RNA–Protein interactions for RNA: ENST00000371454.6

LRP8-204, Transcript of LDL receptor related protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRP8, Length 3,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-204ENST00000371454 KRTAP13-4Q3LI77 160 aa10.07□□□□□ -0.8
LRP8-204ENST00000371454 LPAP08519 4548 aa10.05□□□□□ -0.8
LRP8-204ENST00000371454 C20orf166-AS1Q96NR2 134 aa10.04□□□□□ -0.8
LRP8-204ENST00000371454 K7ERS5 55 aa10.03□□□□□ -0.8
LRP8-204ENST00000371454 ROMO1P60602 79 aa10.03□□□□□ -0.8
LRP8-204ENST00000371454 KRTAP10-8P60410 259 aa10□□□□□ -0.81
LRP8-204ENST00000371454 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
LRP8-204ENST00000371454 SPINT4Q6UDR6 99 aa9.95□□□□□ -0.82
LRP8-204ENST00000371454 P0C880 135 aa9.94□□□□□ -0.82
LRP8-204ENST00000371454 KIAA1109Q2LD37 5005 aa9.91□□□□□ -0.82
LRP8-204ENST00000371454 EPPK1P58107 5090 aaKnown RBP9.9□□□□□ -0.82
LRP8-204ENST00000371454 KRTAP10-6P60371 365 aaPredicted RBP9.87□□□□□ -0.83
LRP8-204ENST00000371454 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
LRP8-204ENST00000371454 TPRXLQ17RH7 258 aa9.86□□□□□ -0.83
LRP8-204ENST00000371454 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
LRP8-204ENST00000371454 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
LRP8-204ENST00000371454 LRP2P98164 4655 aa9.83□□□□□ -0.84
LRP8-204ENST00000371454 KRTAP10-4P60372 401 aaPredicted RBP9.81□□□□□ -0.84
LRP8-204ENST00000371454 RPS29P62273 56 aaKnown RBP9.76□□□□□ -0.85
LRP8-204ENST00000371454 S4R3F8 94 aa9.76□□□□□ -0.85
LRP8-204ENST00000371454 RYR1P21817 5038 aa9.75□□□□□ -0.85
LRP8-204ENST00000371454 KRTAP12-2P59991 146 aa9.74□□□□□ -0.85
LRP8-204ENST00000371454 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
LRP8-204ENST00000371454 XP32Q5T750 250 aa9.67□□□□□ -0.86
LRP8-204ENST00000371454 Q5VSD8 79 aa9.66□□□□□ -0.86
LRP8-204ENST00000371454 TNXBP22105 4242 aa9.66□□□□□ -0.86
LRP8-204ENST00000371454 NDUFAF8A1L188 74 aa9.66□□□□□ -0.86
LRP8-204ENST00000371454 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
LRP8-204ENST00000371454 ABCA13Q86UQ4 5058 aa9.54□□□□□ -0.88
LRP8-204ENST00000371454 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
LRP8-204ENST00000371454 MUC2Q02817 5179 aa9.46□□□□□ -0.9
LRP8-204ENST00000371454 KRTAP4-5Q9BYR2 181 aa9.45□□□□□ -0.9
LRP8-204ENST00000371454 M0QZ58 72 aa9.37□□□□□ -0.91
LRP8-204ENST00000371454 KRTAP15-1Q3LI76 137 aa9.28□□□□□ -0.92
LRP8-204ENST00000371454 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
LRP8-204ENST00000371454 HERC2O95714 4834 aa9.27□□□□□ -0.93
LRP8-204ENST00000371454 R4GN34 69 aa9.26□□□□□ -0.93
LRP8-204ENST00000371454 MT1HL1P0DM35 61 aa9.21□□□□□ -0.93
LRP8-204ENST00000371454 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
LRP8-204ENST00000371454 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
LRP8-204ENST00000371454 J3QL48 77 aa9.05□□□□□ -0.96
LRP8-204ENST00000371454 HERC1Q15751 4861 aa9.05□□□□□ -0.96
LRP8-204ENST00000371454 CAMK2N1Q7Z7J9 78 aa8.94□□□□□ -0.98
LRP8-204ENST00000371454 KRTAP4-1Q9BYQ7 146 aa8.94□□□□□ -0.98
LRP8-204ENST00000371454 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
LRP8-204ENST00000371454 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
LRP8-204ENST00000371454 MUC17Q685J3 4493 aa8.79□□□□□ -1
LRP8-204ENST00000371454 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
LRP8-204ENST00000371454 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
LRP8-204ENST00000371454 UBR4Q5T4S7 5183 aa8.6□□□□□ -1.03
LRP8-204ENST00000371454 LUZP6Q538Z0 58 aa8.6□□□□□ -1.03
LRP8-204ENST00000371454 HMCN2Q8NDA2 5059 aa8.54□□□□□ -1.04
LRP8-204ENST00000371454 KRTAP19-2Q3LHN2 52 aa8.37□□□□□ -1.07
LRP8-204ENST00000371454 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
LRP8-204ENST00000371454 TNP1P09430 55 aa8.33□□□□□ -1.08
LRP8-204ENST00000371454 FLGP20930 4061 aaPredicted RBP8.33□□□□□ -1.08
LRP8-204ENST00000371454 M0R2T5 61 aa8.3□□□□□ -1.08
LRP8-204ENST00000371454 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
LRP8-204ENST00000371454 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
LRP8-204ENST00000371454 USH2AO75445 5202 aa7.98□□□□□ -1.13
LRP8-204ENST00000371454 KRTAP10-10P60014 251 aa7.98□□□□□ -1.13
LRP8-204ENST00000371454 KMT2DO14686 5537 aa7.97□□□□□ -1.13
LRP8-204ENST00000371454 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
LRP8-204ENST00000371454 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
LRP8-204ENST00000371454 MT1FP04733 61 aa7.81□□□□□ -1.16
LRP8-204ENST00000371454 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
LRP8-204ENST00000371454 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
LRP8-204ENST00000371454 MT1HP80294 61 aa7.72□□□□□ -1.17
LRP8-204ENST00000371454 MT2AP02795 61 aa7.7□□□□□ -1.18
LRP8-204ENST00000371454 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
LRP8-204ENST00000371454 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
LRP8-204ENST00000371454 KRTAP12-3P60328 96 aa7.53□□□□□ -1.2
LRP8-204ENST00000371454 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
LRP8-204ENST00000371454 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
LRP8-204ENST00000371454 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
LRP8-204ENST00000371454 MT1XP80297 61 aa7.5□□□□□ -1.21
LRP8-204ENST00000371454 KRTAP10-12P60413 245 aa7.49□□□□□ -1.21
LRP8-204ENST00000371454 MT1BP07438 61 aa7.47□□□□□ -1.21
LRP8-204ENST00000371454 KRTAP8-1Q8IUC2 63 aa7.41□□□□□ -1.22
LRP8-204ENST00000371454 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
LRP8-204ENST00000371454 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
LRP8-204ENST00000371454 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
LRP8-204ENST00000371454 KRTAP19-5Q3LI72 72 aa7.24□□□□□ -1.25
LRP8-204ENST00000371454 KRTAP19-8Q3LI54 63 aa7.23□□□□□ -1.25
LRP8-204ENST00000371454 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.25
LRP8-204ENST00000371454 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
LRP8-204ENST00000371454 DSTQ03001 7570 aaKnown RBP7.15□□□□□ -1.27
LRP8-204ENST00000371454 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
LRP8-204ENST00000371454 LCE2BO14633 110 aa7.04□□□□□ -1.28
LRP8-204ENST00000371454 KRTAP9-6A8MVA2 160 aa7.04□□□□□ -1.28
LRP8-204ENST00000371454 INE1O15225 51 aa7.01□□□□□ -1.29
LRP8-204ENST00000371454 LCE3CQ5T5A8 94 aa7□□□□□ -1.29
LRP8-204ENST00000371454 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
LRP8-204ENST00000371454 OBSCNQ5VST9 7968 aa6.94□□□□□ -1.3
LRP8-204ENST00000371454 MUC12Q9UKN1 5478 aa6.88□□□□□ -1.31
LRP8-204ENST00000371454 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
LRP8-204ENST00000371454 SYNE1Q8NF91 8797 aaKnown RBP6.87□□□□□ -1.31
LRP8-204ENST00000371454 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
LRP8-204ENST00000371454 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
LRP8-204ENST00000371454 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms