RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 H3BS24 57 aa6.79□□□□□ -1.32
CHD1L-202ENST00000369258 RYR2Q92736 4967 aa6.79□□□□□ -1.32
CHD1L-202ENST00000369258 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
CHD1L-202ENST00000369258 LRP2P98164 4655 aa6.78□□□□□ -1.32
CHD1L-202ENST00000369258 RYR1P21817 5038 aa6.76□□□□□ -1.33
CHD1L-202ENST00000369258 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
CHD1L-202ENST00000369258 RYR3Q15413 4870 aa6.73□□□□□ -1.33
CHD1L-202ENST00000369258 KRTAP10-8P60410 259 aa6.72□□□□□ -1.33
CHD1L-202ENST00000369258 KIAA1109Q2LD37 5005 aa6.72□□□□□ -1.33
CHD1L-202ENST00000369258 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
CHD1L-202ENST00000369258 ROMO1P60602 79 aa6.71□□□□□ -1.34
CHD1L-202ENST00000369258 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.35
CHD1L-202ENST00000369258 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
CHD1L-202ENST00000369258 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
CHD1L-202ENST00000369258 C10orf95Q9H7T3 257 aa6.63□□□□□ -1.35
CHD1L-202ENST00000369258 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
CHD1L-202ENST00000369258 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
CHD1L-202ENST00000369258 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
CHD1L-202ENST00000369258 P0C880 135 aa6.61□□□□□ -1.35
CHD1L-202ENST00000369258 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
CHD1L-202ENST00000369258 S4R3F8 94 aa6.56□□□□□ -1.36
CHD1L-202ENST00000369258 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
CHD1L-202ENST00000369258 MUC2Q02817 5179 aa6.53□□□□□ -1.36
CHD1L-202ENST00000369258 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
CHD1L-202ENST00000369258 XP32Q5T750 250 aa6.51□□□□□ -1.37
CHD1L-202ENST00000369258 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
CHD1L-202ENST00000369258 Q5VSD8 79 aa6.5□□□□□ -1.37
CHD1L-202ENST00000369258 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
CHD1L-202ENST00000369258 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
CHD1L-202ENST00000369258 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
CHD1L-202ENST00000369258 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
CHD1L-202ENST00000369258 M0QZ58 72 aa6.27□□□□□ -1.41
CHD1L-202ENST00000369258 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
CHD1L-202ENST00000369258 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
CHD1L-202ENST00000369258 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
CHD1L-202ENST00000369258 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
CHD1L-202ENST00000369258 MUC17Q685J3 4493 aa6.18□□□□□ -1.42
CHD1L-202ENST00000369258 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
CHD1L-202ENST00000369258 R4GN34 69 aa6.12□□□□□ -1.43
CHD1L-202ENST00000369258 HERC2O95714 4834 aa6.1□□□□□ -1.43
CHD1L-202ENST00000369258 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
CHD1L-202ENST00000369258 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
CHD1L-202ENST00000369258 HERC1Q15751 4861 aa6.07□□□□□ -1.44
CHD1L-202ENST00000369258 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
CHD1L-202ENST00000369258 PLAC4Q8WY50 150 aa5.96□□□□□ -1.46
CHD1L-202ENST00000369258 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
CHD1L-202ENST00000369258 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
CHD1L-202ENST00000369258 J3QL48 77 aa5.83□□□□□ -1.48
CHD1L-202ENST00000369258 FLGP20930 4061 aaPredicted RBP5.82□□□□□ -1.48
CHD1L-202ENST00000369258 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
CHD1L-202ENST00000369258 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
CHD1L-202ENST00000369258 HMCN2Q8NDA2 5059 aa5.78□□□□□ -1.48
CHD1L-202ENST00000369258 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
CHD1L-202ENST00000369258 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
CHD1L-202ENST00000369258 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
CHD1L-202ENST00000369258 TNP1P09430 55 aa5.64□□□□□ -1.51
CHD1L-202ENST00000369258 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
CHD1L-202ENST00000369258 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
CHD1L-202ENST00000369258 M0R2T5 61 aa5.49□□□□□ -1.53
CHD1L-202ENST00000369258 USH2AO75445 5202 aa5.47□□□□□ -1.53
CHD1L-202ENST00000369258 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
CHD1L-202ENST00000369258 KMT2DO14686 5537 aa5.44□□□□□ -1.54
CHD1L-202ENST00000369258 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
CHD1L-202ENST00000369258 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
CHD1L-202ENST00000369258 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
CHD1L-202ENST00000369258 SPRR2GQ9BYE4 73 aa5.34□□□□□ -1.55
CHD1L-202ENST00000369258 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
CHD1L-202ENST00000369258 MT1FP04733 61 aa5.31□□□□□ -1.56
CHD1L-202ENST00000369258 MT1HP80294 61 aa5.28□□□□□ -1.56
CHD1L-202ENST00000369258 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
CHD1L-202ENST00000369258 MT2AP02795 61 aa5.23□□□□□ -1.57
CHD1L-202ENST00000369258 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
CHD1L-202ENST00000369258 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
CHD1L-202ENST00000369258 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
CHD1L-202ENST00000369258 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
CHD1L-202ENST00000369258 MT1XP80297 61 aa5.09□□□□□ -1.59
CHD1L-202ENST00000369258 MT1BP07438 61 aa5.08□□□□□ -1.6
CHD1L-202ENST00000369258 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
CHD1L-202ENST00000369258 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
CHD1L-202ENST00000369258 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
CHD1L-202ENST00000369258 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
CHD1L-202ENST00000369258 INE1O15225 51 aa4.98□□□□□ -1.61
CHD1L-202ENST00000369258 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
CHD1L-202ENST00000369258 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
CHD1L-202ENST00000369258 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
CHD1L-202ENST00000369258 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
CHD1L-202ENST00000369258 KRTAP19-5Q3LI72 72 aa4.85□□□□□ -1.63
CHD1L-202ENST00000369258 LCE2BO14633 110 aa4.83□□□□□ -1.64
CHD1L-202ENST00000369258 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
CHD1L-202ENST00000369258 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
CHD1L-202ENST00000369258 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
CHD1L-202ENST00000369258 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
CHD1L-202ENST00000369258 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
CHD1L-202ENST00000369258 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
CHD1L-202ENST00000369258 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
CHD1L-202ENST00000369258 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
CHD1L-202ENST00000369258 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
CHD1L-202ENST00000369258 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
CHD1L-202ENST00000369258 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
CHD1L-202ENST00000369258 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms