ABCA1-202ENST00000374736 MUC3AQ02505 3323 aa3.09□□□□□ -1.91
ABCA1-202ENST00000374736 DNAH6Q9C0G6 4158 aa3.08□□□□□ -1.92
ABCA1-202ENST00000374736 MT1HL1P0DM35 61 aa3.08□□□□□ -1.92
ABCA1-202ENST00000374736 CUBNO60494 3623 aa3.05□□□□□ -1.92
ABCA1-202ENST00000374736 CSMD2Q7Z408 3487 aa3.04□□□□□ -1.92
ABCA1-202ENST00000374736 CRCT1Q9UGL9 99 aa3.01□□□□□ -1.93
ABCA1-202ENST00000374736 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
ABCA1-202ENST00000374736 HUWE1Q7Z6Z7 4374 aaKnown RBP2.97□□□□□ -1.93
ABCA1-202ENST00000374736 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
ABCA1-202ENST00000374736 LCE2CQ5TA81 110 aa2.95□□□□□ -1.94
ABCA1-202ENST00000374736 KMT2AQ03164 3969 aa2.93□□□□□ -1.94
ABCA1-202ENST00000374736 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
ABCA1-202ENST00000374736 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
ABCA1-202ENST00000374736 DNAH2Q9P225 4427 aa2.9□□□□□ -1.94
ABCA1-202ENST00000374736 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
ABCA1-202ENST00000374736 DNAH1Q9P2D7 4330 aa2.88□□□□□ -1.95
ABCA1-202ENST00000374736 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
ABCA1-202ENST00000374736 KRTAP2-3P0C7H8 128 aa2.85□□□□□ -1.95
ABCA1-202ENST00000374736 KRTAP2-4Q9BYR9 128 aa2.85□□□□□ -1.95
ABCA1-202ENST00000374736 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
ABCA1-202ENST00000374736 PRM1P04553 51 aa2.83□□□□□ -1.96
ABCA1-202ENST00000374736 PRKDCP78527 4128 aaKnown RBP2.83□□□□□ -1.96
ABCA1-202ENST00000374736 SPRR2AP35326 72 aa2.76□□□□□ -1.97
ABCA1-202ENST00000374736 SPRR2BP35325 72 aa2.74□□□□□ -1.97
ABCA1-202ENST00000374736 LCE3BQ5TA77 95 aa2.74□□□□□ -1.97
ABCA1-202ENST00000374736 FRAS1Q86XX4 4008 aa2.73□□□□□ -1.97
ABCA1-202ENST00000374736 KRTAP4-5Q9BYR2 181 aa2.72□□□□□ -1.97
ABCA1-202ENST00000374736 MT1LQ93083 61 aa2.71□□□□□ -1.98
ABCA1-202ENST00000374736 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
ABCA1-202ENST00000374736 LCE2AQ5TA79 106 aaPredicted RBP2.71□□□□□ -1.98
ABCA1-202ENST00000374736 LCE2DQ5TA82 110 aaPredicted RBP2.7□□□□□ -1.98
ABCA1-202ENST00000374736 MT2AP02795 61 aa2.7□□□□□ -1.98
ABCA1-202ENST00000374736 MT1AP04731 61 aa2.68□□□□□ -1.98
ABCA1-202ENST00000374736 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
ABCA1-202ENST00000374736 MT1HP80294 61 aa2.68□□□□□ -1.98
ABCA1-202ENST00000374736 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
ABCA1-202ENST00000374736 ANK3Q12955 4377 aaKnown RBP2.67□□□□□ -1.98
ABCA1-202ENST00000374736 LCE2BO14633 110 aa2.66□□□□□ -1.98
ABCA1-202ENST00000374736 DNAH11Q96DT5 4516 aa2.65□□□□□ -1.98
ABCA1-202ENST00000374736 MT1EP04732 61 aa2.64□□□□□ -1.99
ABCA1-202ENST00000374736 SPRR2FQ96RM1 72 aa2.63□□□□□ -1.99
ABCA1-202ENST00000374736 DYNC2H1Q8NCM8 4307 aaKnown RBP2.62□□□□□ -1.99
ABCA1-202ENST00000374736 MT1FP04733 61 aa2.62□□□□□ -1.99
ABCA1-202ENST00000374736 SPRR2DP22532 72 aa2.61□□□□□ -1.99
ABCA1-202ENST00000374736 MT1XP80297 61 aa2.61□□□□□ -1.99
ABCA1-202ENST00000374736 MT1GP13640 62 aa2.6□□□□□ -1.99
ABCA1-202ENST00000374736 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
ABCA1-202ENST00000374736 PKHD1P08F94 4074 aa2.59□□□□□ -2
ABCA1-202ENST00000374736 KRTAP19-1Q8IUB9 90 aa2.57□□□□□ -2
ABCA1-202ENST00000374736 DNAH8Q96JB1 4490 aa2.56□□□□□ -2
ABCA1-202ENST00000374736 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
ABCA1-202ENST00000374736 HSPG2P98160 4391 aa2.54□□□□□ -2
ABCA1-202ENST00000374736 DYNC1H1Q14204 4646 aaKnown RBP2.52□□□□□ -2.01
ABCA1-202ENST00000374736 LRP1Q07954 4544 aaKnown RBP2.52□□□□□ -2.01
ABCA1-202ENST00000374736 DNAH17Q9UFH2 4485 aa2.5□□□□□ -2.01
ABCA1-202ENST00000374736 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
ABCA1-202ENST00000374736 DNAH5Q8TE73 4624 aa2.5□□□□□ -2.01
ABCA1-202ENST00000374736 FAT2Q9NYQ8 4349 aa2.49□□□□□ -2.01
ABCA1-202ENST00000374736 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
ABCA1-202ENST00000374736 SPRR2EP22531 72 aa2.45□□□□□ -2.02
ABCA1-202ENST00000374736 DNAH9Q9NYC9 4486 aa2.44□□□□□ -2.02
ABCA1-202ENST00000374736 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
ABCA1-202ENST00000374736 PKD1P98161 4303 aa2.42□□□□□ -2.02
ABCA1-202ENST00000374736 TNXBP22105 4242 aa2.41□□□□□ -2.02
ABCA1-202ENST00000374736 MT1BP07438 61 aa2.41□□□□□ -2.02
ABCA1-202ENST00000374736 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
ABCA1-202ENST00000374736 PLECQ15149 4684 aaKnown RBP2.39□□□□□ -2.03
ABCA1-202ENST00000374736 PKHD1L1Q86WI1 4243 aa2.38□□□□□ -2.03
ABCA1-202ENST00000374736 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
ABCA1-202ENST00000374736 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
ABCA1-202ENST00000374736 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
ABCA1-202ENST00000374736 RYR1P21817 5038 aa2.37□□□□□ -2.03
ABCA1-202ENST00000374736 STARD9Q9P2P6 4700 aa2.33□□□□□ -2.04
ABCA1-202ENST00000374736 MT1MQ8N339 61 aa2.33□□□□□ -2.04
ABCA1-202ENST00000374736 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
ABCA1-202ENST00000374736 KRTAP9-8Q9BYQ0 159 aa2.32□□□□□ -2.04
ABCA1-202ENST00000374736 RYR3Q15413 4870 aa2.3□□□□□ -2.04
ABCA1-202ENST00000374736 KRTAP9-3Q9BYQ3 159 aa2.3□□□□□ -2.04
ABCA1-202ENST00000374736 SACSQ9NZJ4 4579 aa2.29□□□□□ -2.04
ABCA1-202ENST00000374736 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
ABCA1-202ENST00000374736 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.04
ABCA1-202ENST00000374736 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
ABCA1-202ENST00000374736 APOBP04114 4563 aaKnown RBP2.25□□□□□ -2.05
ABCA1-202ENST00000374736 LCE1DQ5T752 114 aa2.24□□□□□ -2.05
ABCA1-202ENST00000374736 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
ABCA1-202ENST00000374736 KRTAP9-7A8MTY7 169 aa2.24□□□□□ -2.05
ABCA1-202ENST00000374736 FAT3Q8TDW7 4589 aa2.24□□□□□ -2.05
ABCA1-202ENST00000374736 FAT1Q14517 4588 aa2.23□□□□□ -2.05
ABCA1-202ENST00000374736 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
ABCA1-202ENST00000374736 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms