RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 LRP1Q07954 4544 aaKnown RBP9.97□□□□□ -0.81
GTF3C5-202ENST00000372097 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
GTF3C5-202ENST00000372097 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
GTF3C5-202ENST00000372097 KRTAP13-4Q3LI77 160 aa9.92□□□□□ -0.82
GTF3C5-202ENST00000372097 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
GTF3C5-202ENST00000372097 HSPG2P98160 4391 aa9.86□□□□□ -0.83
GTF3C5-202ENST00000372097 TNXBP22105 4242 aa9.86□□□□□ -0.83
GTF3C5-202ENST00000372097 FAT3Q8TDW7 4589 aa9.85□□□□□ -0.83
GTF3C5-202ENST00000372097 Q5VSD8 79 aa9.85□□□□□ -0.83
GTF3C5-202ENST00000372097 RYR3Q15413 4870 aa9.84□□□□□ -0.83
GTF3C5-202ENST00000372097 P0C880 135 aa9.84□□□□□ -0.83
GTF3C5-202ENST00000372097 A0A0D9SG42 100 aa9.83□□□□□ -0.84
GTF3C5-202ENST00000372097 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
GTF3C5-202ENST00000372097 KRTAP10-8P60410 259 aa9.8□□□□□ -0.84
GTF3C5-202ENST00000372097 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
GTF3C5-202ENST00000372097 S4R3F8 94 aa9.74□□□□□ -0.85
GTF3C5-202ENST00000372097 KRTAP17-1Q9BYP8 105 aa9.73□□□□□ -0.85
GTF3C5-202ENST00000372097 RYR1P21817 5038 aa9.72□□□□□ -0.85
GTF3C5-202ENST00000372097 MYCBP2O75592 4640 aa9.71□□□□□ -0.85
GTF3C5-202ENST00000372097 KIAA1109Q2LD37 5005 aa9.67□□□□□ -0.86
GTF3C5-202ENST00000372097 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
GTF3C5-202ENST00000372097 SPINT4Q6UDR6 99 aa9.65□□□□□ -0.86
GTF3C5-202ENST00000372097 XP32Q5T750 250 aa9.63□□□□□ -0.87
GTF3C5-202ENST00000372097 KRTAP12-2P59991 146 aa9.62□□□□□ -0.87
GTF3C5-202ENST00000372097 MT1HL1P0DM35 61 aa9.54□□□□□ -0.88
GTF3C5-202ENST00000372097 KRTAP12-1P59990 96 aa9.53□□□□□ -0.88
GTF3C5-202ENST00000372097 KRTAP15-1Q3LI76 137 aa9.52□□□□□ -0.89
GTF3C5-202ENST00000372097 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
GTF3C5-202ENST00000372097 LPAP08519 4548 aa9.39□□□□□ -0.91
GTF3C5-202ENST00000372097 NDUFAF8A1L188 74 aa9.37□□□□□ -0.91
GTF3C5-202ENST00000372097 M0QZ58 72 aa9.37□□□□□ -0.91
GTF3C5-202ENST00000372097 LRP2P98164 4655 aa9.36□□□□□ -0.91
GTF3C5-202ENST00000372097 KRTAP4-5Q9BYR2 181 aa9.29□□□□□ -0.92
GTF3C5-202ENST00000372097 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
GTF3C5-202ENST00000372097 R4GN34 69 aa9.06□□□□□ -0.96
GTF3C5-202ENST00000372097 J3QL48 77 aa8.96□□□□□ -0.98
GTF3C5-202ENST00000372097 HERC2O95714 4834 aa8.95□□□□□ -0.98
GTF3C5-202ENST00000372097 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
GTF3C5-202ENST00000372097 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
GTF3C5-202ENST00000372097 PLAC4Q8WY50 150 aa8.92□□□□□ -0.98
GTF3C5-202ENST00000372097 MUC17Q685J3 4493 aa8.91□□□□□ -0.98
GTF3C5-202ENST00000372097 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
GTF3C5-202ENST00000372097 MUC2Q02817 5179 aa8.72□□□□□ -1.01
GTF3C5-202ENST00000372097 PP632Q6XCG6 107 aa8.71□□□□□ -1.02
GTF3C5-202ENST00000372097 BIRC6Q9NR09 4857 aa8.68□□□□□ -1.02
GTF3C5-202ENST00000372097 KRTAP19-2Q3LHN2 52 aa8.64□□□□□ -1.03
GTF3C5-202ENST00000372097 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
GTF3C5-202ENST00000372097 HERC1Q15751 4861 aa8.57□□□□□ -1.04
GTF3C5-202ENST00000372097 LUZP6Q538Z0 58 aa8.56□□□□□ -1.04
GTF3C5-202ENST00000372097 PCLOQ9Y6V0 5065 aa8.52□□□□□ -1.05
GTF3C5-202ENST00000372097 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
GTF3C5-202ENST00000372097 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
GTF3C5-202ENST00000372097 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
GTF3C5-202ENST00000372097 TNP1P09430 55 aa8.37□□□□□ -1.07
GTF3C5-202ENST00000372097 KRTAP23-1A1A580 65 aa8.35□□□□□ -1.07
GTF3C5-202ENST00000372097 SPRR5A0A1B0GTR4 108 aa8.3□□□□□ -1.08
GTF3C5-202ENST00000372097 FAT4Q6V0I7 4981 aa8.29□□□□□ -1.08
GTF3C5-202ENST00000372097 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
GTF3C5-202ENST00000372097 RNF213Q63HN8 5207 aa8.15□□□□□ -1.11
GTF3C5-202ENST00000372097 UBR4Q5T4S7 5183 aa8.12□□□□□ -1.11
GTF3C5-202ENST00000372097 M0R2T5 61 aa8.05□□□□□ -1.12
GTF3C5-202ENST00000372097 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
GTF3C5-202ENST00000372097 MT1HP80294 61 aa7.99□□□□□ -1.13
GTF3C5-202ENST00000372097 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
GTF3C5-202ENST00000372097 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
GTF3C5-202ENST00000372097 MT1FP04733 61 aa7.83□□□□□ -1.16
GTF3C5-202ENST00000372097 KRTAP10-10P60014 251 aa7.83□□□□□ -1.16
GTF3C5-202ENST00000372097 MT2AP02795 61 aa7.83□□□□□ -1.16
GTF3C5-202ENST00000372097 KRTAP9-8Q9BYQ0 159 aa7.79□□□□□ -1.16
GTF3C5-202ENST00000372097 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
GTF3C5-202ENST00000372097 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
GTF3C5-202ENST00000372097 KRTAP19-8Q3LI54 63 aa7.6□□□□□ -1.19
GTF3C5-202ENST00000372097 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
GTF3C5-202ENST00000372097 MT1XP80297 61 aa7.53□□□□□ -1.2
GTF3C5-202ENST00000372097 INE1O15225 51 aa7.52□□□□□ -1.2
GTF3C5-202ENST00000372097 MT1BP07438 61 aa7.52□□□□□ -1.2
GTF3C5-202ENST00000372097 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
GTF3C5-202ENST00000372097 KRTAP10-12P60413 245 aa7.46□□□□□ -1.22
GTF3C5-202ENST00000372097 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
GTF3C5-202ENST00000372097 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
GTF3C5-202ENST00000372097 LCE2BO14633 110 aa7.21□□□□□ -1.25
GTF3C5-202ENST00000372097 USH2AO75445 5202 aa7.21□□□□□ -1.26
GTF3C5-202ENST00000372097 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
GTF3C5-202ENST00000372097 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
GTF3C5-202ENST00000372097 KRTAP19-5Q3LI72 72 aa7.09□□□□□ -1.27
GTF3C5-202ENST00000372097 KMT2DO14686 5537 aa7□□□□□ -1.29
GTF3C5-202ENST00000372097 KRTAP9-6A8MVA2 160 aa6.91□□□□□ -1.3
GTF3C5-202ENST00000372097 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
GTF3C5-202ENST00000372097 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
GTF3C5-202ENST00000372097 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
GTF3C5-202ENST00000372097 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
GTF3C5-202ENST00000372097 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
GTF3C5-202ENST00000372097 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
GTF3C5-202ENST00000372097 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
GTF3C5-202ENST00000372097 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
GTF3C5-202ENST00000372097 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.35
GTF3C5-202ENST00000372097 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
GTF3C5-202ENST00000372097 MT1LQ93083 61 aa6.54□□□□□ -1.36
GTF3C5-202ENST00000372097 MT1EP04732 61 aa6.48□□□□□ -1.37
GTF3C5-202ENST00000372097 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms