RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 ALMS1Q8TCU4 4167 aa3.25□□□□□ -1.89
CSMD2-206ENST00000373388 CSMD2Q7Z408 3487 aa3.24□□□□□ -1.89
CSMD2-206ENST00000373388 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
CSMD2-206ENST00000373388 MUC3AQ02505 3323 aa3.22□□□□□ -1.89
CSMD2-206ENST00000373388 RYR1P21817 5038 aa3.21□□□□□ -1.9
CSMD2-206ENST00000373388 DNAH11Q96DT5 4516 aa3.2□□□□□ -1.9
CSMD2-206ENST00000373388 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
CSMD2-206ENST00000373388 KRTAP10-12P60413 245 aa3.18□□□□□ -1.9
CSMD2-206ENST00000373388 KMT2AQ03164 3969 aa3.17□□□□□ -1.9
CSMD2-206ENST00000373388 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
CSMD2-206ENST00000373388 KRTAP3-2Q9BYR7 98 aa3.15□□□□□ -1.9
CSMD2-206ENST00000373388 PRKDCP78527 4128 aaKnown RBP3.15□□□□□ -1.91
CSMD2-206ENST00000373388 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
CSMD2-206ENST00000373388 KRTAP3-3Q9BYR6 98 aa3.06□□□□□ -1.92
CSMD2-206ENST00000373388 ANK3Q12955 4377 aaKnown RBP3.06□□□□□ -1.92
CSMD2-206ENST00000373388 PLECQ15149 4684 aaKnown RBP3.05□□□□□ -1.92
CSMD2-206ENST00000373388 VPS13DQ5THJ4 4388 aa3.03□□□□□ -1.92
CSMD2-206ENST00000373388 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.93
CSMD2-206ENST00000373388 PKHD1P08F94 4074 aa2.98□□□□□ -1.93
CSMD2-206ENST00000373388 DNAH17Q9UFH2 4485 aa2.97□□□□□ -1.93
CSMD2-206ENST00000373388 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.93
CSMD2-206ENST00000373388 DNAH8Q96JB1 4490 aa2.94□□□□□ -1.94
CSMD2-206ENST00000373388 LCE3AQ5TA76 89 aa2.94□□□□□ -1.94
CSMD2-206ENST00000373388 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
CSMD2-206ENST00000373388 PKHD1L1Q86WI1 4243 aa2.91□□□□□ -1.94
CSMD2-206ENST00000373388 DNHD1Q96M86 4753 aa2.91□□□□□ -1.94
CSMD2-206ENST00000373388 DYNC1H1Q14204 4646 aaKnown RBP2.89□□□□□ -1.95
CSMD2-206ENST00000373388 KRTAP4-5Q9BYR2 181 aa2.89□□□□□ -1.95
CSMD2-206ENST00000373388 HYDINQ4G0P3 5121 aa2.89□□□□□ -1.95
CSMD2-206ENST00000373388 DYNC2H1Q8NCM8 4307 aaKnown RBP2.89□□□□□ -1.95
CSMD2-206ENST00000373388 SACSQ9NZJ4 4579 aa2.88□□□□□ -1.95
CSMD2-206ENST00000373388 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
CSMD2-206ENST00000373388 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
CSMD2-206ENST00000373388 PCLOQ9Y6V0 5065 aa2.84□□□□□ -1.95
CSMD2-206ENST00000373388 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.96
CSMD2-206ENST00000373388 APOBP04114 4563 aaKnown RBP2.83□□□□□ -1.96
CSMD2-206ENST00000373388 DNAH9Q9NYC9 4486 aa2.81□□□□□ -1.96
CSMD2-206ENST00000373388 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
CSMD2-206ENST00000373388 MT3P25713 68 aa2.81□□□□□ -1.96
CSMD2-206ENST00000373388 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
CSMD2-206ENST00000373388 PKD1P98161 4303 aa2.79□□□□□ -1.96
CSMD2-206ENST00000373388 KRTAP10-4P60372 401 aaPredicted RBP2.76□□□□□ -1.97
CSMD2-206ENST00000373388 FAT2Q9NYQ8 4349 aa2.73□□□□□ -1.97
CSMD2-206ENST00000373388 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
CSMD2-206ENST00000373388 RYR3Q15413 4870 aa2.71□□□□□ -1.98
CSMD2-206ENST00000373388 KRTAP8-1Q8IUC2 63 aa2.7□□□□□ -1.98
CSMD2-206ENST00000373388 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
CSMD2-206ENST00000373388 RYR2Q92736 4967 aa2.67□□□□□ -1.98
CSMD2-206ENST00000373388 HSPG2P98160 4391 aa2.66□□□□□ -1.98
CSMD2-206ENST00000373388 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.98
CSMD2-206ENST00000373388 TNXBP22105 4242 aa2.65□□□□□ -1.99
CSMD2-206ENST00000373388 MYCBP2O75592 4640 aa2.65□□□□□ -1.99
CSMD2-206ENST00000373388 BIRC6Q9NR09 4857 aa2.63□□□□□ -1.99
CSMD2-206ENST00000373388 EPPK1P58107 5090 aaKnown RBP2.63□□□□□ -1.99
CSMD2-206ENST00000373388 KRTAP4-1Q9BYQ7 146 aa2.63□□□□□ -1.99
CSMD2-206ENST00000373388 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
CSMD2-206ENST00000373388 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
CSMD2-206ENST00000373388 KRTAP10-7P60409 375 aaPredicted RBP2.58□□□□□ -2
CSMD2-206ENST00000373388 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
CSMD2-206ENST00000373388 FAT1Q14517 4588 aa2.54□□□□□ -2
CSMD2-206ENST00000373388 ABCA13Q86UQ4 5058 aa2.53□□□□□ -2
CSMD2-206ENST00000373388 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
CSMD2-206ENST00000373388 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
CSMD2-206ENST00000373388 RNF213Q63HN8 5207 aa2.53□□□□□ -2
CSMD2-206ENST00000373388 MT1HP80294 61 aa2.52□□□□□ -2.01
CSMD2-206ENST00000373388 HERC2O95714 4834 aa2.51□□□□□ -2.01
CSMD2-206ENST00000373388 HMCN2Q8NDA2 5059 aa2.5□□□□□ -2.01
CSMD2-206ENST00000373388 MT2AP02795 61 aa2.5□□□□□ -2.01
CSMD2-206ENST00000373388 MT1FP04733 61 aa2.49□□□□□ -2.01
CSMD2-206ENST00000373388 HERC1Q15751 4861 aa2.48□□□□□ -2.01
CSMD2-206ENST00000373388 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
CSMD2-206ENST00000373388 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
CSMD2-206ENST00000373388 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
CSMD2-206ENST00000373388 LCE3BQ5TA77 95 aa2.42□□□□□ -2.02
CSMD2-206ENST00000373388 LRP2P98164 4655 aa2.42□□□□□ -2.02
CSMD2-206ENST00000373388 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
CSMD2-206ENST00000373388 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
CSMD2-206ENST00000373388 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
CSMD2-206ENST00000373388 KMT2CQ8NEZ4 4911 aaKnown RBP2.37□□□□□ -2.03
CSMD2-206ENST00000373388 SPRR2EP22531 72 aa2.37□□□□□ -2.03
CSMD2-206ENST00000373388 SPRR2BP35325 72 aa2.37□□□□□ -2.03
CSMD2-206ENST00000373388 SPRR2AP35326 72 aa2.37□□□□□ -2.03
CSMD2-206ENST00000373388 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
CSMD2-206ENST00000373388 MT1GP13640 62 aa2.34□□□□□ -2.03
CSMD2-206ENST00000373388 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
CSMD2-206ENST00000373388 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
CSMD2-206ENST00000373388 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
CSMD2-206ENST00000373388 MT1XP80297 61 aa2.31□□□□□ -2.04
CSMD2-206ENST00000373388 KRTAP19-1Q8IUB9 90 aa2.29□□□□□ -2.04
CSMD2-206ENST00000373388 SPRR2DP22532 72 aa2.28□□□□□ -2.04
CSMD2-206ENST00000373388 KMT2DO14686 5537 aa2.27□□□□□ -2.05
CSMD2-206ENST00000373388 PRM1P04553 51 aa2.27□□□□□ -2.05
CSMD2-206ENST00000373388 KRTAP4-8A0A0G2JLE6 195 aa2.27□□□□□ -2.05
CSMD2-206ENST00000373388 KRTAP4-8Q9BYQ9 185 aa2.27□□□□□ -2.05
CSMD2-206ENST00000373388 MT1LQ93083 61 aa2.25□□□□□ -2.05
CSMD2-206ENST00000373388 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
CSMD2-206ENST00000373388 LCE2BO14633 110 aa2.22□□□□□ -2.05
CSMD2-206ENST00000373388 MT1BP07438 61 aa2.22□□□□□ -2.05
CSMD2-206ENST00000373388 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.05
CSMD2-206ENST00000373388 KRTAP4-7Q9BYR0 210 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms