RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 DNAH11Q96DT5 4516 aa5.96□□□□□ -1.46
RAP1A-202ENST00000369709 DNAH2Q9P225 4427 aa5.92□□□□□ -1.46
RAP1A-202ENST00000369709 M0R2T5 61 aa5.9□□□□□ -1.46
RAP1A-202ENST00000369709 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
RAP1A-202ENST00000369709 STARD9Q9P2P6 4700 aa5.86□□□□□ -1.47
RAP1A-202ENST00000369709 VPS13DQ5THJ4 4388 aa5.85□□□□□ -1.47
RAP1A-202ENST00000369709 KMT2AQ03164 3969 aa5.85□□□□□ -1.47
RAP1A-202ENST00000369709 HECTD4Q9Y4D8 3996 aa5.84□□□□□ -1.47
RAP1A-202ENST00000369709 A0A1B0GVY2 172 aa5.83□□□□□ -1.48
RAP1A-202ENST00000369709 LRP1BQ9NZR2 4599 aa5.81□□□□□ -1.48
RAP1A-202ENST00000369709 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
RAP1A-202ENST00000369709 VPS13BQ7Z7G8 4022 aa5.74□□□□□ -1.49
RAP1A-202ENST00000369709 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
RAP1A-202ENST00000369709 DYNC2H1Q8NCM8 4307 aaKnown RBP5.64□□□□□ -1.51
RAP1A-202ENST00000369709 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
RAP1A-202ENST00000369709 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
RAP1A-202ENST00000369709 FAT1Q14517 4588 aa5.6□□□□□ -1.51
RAP1A-202ENST00000369709 SACSQ9NZJ4 4579 aa5.57□□□□□ -1.52
RAP1A-202ENST00000369709 PRKDCP78527 4128 aaKnown RBP5.56□□□□□ -1.52
RAP1A-202ENST00000369709 APOBP04114 4563 aaKnown RBP5.5□□□□□ -1.53
RAP1A-202ENST00000369709 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
RAP1A-202ENST00000369709 MYCBP2O75592 4640 aa5.48□□□□□ -1.53
RAP1A-202ENST00000369709 DYNC1H1Q14204 4646 aaKnown RBP5.47□□□□□ -1.53
RAP1A-202ENST00000369709 MT1HL1P0DM35 61 aa5.42□□□□□ -1.54
RAP1A-202ENST00000369709 INE1O15225 51 aa5.41□□□□□ -1.54
RAP1A-202ENST00000369709 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
RAP1A-202ENST00000369709 FAT2Q9NYQ8 4349 aa5.34□□□□□ -1.55
RAP1A-202ENST00000369709 HYDINQ4G0P3 5121 aa5.33□□□□□ -1.56
RAP1A-202ENST00000369709 FAT3Q8TDW7 4589 aa5.29□□□□□ -1.56
RAP1A-202ENST00000369709 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
RAP1A-202ENST00000369709 LRP1Q07954 4544 aaKnown RBP5.28□□□□□ -1.56
RAP1A-202ENST00000369709 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
RAP1A-202ENST00000369709 DNHD1Q96M86 4753 aa5.26□□□□□ -1.57
RAP1A-202ENST00000369709 PKD1P98161 4303 aa5.24□□□□□ -1.57
RAP1A-202ENST00000369709 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
RAP1A-202ENST00000369709 HSPG2P98160 4391 aa5.19□□□□□ -1.58
RAP1A-202ENST00000369709 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
RAP1A-202ENST00000369709 PKHD1L1Q86WI1 4243 aa5.15□□□□□ -1.58
RAP1A-202ENST00000369709 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
RAP1A-202ENST00000369709 KRTAP21-3Q3LHN1 58 aa5.11□□□□□ -1.59
RAP1A-202ENST00000369709 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
RAP1A-202ENST00000369709 LRP2P98164 4655 aa5.08□□□□□ -1.6
RAP1A-202ENST00000369709 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
RAP1A-202ENST00000369709 RYR1P21817 5038 aa5.06□□□□□ -1.6
RAP1A-202ENST00000369709 KMT2CQ8NEZ4 4911 aaKnown RBP5.02□□□□□ -1.61
RAP1A-202ENST00000369709 TNXBP22105 4242 aa5□□□□□ -1.61
RAP1A-202ENST00000369709 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
RAP1A-202ENST00000369709 LPAP08519 4548 aa4.99□□□□□ -1.61
RAP1A-202ENST00000369709 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
RAP1A-202ENST00000369709 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
RAP1A-202ENST00000369709 RYR3Q15413 4870 aa4.83□□□□□ -1.64
RAP1A-202ENST00000369709 RYR2Q92736 4967 aa4.8□□□□□ -1.64
RAP1A-202ENST00000369709 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
RAP1A-202ENST00000369709 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
RAP1A-202ENST00000369709 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
RAP1A-202ENST00000369709 KRTAP19-1Q8IUB9 90 aa4.69□□□□□ -1.66
RAP1A-202ENST00000369709 MT1FP04733 61 aa4.67□□□□□ -1.66
RAP1A-202ENST00000369709 MT2AP02795 61 aa4.66□□□□□ -1.66
RAP1A-202ENST00000369709 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
RAP1A-202ENST00000369709 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
RAP1A-202ENST00000369709 MT1HP80294 61 aa4.63□□□□□ -1.67
RAP1A-202ENST00000369709 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
RAP1A-202ENST00000369709 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
RAP1A-202ENST00000369709 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
RAP1A-202ENST00000369709 ABCA13Q86UQ4 5058 aa4.54□□□□□ -1.68
RAP1A-202ENST00000369709 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
RAP1A-202ENST00000369709 MT1XP80297 61 aa4.53□□□□□ -1.68
RAP1A-202ENST00000369709 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
RAP1A-202ENST00000369709 EPPK1P58107 5090 aaKnown RBP4.47□□□□□ -1.69
RAP1A-202ENST00000369709 MUC2Q02817 5179 aa4.45□□□□□ -1.7
RAP1A-202ENST00000369709 HERC1Q15751 4861 aa4.45□□□□□ -1.7
RAP1A-202ENST00000369709 HERC2O95714 4834 aa4.44□□□□□ -1.7
RAP1A-202ENST00000369709 MT1BP07438 61 aa4.42□□□□□ -1.7
RAP1A-202ENST00000369709 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
RAP1A-202ENST00000369709 LCE2CQ5TA81 110 aa4.38□□□□□ -1.71
RAP1A-202ENST00000369709 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
RAP1A-202ENST00000369709 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
RAP1A-202ENST00000369709 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
RAP1A-202ENST00000369709 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
RAP1A-202ENST00000369709 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
RAP1A-202ENST00000369709 PCLOQ9Y6V0 5065 aa4.28□□□□□ -1.72
RAP1A-202ENST00000369709 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
RAP1A-202ENST00000369709 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
RAP1A-202ENST00000369709 RNF213Q63HN8 5207 aa4.25□□□□□ -1.73
RAP1A-202ENST00000369709 HMCN2Q8NDA2 5059 aa4.24□□□□□ -1.73
RAP1A-202ENST00000369709 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
RAP1A-202ENST00000369709 BIRC6Q9NR09 4857 aa4.19□□□□□ -1.74
RAP1A-202ENST00000369709 MT1GP13640 62 aa4.16□□□□□ -1.74
RAP1A-202ENST00000369709 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
RAP1A-202ENST00000369709 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
RAP1A-202ENST00000369709 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
RAP1A-202ENST00000369709 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
RAP1A-202ENST00000369709 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
RAP1A-202ENST00000369709 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
RAP1A-202ENST00000369709 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
RAP1A-202ENST00000369709 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
RAP1A-202ENST00000369709 MT1LQ93083 61 aa4.02□□□□□ -1.77
RAP1A-202ENST00000369709 KMT2DO14686 5537 aa4□□□□□ -1.77
RAP1A-202ENST00000369709 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
RAP1A-202ENST00000369709 LCE2BO14633 110 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms