RNA–Protein interactions for RNA: ENST00000370328.3

GABRE-201, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRE, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-201ENST00000370328 LPAP08519 4548 aa4.56□□□□□ -1.68
GABRE-201ENST00000370328 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
GABRE-201ENST00000370328 KRTAP13-2Q52LG2 175 aa4.55□□□□□ -1.68
GABRE-201ENST00000370328 A0A087WSZ3 146 aa4.54□□□□□ -1.68
GABRE-201ENST00000370328 UQCR11O14957 56 aa4.54□□□□□ -1.68
GABRE-201ENST00000370328 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
GABRE-201ENST00000370328 IGFL1Q6UW32 110 aa4.53□□□□□ -1.68
GABRE-201ENST00000370328 TNXBP22105 4242 aa4.53□□□□□ -1.68
GABRE-201ENST00000370328 HMCN2Q8NDA2 5059 aa4.52□□□□□ -1.69
GABRE-201ENST00000370328 LINC00304Q8N9R0 145 aa4.51□□□□□ -1.69
GABRE-201ENST00000370328 LINC00472Q9H8W2 130 aa4.5□□□□□ -1.69
GABRE-201ENST00000370328 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
GABRE-201ENST00000370328 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
GABRE-201ENST00000370328 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
GABRE-201ENST00000370328 TP53AIP1Q9HCN2 124 aa4.45□□□□□ -1.7
GABRE-201ENST00000370328 Q5W150 140 aa4.43□□□□□ -1.7
GABRE-201ENST00000370328 C9orf92A6NGG3 77 aa4.42□□□□□ -1.7
GABRE-201ENST00000370328 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
GABRE-201ENST00000370328 Q96NJ1 140 aa4.39□□□□□ -1.71
GABRE-201ENST00000370328 A0A1B0GVX0 72 aa4.38□□□□□ -1.71
GABRE-201ENST00000370328 SPINK1P00995 79 aa4.38□□□□□ -1.71
GABRE-201ENST00000370328 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
GABRE-201ENST00000370328 SPRR1BP22528 89 aa4.37□□□□□ -1.71
GABRE-201ENST00000370328 ACYP2P14621 99 aa4.35□□□□□ -1.71
GABRE-201ENST00000370328 MRPL34Q9BQ48 92 aaKnown RBP4.33□□□□□ -1.72
GABRE-201ENST00000370328 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
GABRE-201ENST00000370328 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
GABRE-201ENST00000370328 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
GABRE-201ENST00000370328 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
GABRE-201ENST00000370328 XP32Q5T750 250 aa4.22□□□□□ -1.73
GABRE-201ENST00000370328 FSIP2Q5CZC0 6907 aa4.21□□□□□ -1.74
GABRE-201ENST00000370328 H0YAA0 97 aa4.21□□□□□ -1.74
GABRE-201ENST00000370328 RPS29P62273 56 aaKnown RBP4.18□□□□□ -1.74
GABRE-201ENST00000370328 IGKV2-30P06310 120 aa4.15□□□□□ -1.74
GABRE-201ENST00000370328 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
GABRE-201ENST00000370328 IGKV2D-30A0A075B6S6 120 aa4.12□□□□□ -1.75
GABRE-201ENST00000370328 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
GABRE-201ENST00000370328 RPL37P61927 97 aaKnown RBP4.09□□□□□ -1.76
GABRE-201ENST00000370328 A0A1B0GU33 70 aa4.08□□□□□ -1.76
GABRE-201ENST00000370328 A0A0D9SG42 100 aa4.05□□□□□ -1.76
GABRE-201ENST00000370328 M0R2T5 61 aa4.04□□□□□ -1.76
GABRE-201ENST00000370328 R4GN34 69 aa4.02□□□□□ -1.77
GABRE-201ENST00000370328 MUC17Q685J3 4493 aa4□□□□□ -1.77
GABRE-201ENST00000370328 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
GABRE-201ENST00000370328 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
GABRE-201ENST00000370328 USH2AO75445 5202 aa3.93□□□□□ -1.78
GABRE-201ENST00000370328 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
GABRE-201ENST00000370328 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
GABRE-201ENST00000370328 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
GABRE-201ENST00000370328 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
GABRE-201ENST00000370328 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
GABRE-201ENST00000370328 MT1HP80294 61 aa3.87□□□□□ -1.79
GABRE-201ENST00000370328 FLGP20930 4061 aaPredicted RBP3.87□□□□□ -1.79
GABRE-201ENST00000370328 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
GABRE-201ENST00000370328 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
GABRE-201ENST00000370328 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
GABRE-201ENST00000370328 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
GABRE-201ENST00000370328 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
GABRE-201ENST00000370328 S4R3F8 94 aa3.73□□□□□ -1.81
GABRE-201ENST00000370328 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.81
GABRE-201ENST00000370328 KRTAP12-2P59991 146 aa3.71□□□□□ -1.81
GABRE-201ENST00000370328 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
GABRE-201ENST00000370328 KRTAP3-2Q9BYR7 98 aa3.67□□□□□ -1.82
GABRE-201ENST00000370328 MT1FP04733 61 aa3.67□□□□□ -1.82
GABRE-201ENST00000370328 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
GABRE-201ENST00000370328 MT2AP02795 61 aa3.66□□□□□ -1.82
GABRE-201ENST00000370328 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
GABRE-201ENST00000370328 KRTAP3-3Q9BYR6 98 aa3.64□□□□□ -1.83
GABRE-201ENST00000370328 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
GABRE-201ENST00000370328 INE1O15225 51 aa3.59□□□□□ -1.83
GABRE-201ENST00000370328 LCE2BO14633 110 aa3.55□□□□□ -1.84
GABRE-201ENST00000370328 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
GABRE-201ENST00000370328 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
GABRE-201ENST00000370328 M0QZ58 72 aa3.52□□□□□ -1.85
GABRE-201ENST00000370328 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
GABRE-201ENST00000370328 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
GABRE-201ENST00000370328 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
GABRE-201ENST00000370328 KMT2DO14686 5537 aa3.49□□□□□ -1.85
GABRE-201ENST00000370328 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
GABRE-201ENST00000370328 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
GABRE-201ENST00000370328 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
GABRE-201ENST00000370328 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
GABRE-201ENST00000370328 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
GABRE-201ENST00000370328 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
GABRE-201ENST00000370328 MT1BP07438 61 aa3.35□□□□□ -1.87
GABRE-201ENST00000370328 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
GABRE-201ENST00000370328 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
GABRE-201ENST00000370328 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
GABRE-201ENST00000370328 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
GABRE-201ENST00000370328 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
GABRE-201ENST00000370328 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
GABRE-201ENST00000370328 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
GABRE-201ENST00000370328 MT1XP80297 61 aa3.2□□□□□ -1.9
GABRE-201ENST00000370328 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
GABRE-201ENST00000370328 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
GABRE-201ENST00000370328 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
GABRE-201ENST00000370328 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
GABRE-201ENST00000370328 TNP1P09430 55 aa3.17□□□□□ -1.9
GABRE-201ENST00000370328 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
GABRE-201ENST00000370328 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms