RNA–Protein interactions for RNA: ENST00000373057.7

FOXP4-202, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-202ENST00000373057 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
FOXP4-202ENST00000373057 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
FOXP4-202ENST00000373057 KRTAP13-4Q3LI77 160 aa9.72□□□□□ -0.85
FOXP4-202ENST00000373057 KRTAP10-8P60410 259 aa9.7□□□□□ -0.86
FOXP4-202ENST00000373057 KMT2CQ8NEZ4 4911 aaKnown RBP9.69□□□□□ -0.86
FOXP4-202ENST00000373057 HSPG2P98160 4391 aa9.69□□□□□ -0.86
FOXP4-202ENST00000373057 RPL37P61927 97 aaKnown RBP9.69□□□□□ -0.86
FOXP4-202ENST00000373057 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.86
FOXP4-202ENST00000373057 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
FOXP4-202ENST00000373057 S4R3F8 94 aa9.63□□□□□ -0.87
FOXP4-202ENST00000373057 KRTAP10-6P60371 365 aaPredicted RBP9.61□□□□□ -0.87
FOXP4-202ENST00000373057 LUZP6Q538Z0 58 aa9.59□□□□□ -0.87
FOXP4-202ENST00000373057 FAT3Q8TDW7 4589 aa9.59□□□□□ -0.87
FOXP4-202ENST00000373057 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
FOXP4-202ENST00000373057 A0A1B0GVY2 172 aa9.57□□□□□ -0.88
FOXP4-202ENST00000373057 Q5VSD8 79 aa9.54□□□□□ -0.88
FOXP4-202ENST00000373057 XP32Q5T750 250 aa9.52□□□□□ -0.89
FOXP4-202ENST00000373057 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
FOXP4-202ENST00000373057 RYR2Q92736 4967 aa9.49□□□□□ -0.89
FOXP4-202ENST00000373057 KRTAP3-2Q9BYR7 98 aa9.48□□□□□ -0.89
FOXP4-202ENST00000373057 LPAP08519 4548 aa9.46□□□□□ -0.9
FOXP4-202ENST00000373057 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
FOXP4-202ENST00000373057 KIAA1109Q2LD37 5005 aa9.42□□□□□ -0.9
FOXP4-202ENST00000373057 TNXBP22105 4242 aa9.4□□□□□ -0.91
FOXP4-202ENST00000373057 LRP2P98164 4655 aa9.38□□□□□ -0.91
FOXP4-202ENST00000373057 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
FOXP4-202ENST00000373057 RYR3Q15413 4870 aa9.31□□□□□ -0.92
FOXP4-202ENST00000373057 RYR1P21817 5038 aa9.29□□□□□ -0.92
FOXP4-202ENST00000373057 KRTAP15-1Q3LI76 137 aa9.27□□□□□ -0.93
FOXP4-202ENST00000373057 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
FOXP4-202ENST00000373057 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.93
FOXP4-202ENST00000373057 M0QZ58 72 aa9.2□□□□□ -0.94
FOXP4-202ENST00000373057 R4GN34 69 aa9.13□□□□□ -0.95
FOXP4-202ENST00000373057 ABCA13Q86UQ4 5058 aa9.08□□□□□ -0.96
FOXP4-202ENST00000373057 MT1HL1P0DM35 61 aa9.07□□□□□ -0.96
FOXP4-202ENST00000373057 EPPK1P58107 5090 aaKnown RBP8.99□□□□□ -0.97
FOXP4-202ENST00000373057 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
FOXP4-202ENST00000373057 KRTAP4-5Q9BYR2 181 aa8.88□□□□□ -0.99
FOXP4-202ENST00000373057 SEC61BP60468 96 aaKnown RBP8.88□□□□□ -0.99
FOXP4-202ENST00000373057 MUC2Q02817 5179 aa8.83□□□□□ -1
FOXP4-202ENST00000373057 CAMK2N1Q7Z7J9 78 aa8.82□□□□□ -1
FOXP4-202ENST00000373057 J3QL48 77 aa8.74□□□□□ -1.01
FOXP4-202ENST00000373057 PLAC4Q8WY50 150 aa8.71□□□□□ -1.01
FOXP4-202ENST00000373057 KRTAP4-1Q9BYQ7 146 aa8.68□□□□□ -1.02
FOXP4-202ENST00000373057 HERC2O95714 4834 aa8.55□□□□□ -1.04
FOXP4-202ENST00000373057 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
FOXP4-202ENST00000373057 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
FOXP4-202ENST00000373057 HERC1Q15751 4861 aa8.31□□□□□ -1.08
FOXP4-202ENST00000373057 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
FOXP4-202ENST00000373057 TNP1P09430 55 aa8.25□□□□□ -1.09
FOXP4-202ENST00000373057 M0R2T5 61 aa8.22□□□□□ -1.09
FOXP4-202ENST00000373057 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
FOXP4-202ENST00000373057 KRTAP19-2Q3LHN2 52 aa8.2□□□□□ -1.1
FOXP4-202ENST00000373057 RNF213Q63HN8 5207 aa8.17□□□□□ -1.1
FOXP4-202ENST00000373057 FLGP20930 4061 aaPredicted RBP8.13□□□□□ -1.11
FOXP4-202ENST00000373057 BIRC6Q9NR09 4857 aa8□□□□□ -1.13
FOXP4-202ENST00000373057 PRO2289Q9P1D8 64 aa7.94□□□□□ -1.14
FOXP4-202ENST00000373057 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
FOXP4-202ENST00000373057 HMCN2Q8NDA2 5059 aa7.89□□□□□ -1.15
FOXP4-202ENST00000373057 KRTAP10-10P60014 251 aa7.88□□□□□ -1.15
FOXP4-202ENST00000373057 LCE3AQ5TA76 89 aa7.84□□□□□ -1.15
FOXP4-202ENST00000373057 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
FOXP4-202ENST00000373057 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
FOXP4-202ENST00000373057 MT1FP04733 61 aa7.64□□□□□ -1.19
FOXP4-202ENST00000373057 SPRR2GQ9BYE4 73 aa7.64□□□□□ -1.19
FOXP4-202ENST00000373057 MT1HP80294 61 aa7.6□□□□□ -1.19
FOXP4-202ENST00000373057 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
FOXP4-202ENST00000373057 MT2AP02795 61 aa7.57□□□□□ -1.2
FOXP4-202ENST00000373057 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
FOXP4-202ENST00000373057 INE1O15225 51 aa7.5□□□□□ -1.21
FOXP4-202ENST00000373057 USH2AO75445 5202 aa7.44□□□□□ -1.22
FOXP4-202ENST00000373057 KRTAP12-3P60328 96 aa7.4□□□□□ -1.23
FOXP4-202ENST00000373057 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
FOXP4-202ENST00000373057 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
FOXP4-202ENST00000373057 KMT2DO14686 5537 aa7.38□□□□□ -1.23
FOXP4-202ENST00000373057 KRTAP10-5P60370 271 aa7.34□□□□□ -1.24
FOXP4-202ENST00000373057 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.24
FOXP4-202ENST00000373057 MT1XP80297 61 aa7.33□□□□□ -1.24
FOXP4-202ENST00000373057 MT1BP07438 61 aa7.31□□□□□ -1.24
FOXP4-202ENST00000373057 KRTAP8-1Q8IUC2 63 aa7.3□□□□□ -1.24
FOXP4-202ENST00000373057 KRTAP19-8Q3LI54 63 aa7.19□□□□□ -1.26
FOXP4-202ENST00000373057 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
FOXP4-202ENST00000373057 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
FOXP4-202ENST00000373057 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
FOXP4-202ENST00000373057 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
FOXP4-202ENST00000373057 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
FOXP4-202ENST00000373057 LCE2BO14633 110 aa6.89□□□□□ -1.31
FOXP4-202ENST00000373057 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
FOXP4-202ENST00000373057 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
FOXP4-202ENST00000373057 KRTAP9-6A8MVA2 160 aa6.74□□□□□ -1.33
FOXP4-202ENST00000373057 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.35
FOXP4-202ENST00000373057 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
FOXP4-202ENST00000373057 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
FOXP4-202ENST00000373057 SSPOA2VEC9 5147 aa6.46□□□□□ -1.37
FOXP4-202ENST00000373057 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
FOXP4-202ENST00000373057 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
FOXP4-202ENST00000373057 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
FOXP4-202ENST00000373057 LOC100996750A0A140TA64 210 aa6.38□□□□□ -1.39
FOXP4-202ENST00000373057 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
FOXP4-202ENST00000373057 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms