RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
RAB40A-202ENST00000372633 FAT3Q8TDW7 4589 aa7.03□□□□□ -1.28
RAB40A-202ENST00000372633 TNXBP22105 4242 aa6.99□□□□□ -1.29
RAB40A-202ENST00000372633 P0C880 135 aa6.98□□□□□ -1.29
RAB40A-202ENST00000372633 HSPG2P98160 4391 aa6.97□□□□□ -1.29
RAB40A-202ENST00000372633 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
RAB40A-202ENST00000372633 TPRXLQ17RH7 258 aa6.96□□□□□ -1.3
RAB40A-202ENST00000372633 A0A0D9SG42 100 aa6.95□□□□□ -1.3
RAB40A-202ENST00000372633 S4R3F8 94 aa6.94□□□□□ -1.3
RAB40A-202ENST00000372633 DMBT1Q9UGM3 2413 aaPredicted RBP6.93□□□□□ -1.3
RAB40A-202ENST00000372633 KRTAP10-8P60410 259 aa6.93□□□□□ -1.3
RAB40A-202ENST00000372633 XP32Q5T750 250 aa6.88□□□□□ -1.31
RAB40A-202ENST00000372633 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
RAB40A-202ENST00000372633 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
RAB40A-202ENST00000372633 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
RAB40A-202ENST00000372633 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
RAB40A-202ENST00000372633 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
RAB40A-202ENST00000372633 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
RAB40A-202ENST00000372633 RYR2Q92736 4967 aa6.76□□□□□ -1.33
RAB40A-202ENST00000372633 M0QZ58 72 aa6.71□□□□□ -1.34
RAB40A-202ENST00000372633 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
RAB40A-202ENST00000372633 Q5VSD8 79 aa6.68□□□□□ -1.34
RAB40A-202ENST00000372633 LPAP08519 4548 aa6.64□□□□□ -1.35
RAB40A-202ENST00000372633 KMT2CQ8NEZ4 4911 aaKnown RBP6.62□□□□□ -1.35
RAB40A-202ENST00000372633 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
RAB40A-202ENST00000372633 MT1HL1P0DM35 61 aa6.61□□□□□ -1.35
RAB40A-202ENST00000372633 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
RAB40A-202ENST00000372633 LRP2P98164 4655 aa6.56□□□□□ -1.36
RAB40A-202ENST00000372633 RYR1P21817 5038 aa6.55□□□□□ -1.36
RAB40A-202ENST00000372633 R4GN34 69 aa6.44□□□□□ -1.38
RAB40A-202ENST00000372633 RYR3Q15413 4870 aa6.39□□□□□ -1.39
RAB40A-202ENST00000372633 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
RAB40A-202ENST00000372633 J3QL48 77 aa6.35□□□□□ -1.39
RAB40A-202ENST00000372633 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
RAB40A-202ENST00000372633 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
RAB40A-202ENST00000372633 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
RAB40A-202ENST00000372633 ABCA13Q86UQ4 5058 aa6.26□□□□□ -1.41
RAB40A-202ENST00000372633 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
RAB40A-202ENST00000372633 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
RAB40A-202ENST00000372633 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
RAB40A-202ENST00000372633 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
RAB40A-202ENST00000372633 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
RAB40A-202ENST00000372633 KRTAP4-5Q9BYR2 181 aa6.1□□□□□ -1.43
RAB40A-202ENST00000372633 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
RAB40A-202ENST00000372633 LUZP6Q538Z0 58 aa6.07□□□□□ -1.44
RAB40A-202ENST00000372633 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
RAB40A-202ENST00000372633 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
RAB40A-202ENST00000372633 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
RAB40A-202ENST00000372633 TNP1P09430 55 aa5.96□□□□□ -1.45
RAB40A-202ENST00000372633 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
RAB40A-202ENST00000372633 HERC1Q15751 4861 aa5.92□□□□□ -1.46
RAB40A-202ENST00000372633 MUC2Q02817 5179 aa5.85□□□□□ -1.47
RAB40A-202ENST00000372633 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.48
RAB40A-202ENST00000372633 HERC2O95714 4834 aa5.81□□□□□ -1.48
RAB40A-202ENST00000372633 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
RAB40A-202ENST00000372633 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
RAB40A-202ENST00000372633 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
RAB40A-202ENST00000372633 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
RAB40A-202ENST00000372633 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
RAB40A-202ENST00000372633 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
RAB40A-202ENST00000372633 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
RAB40A-202ENST00000372633 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
RAB40A-202ENST00000372633 MT1HP80294 61 aa5.49□□□□□ -1.53
RAB40A-202ENST00000372633 MT1FP04733 61 aa5.48□□□□□ -1.53
RAB40A-202ENST00000372633 MT2AP02795 61 aa5.47□□□□□ -1.53
RAB40A-202ENST00000372633 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
RAB40A-202ENST00000372633 M0R2T5 61 aa5.45□□□□□ -1.54
RAB40A-202ENST00000372633 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
RAB40A-202ENST00000372633 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
RAB40A-202ENST00000372633 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
RAB40A-202ENST00000372633 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
RAB40A-202ENST00000372633 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.55
RAB40A-202ENST00000372633 MT1XP80297 61 aa5.39□□□□□ -1.55
RAB40A-202ENST00000372633 LCE2DQ5TA82 110 aaPredicted RBP5.39□□□□□ -1.55
RAB40A-202ENST00000372633 INE1O15225 51 aa5.38□□□□□ -1.55
RAB40A-202ENST00000372633 MT1BP07438 61 aa5.37□□□□□ -1.55
RAB40A-202ENST00000372633 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
RAB40A-202ENST00000372633 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
RAB40A-202ENST00000372633 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
RAB40A-202ENST00000372633 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
RAB40A-202ENST00000372633 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
RAB40A-202ENST00000372633 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
RAB40A-202ENST00000372633 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
RAB40A-202ENST00000372633 LCE2BO14633 110 aa5.01□□□□□ -1.61
RAB40A-202ENST00000372633 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
RAB40A-202ENST00000372633 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
RAB40A-202ENST00000372633 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
RAB40A-202ENST00000372633 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
RAB40A-202ENST00000372633 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
RAB40A-202ENST00000372633 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
RAB40A-202ENST00000372633 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
RAB40A-202ENST00000372633 KMT2DO14686 5537 aa4.83□□□□□ -1.64
RAB40A-202ENST00000372633 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
RAB40A-202ENST00000372633 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
RAB40A-202ENST00000372633 USH2AO75445 5202 aa4.75□□□□□ -1.65
RAB40A-202ENST00000372633 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
RAB40A-202ENST00000372633 MT1LQ93083 61 aa4.67□□□□□ -1.66
RAB40A-202ENST00000372633 MT1EP04732 61 aa4.64□□□□□ -1.67
RAB40A-202ENST00000372633 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
RAB40A-202ENST00000372633 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 243.8 ms