RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 A8MUU9 505 aa6.97□□□□□ -1.29
GPC3-201ENST00000370818 C20orf166-AS1Q96NR2 134 aa6.95□□□□□ -1.3
GPC3-201ENST00000370818 EPPK1P58107 5090 aaKnown RBP6.93□□□□□ -1.3
GPC3-201ENST00000370818 H0YAA0 97 aa6.91□□□□□ -1.3
GPC3-201ENST00000370818 MYCBP2O75592 4640 aa6.89□□□□□ -1.31
GPC3-201ENST00000370818 P0C880 135 aa6.85□□□□□ -1.31
GPC3-201ENST00000370818 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
GPC3-201ENST00000370818 MT1HL1P0DM35 61 aa6.85□□□□□ -1.31
GPC3-201ENST00000370818 CRIPTQ9P021 101 aa6.79□□□□□ -1.32
GPC3-201ENST00000370818 A0A1B0GU33 70 aa6.78□□□□□ -1.32
GPC3-201ENST00000370818 H1FX-AS1Q4G0G2 97 aa6.73□□□□□ -1.33
GPC3-201ENST00000370818 XP32Q5T750 250 aa6.73□□□□□ -1.33
GPC3-201ENST00000370818 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
GPC3-201ENST00000370818 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
GPC3-201ENST00000370818 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.33
GPC3-201ENST00000370818 K7ERS5 55 aa6.64□□□□□ -1.35
GPC3-201ENST00000370818 COX6B2Q6YFQ2 88 aa6.63□□□□□ -1.35
GPC3-201ENST00000370818 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
GPC3-201ENST00000370818 LPAP08519 4548 aa6.59□□□□□ -1.35
GPC3-201ENST00000370818 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
GPC3-201ENST00000370818 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.36
GPC3-201ENST00000370818 LRP2P98164 4655 aa6.58□□□□□ -1.36
GPC3-201ENST00000370818 NDUFAF8A1L188 74 aa6.54□□□□□ -1.36
GPC3-201ENST00000370818 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
GPC3-201ENST00000370818 HERC2O95714 4834 aa6.52□□□□□ -1.37
GPC3-201ENST00000370818 BIRC6Q9NR09 4857 aa6.47□□□□□ -1.37
GPC3-201ENST00000370818 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.38
GPC3-201ENST00000370818 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
GPC3-201ENST00000370818 J3QL48 77 aa6.44□□□□□ -1.38
GPC3-201ENST00000370818 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
GPC3-201ENST00000370818 KRTAP10-6P60371 365 aaPredicted RBP6.41□□□□□ -1.38
GPC3-201ENST00000370818 A0A0D9SG42 100 aa6.39□□□□□ -1.39
GPC3-201ENST00000370818 S4R3F8 94 aa6.39□□□□□ -1.39
GPC3-201ENST00000370818 MUC17Q685J3 4493 aa6.33□□□□□ -1.4
GPC3-201ENST00000370818 SEC61BP60468 96 aaKnown RBP6.32□□□□□ -1.4
GPC3-201ENST00000370818 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
GPC3-201ENST00000370818 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
GPC3-201ENST00000370818 KRTAP4-1Q9BYQ7 146 aa6.29□□□□□ -1.4
GPC3-201ENST00000370818 PCLOQ9Y6V0 5065 aa6.25□□□□□ -1.41
GPC3-201ENST00000370818 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
GPC3-201ENST00000370818 HERC1Q15751 4861 aa6.21□□□□□ -1.41
GPC3-201ENST00000370818 MUC2Q02817 5179 aa6.17□□□□□ -1.42
GPC3-201ENST00000370818 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
GPC3-201ENST00000370818 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
GPC3-201ENST00000370818 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
GPC3-201ENST00000370818 LUZP6Q538Z0 58 aa6.09□□□□□ -1.44
GPC3-201ENST00000370818 M0QZ58 72 aa6.01□□□□□ -1.45
GPC3-201ENST00000370818 FLGP20930 4061 aaPredicted RBP5.99□□□□□ -1.45
GPC3-201ENST00000370818 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
GPC3-201ENST00000370818 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
GPC3-201ENST00000370818 R4GN34 69 aa5.91□□□□□ -1.46
GPC3-201ENST00000370818 UBR4Q5T4S7 5183 aa5.9□□□□□ -1.47
GPC3-201ENST00000370818 LCE2CQ5TA81 110 aa5.9□□□□□ -1.47
GPC3-201ENST00000370818 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
GPC3-201ENST00000370818 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
GPC3-201ENST00000370818 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
GPC3-201ENST00000370818 MT1HP80294 61 aa5.74□□□□□ -1.49
GPC3-201ENST00000370818 M0R2T5 61 aa5.67□□□□□ -1.5
GPC3-201ENST00000370818 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
GPC3-201ENST00000370818 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.52
GPC3-201ENST00000370818 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
GPC3-201ENST00000370818 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
GPC3-201ENST00000370818 MT2AP02795 61 aa5.58□□□□□ -1.52
GPC3-201ENST00000370818 MT1FP04733 61 aa5.57□□□□□ -1.52
GPC3-201ENST00000370818 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
GPC3-201ENST00000370818 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
GPC3-201ENST00000370818 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
GPC3-201ENST00000370818 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
GPC3-201ENST00000370818 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
GPC3-201ENST00000370818 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
GPC3-201ENST00000370818 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
GPC3-201ENST00000370818 MT1BP07438 61 aa5.33□□□□□ -1.56
GPC3-201ENST00000370818 TNP1P09430 55 aa5.33□□□□□ -1.56
GPC3-201ENST00000370818 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
GPC3-201ENST00000370818 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
GPC3-201ENST00000370818 MT1XP80297 61 aa5.22□□□□□ -1.57
GPC3-201ENST00000370818 INE1O15225 51 aa5.2□□□□□ -1.58
GPC3-201ENST00000370818 LCE2BO14633 110 aa5.18□□□□□ -1.58
GPC3-201ENST00000370818 USH2AO75445 5202 aa5.12□□□□□ -1.59
GPC3-201ENST00000370818 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
GPC3-201ENST00000370818 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
GPC3-201ENST00000370818 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
GPC3-201ENST00000370818 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
GPC3-201ENST00000370818 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
GPC3-201ENST00000370818 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
GPC3-201ENST00000370818 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
GPC3-201ENST00000370818 KMT2DO14686 5537 aa4.87□□□□□ -1.63
GPC3-201ENST00000370818 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
GPC3-201ENST00000370818 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
GPC3-201ENST00000370818 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
GPC3-201ENST00000370818 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
GPC3-201ENST00000370818 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
GPC3-201ENST00000370818 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
GPC3-201ENST00000370818 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
GPC3-201ENST00000370818 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
GPC3-201ENST00000370818 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
GPC3-201ENST00000370818 MT1EP04732 61 aa4.55□□□□□ -1.68
GPC3-201ENST00000370818 MT1LQ93083 61 aa4.5□□□□□ -1.69
GPC3-201ENST00000370818 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
GPC3-201ENST00000370818 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms