RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.5
PTCH2-201ENST00000372192 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
PTCH2-201ENST00000372192 DNAH2Q9P225 4427 aa5.61□□□□□ -1.51
PTCH2-201ENST00000372192 FRAS1Q86XX4 4008 aa5.6□□□□□ -1.51
PTCH2-201ENST00000372192 PLAC4Q8WY50 150 aa5.59□□□□□ -1.51
PTCH2-201ENST00000372192 KMT2AQ03164 3969 aa5.59□□□□□ -1.52
PTCH2-201ENST00000372192 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
PTCH2-201ENST00000372192 DYNC2H1Q8NCM8 4307 aaKnown RBP5.56□□□□□ -1.52
PTCH2-201ENST00000372192 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
PTCH2-201ENST00000372192 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
PTCH2-201ENST00000372192 PRKDCP78527 4128 aaKnown RBP5.52□□□□□ -1.53
PTCH2-201ENST00000372192 HECTD4Q9Y4D8 3996 aa5.52□□□□□ -1.53
PTCH2-201ENST00000372192 DNAH5Q8TE73 4624 aa5.52□□□□□ -1.53
PTCH2-201ENST00000372192 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
PTCH2-201ENST00000372192 TNP1P09430 55 aa5.45□□□□□ -1.54
PTCH2-201ENST00000372192 VPS13BQ7Z7G8 4022 aa5.44□□□□□ -1.54
PTCH2-201ENST00000372192 DNAH6Q9C0G6 4158 aa5.43□□□□□ -1.54
PTCH2-201ENST00000372192 MT1HL1P0DM35 61 aa5.4□□□□□ -1.54
PTCH2-201ENST00000372192 FAT1Q14517 4588 aa5.38□□□□□ -1.55
PTCH2-201ENST00000372192 SACSQ9NZJ4 4579 aa5.36□□□□□ -1.55
PTCH2-201ENST00000372192 DYNC1H1Q14204 4646 aaKnown RBP5.35□□□□□ -1.55
PTCH2-201ENST00000372192 DNHD1Q96M86 4753 aa5.3□□□□□ -1.56
PTCH2-201ENST00000372192 FAT2Q9NYQ8 4349 aa5.25□□□□□ -1.57
PTCH2-201ENST00000372192 HYDINQ4G0P3 5121 aa5.18□□□□□ -1.58
PTCH2-201ENST00000372192 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
PTCH2-201ENST00000372192 MYCBP2O75592 4640 aa5.15□□□□□ -1.59
PTCH2-201ENST00000372192 PKD1P98161 4303 aa5.12□□□□□ -1.59
PTCH2-201ENST00000372192 PKHD1P08F94 4074 aa5.11□□□□□ -1.59
PTCH2-201ENST00000372192 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
PTCH2-201ENST00000372192 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.6
PTCH2-201ENST00000372192 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
PTCH2-201ENST00000372192 FAT3Q8TDW7 4589 aa5.06□□□□□ -1.6
PTCH2-201ENST00000372192 KRTAP10-10P60014 251 aa5.03□□□□□ -1.6
PTCH2-201ENST00000372192 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
PTCH2-201ENST00000372192 KRTAP4-1Q9BYQ7 146 aa4.97□□□□□ -1.61
PTCH2-201ENST00000372192 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
PTCH2-201ENST00000372192 RYR1P21817 5038 aa4.96□□□□□ -1.62
PTCH2-201ENST00000372192 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
PTCH2-201ENST00000372192 KIAA1109Q2LD37 5005 aa4.93□□□□□ -1.62
PTCH2-201ENST00000372192 LRP2P98164 4655 aa4.88□□□□□ -1.63
PTCH2-201ENST00000372192 RYR2Q92736 4967 aa4.88□□□□□ -1.63
PTCH2-201ENST00000372192 HSPG2P98160 4391 aa4.88□□□□□ -1.63
PTCH2-201ENST00000372192 RYR3Q15413 4870 aa4.85□□□□□ -1.63
PTCH2-201ENST00000372192 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
PTCH2-201ENST00000372192 TNXBP22105 4242 aa4.82□□□□□ -1.64
PTCH2-201ENST00000372192 KMT2CQ8NEZ4 4911 aaKnown RBP4.79□□□□□ -1.64
PTCH2-201ENST00000372192 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
PTCH2-201ENST00000372192 INE1O15225 51 aa4.72□□□□□ -1.65
PTCH2-201ENST00000372192 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
PTCH2-201ENST00000372192 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
PTCH2-201ENST00000372192 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
PTCH2-201ENST00000372192 LPAP08519 4548 aa4.67□□□□□ -1.66
PTCH2-201ENST00000372192 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
PTCH2-201ENST00000372192 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
PTCH2-201ENST00000372192 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
PTCH2-201ENST00000372192 MT1HP80294 61 aa4.55□□□□□ -1.68
PTCH2-201ENST00000372192 MT2AP02795 61 aa4.55□□□□□ -1.68
PTCH2-201ENST00000372192 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
PTCH2-201ENST00000372192 MT1FP04733 61 aa4.52□□□□□ -1.69
PTCH2-201ENST00000372192 HERC2O95714 4834 aa4.49□□□□□ -1.69
PTCH2-201ENST00000372192 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
PTCH2-201ENST00000372192 LCE2CQ5TA81 110 aa4.42□□□□□ -1.7
PTCH2-201ENST00000372192 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
PTCH2-201ENST00000372192 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
PTCH2-201ENST00000372192 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
PTCH2-201ENST00000372192 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.71
PTCH2-201ENST00000372192 EPPK1P58107 5090 aaKnown RBP4.39□□□□□ -1.71
PTCH2-201ENST00000372192 MT1XP80297 61 aa4.34□□□□□ -1.71
PTCH2-201ENST00000372192 KRTAP10-5P60370 271 aa4.34□□□□□ -1.72
PTCH2-201ENST00000372192 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
PTCH2-201ENST00000372192 MT1BP07438 61 aa4.32□□□□□ -1.72
PTCH2-201ENST00000372192 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
PTCH2-201ENST00000372192 HERC1Q15751 4861 aa4.28□□□□□ -1.72
PTCH2-201ENST00000372192 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
PTCH2-201ENST00000372192 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
PTCH2-201ENST00000372192 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
PTCH2-201ENST00000372192 MUC2Q02817 5179 aa4.23□□□□□ -1.73
PTCH2-201ENST00000372192 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
PTCH2-201ENST00000372192 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
PTCH2-201ENST00000372192 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
PTCH2-201ENST00000372192 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
PTCH2-201ENST00000372192 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
PTCH2-201ENST00000372192 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
PTCH2-201ENST00000372192 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
PTCH2-201ENST00000372192 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
PTCH2-201ENST00000372192 UBR4Q5T4S7 5183 aa4.01□□□□□ -1.77
PTCH2-201ENST00000372192 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
PTCH2-201ENST00000372192 LCE2BO14633 110 aa3.96□□□□□ -1.78
PTCH2-201ENST00000372192 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
PTCH2-201ENST00000372192 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
PTCH2-201ENST00000372192 MT1LQ93083 61 aa3.84□□□□□ -1.79
PTCH2-201ENST00000372192 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
PTCH2-201ENST00000372192 MT1EP04732 61 aa3.81□□□□□ -1.8
PTCH2-201ENST00000372192 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
PTCH2-201ENST00000372192 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
PTCH2-201ENST00000372192 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
PTCH2-201ENST00000372192 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
PTCH2-201ENST00000372192 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
PTCH2-201ENST00000372192 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.81
PTCH2-201ENST00000372192 MT1GP13640 62 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms