RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
SIM1-202ENST00000369208 HUWE1Q7Z6Z7 4374 aaKnown RBP4.12□□□□□ -1.75
SIM1-202ENST00000369208 LORP23490 312 aaPredicted RBP4.11□□□□□ -1.75
SIM1-202ENST00000369208 DNAH3Q8TD57 4116 aa4.09□□□□□ -1.75
SIM1-202ENST00000369208 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
SIM1-202ENST00000369208 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
SIM1-202ENST00000369208 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
SIM1-202ENST00000369208 ANK3Q12955 4377 aaKnown RBP4.03□□□□□ -1.76
SIM1-202ENST00000369208 CSMD3Q7Z407 3707 aa4.01□□□□□ -1.77
SIM1-202ENST00000369208 BSNQ9UPA5 3926 aa4□□□□□ -1.77
SIM1-202ENST00000369208 DNAH1Q9P2D7 4330 aa3.99□□□□□ -1.77
SIM1-202ENST00000369208 MT1HP80294 61 aa3.97□□□□□ -1.77
SIM1-202ENST00000369208 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
SIM1-202ENST00000369208 DNAH6Q9C0G6 4158 aa3.93□□□□□ -1.78
SIM1-202ENST00000369208 MT3P25713 68 aa3.92□□□□□ -1.78
SIM1-202ENST00000369208 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
SIM1-202ENST00000369208 MT2AP02795 61 aa3.87□□□□□ -1.79
SIM1-202ENST00000369208 LYSTQ99698 3801 aa3.87□□□□□ -1.79
SIM1-202ENST00000369208 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
SIM1-202ENST00000369208 HECTD4Q9Y4D8 3996 aa3.84□□□□□ -1.79
SIM1-202ENST00000369208 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
SIM1-202ENST00000369208 DNAH7Q8WXX0 4024 aa3.78□□□□□ -1.8
SIM1-202ENST00000369208 SPRR2EP22531 72 aa3.77□□□□□ -1.81
SIM1-202ENST00000369208 SPRR2BP35325 72 aa3.77□□□□□ -1.81
SIM1-202ENST00000369208 SPRR2AP35326 72 aa3.77□□□□□ -1.81
SIM1-202ENST00000369208 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
SIM1-202ENST00000369208 ZNF469Q96JG9 3925 aaPredicted RBP3.75□□□□□ -1.81
SIM1-202ENST00000369208 MT1FP04733 61 aa3.73□□□□□ -1.81
SIM1-202ENST00000369208 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
SIM1-202ENST00000369208 ANK2Q01484 3957 aa3.73□□□□□ -1.81
SIM1-202ENST00000369208 SPRR2DP22532 72 aa3.69□□□□□ -1.82
SIM1-202ENST00000369208 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
SIM1-202ENST00000369208 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
SIM1-202ENST00000369208 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
SIM1-202ENST00000369208 LCE2BO14633 110 aa3.65□□□□□ -1.82
SIM1-202ENST00000369208 DNAH9Q9NYC9 4486 aa3.65□□□□□ -1.83
SIM1-202ENST00000369208 VPS13BQ7Z7G8 4022 aa3.64□□□□□ -1.83
SIM1-202ENST00000369208 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
SIM1-202ENST00000369208 DNAH11Q96DT5 4516 aa3.62□□□□□ -1.83
SIM1-202ENST00000369208 DNAH5Q8TE73 4624 aa3.62□□□□□ -1.83
SIM1-202ENST00000369208 DNAH8Q96JB1 4490 aa3.62□□□□□ -1.83
SIM1-202ENST00000369208 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
SIM1-202ENST00000369208 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.83
SIM1-202ENST00000369208 PRKDCP78527 4128 aaKnown RBP3.56□□□□□ -1.84
SIM1-202ENST00000369208 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
SIM1-202ENST00000369208 PLECQ15149 4684 aaKnown RBP3.55□□□□□ -1.84
SIM1-202ENST00000369208 MT1GP13640 62 aa3.5□□□□□ -1.85
SIM1-202ENST00000369208 DNAH17Q9UFH2 4485 aa3.5□□□□□ -1.85
SIM1-202ENST00000369208 DYNC2H1Q8NCM8 4307 aaKnown RBP3.47□□□□□ -1.85
SIM1-202ENST00000369208 LCE3BQ5TA77 95 aa3.46□□□□□ -1.86
SIM1-202ENST00000369208 LRP1Q07954 4544 aaKnown RBP3.46□□□□□ -1.86
SIM1-202ENST00000369208 DYNC1H1Q14204 4646 aaKnown RBP3.44□□□□□ -1.86
SIM1-202ENST00000369208 VPS13DQ5THJ4 4388 aa3.44□□□□□ -1.86
SIM1-202ENST00000369208 LCE2CQ5TA81 110 aa3.43□□□□□ -1.86
SIM1-202ENST00000369208 KRTAP19-1Q8IUB9 90 aa3.42□□□□□ -1.86
SIM1-202ENST00000369208 MT1XP80297 61 aa3.4□□□□□ -1.87
SIM1-202ENST00000369208 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SIM1-202ENST00000369208 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
SIM1-202ENST00000369208 LCE2DQ5TA82 110 aaPredicted RBP3.37□□□□□ -1.87
SIM1-202ENST00000369208 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
SIM1-202ENST00000369208 FAT1Q14517 4588 aa3.35□□□□□ -1.87
SIM1-202ENST00000369208 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
SIM1-202ENST00000369208 MT1BP07438 61 aa3.33□□□□□ -1.88
SIM1-202ENST00000369208 SACSQ9NZJ4 4579 aa3.32□□□□□ -1.88
SIM1-202ENST00000369208 PKHD1L1Q86WI1 4243 aa3.31□□□□□ -1.88
SIM1-202ENST00000369208 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
SIM1-202ENST00000369208 KRTAP9-3Q9BYQ3 159 aa3.31□□□□□ -1.88
SIM1-202ENST00000369208 HSPG2P98160 4391 aa3.3□□□□□ -1.88
SIM1-202ENST00000369208 DNHD1Q96M86 4753 aa3.27□□□□□ -1.89
SIM1-202ENST00000369208 STARD9Q9P2P6 4700 aa3.24□□□□□ -1.89
SIM1-202ENST00000369208 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
SIM1-202ENST00000369208 RYR1P21817 5038 aa3.24□□□□□ -1.89
SIM1-202ENST00000369208 MT1LQ93083 61 aa3.24□□□□□ -1.89
SIM1-202ENST00000369208 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
SIM1-202ENST00000369208 PRM1P04553 51 aa3.22□□□□□ -1.89
SIM1-202ENST00000369208 APOBP04114 4563 aaKnown RBP3.22□□□□□ -1.89
SIM1-202ENST00000369208 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
SIM1-202ENST00000369208 PKD1P98161 4303 aa3.19□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
SIM1-202ENST00000369208 RYR3Q15413 4870 aa3.19□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP17-1Q9BYP8 105 aa3.18□□□□□ -1.9
SIM1-202ENST00000369208 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP19-6Q3LI70 58 aa3.16□□□□□ -1.9
SIM1-202ENST00000369208 MT4P47944 62 aa3.16□□□□□ -1.9
SIM1-202ENST00000369208 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
SIM1-202ENST00000369208 MT1EP04732 61 aa3.14□□□□□ -1.91
SIM1-202ENST00000369208 HERC1Q15751 4861 aa3.11□□□□□ -1.91
SIM1-202ENST00000369208 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
SIM1-202ENST00000369208 RYR2Q92736 4967 aa3.07□□□□□ -1.92
SIM1-202ENST00000369208 MT1MQ8N339 61 aa3.07□□□□□ -1.92
SIM1-202ENST00000369208 MT1AP04731 61 aa3.04□□□□□ -1.92
SIM1-202ENST00000369208 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
SIM1-202ENST00000369208 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SIM1-202ENST00000369208 TNXBP22105 4242 aa3.01□□□□□ -1.93
SIM1-202ENST00000369208 HYDINQ4G0P3 5121 aa3□□□□□ -1.93
SIM1-202ENST00000369208 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms