RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
GOPC-202ENST00000368498 FRAS1Q86XX4 4008 aa6.27□□□□□ -1.41
GOPC-202ENST00000368498 KMT2AQ03164 3969 aa6.26□□□□□ -1.41
GOPC-202ENST00000368498 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
GOPC-202ENST00000368498 PRKDCP78527 4128 aaKnown RBP6.24□□□□□ -1.41
GOPC-202ENST00000368498 VPS13DQ5THJ4 4388 aa6.2□□□□□ -1.42
GOPC-202ENST00000368498 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
GOPC-202ENST00000368498 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
GOPC-202ENST00000368498 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
GOPC-202ENST00000368498 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
GOPC-202ENST00000368498 DNAH2Q9P225 4427 aa6.14□□□□□ -1.43
GOPC-202ENST00000368498 HECTD4Q9Y4D8 3996 aa6.13□□□□□ -1.43
GOPC-202ENST00000368498 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
GOPC-202ENST00000368498 DNHD1Q96M86 4753 aa6.11□□□□□ -1.43
GOPC-202ENST00000368498 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
GOPC-202ENST00000368498 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
GOPC-202ENST00000368498 DNAH5Q8TE73 4624 aa6.01□□□□□ -1.45
GOPC-202ENST00000368498 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
GOPC-202ENST00000368498 LORP23490 312 aaPredicted RBP5.98□□□□□ -1.45
GOPC-202ENST00000368498 ALMS1Q8TCU4 4167 aa5.96□□□□□ -1.45
GOPC-202ENST00000368498 HYDINQ4G0P3 5121 aa5.94□□□□□ -1.46
GOPC-202ENST00000368498 VPS13BQ7Z7G8 4022 aa5.94□□□□□ -1.46
GOPC-202ENST00000368498 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
GOPC-202ENST00000368498 FAT1Q14517 4588 aa5.89□□□□□ -1.47
GOPC-202ENST00000368498 INE1O15225 51 aa5.88□□□□□ -1.47
GOPC-202ENST00000368498 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
GOPC-202ENST00000368498 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
GOPC-202ENST00000368498 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
GOPC-202ENST00000368498 PKD1P98161 4303 aa5.77□□□□□ -1.49
GOPC-202ENST00000368498 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
GOPC-202ENST00000368498 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
GOPC-202ENST00000368498 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
GOPC-202ENST00000368498 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
GOPC-202ENST00000368498 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
GOPC-202ENST00000368498 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
GOPC-202ENST00000368498 MYCBP2O75592 4640 aa5.69□□□□□ -1.5
GOPC-202ENST00000368498 LRP1Q07954 4544 aaKnown RBP5.64□□□□□ -1.51
GOPC-202ENST00000368498 APOBP04114 4563 aaKnown RBP5.6□□□□□ -1.51
GOPC-202ENST00000368498 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
GOPC-202ENST00000368498 KMT2CQ8NEZ4 4911 aaKnown RBP5.52□□□□□ -1.53
GOPC-202ENST00000368498 KRTAP4-1Q9BYQ7 146 aa5.5□□□□□ -1.53
GOPC-202ENST00000368498 RYR1P21817 5038 aa5.48□□□□□ -1.53
GOPC-202ENST00000368498 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
GOPC-202ENST00000368498 RYR2Q92736 4967 aa5.46□□□□□ -1.53
GOPC-202ENST00000368498 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
GOPC-202ENST00000368498 HSPG2P98160 4391 aa5.45□□□□□ -1.54
GOPC-202ENST00000368498 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
GOPC-202ENST00000368498 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.55
GOPC-202ENST00000368498 RYR3Q15413 4870 aa5.38□□□□□ -1.55
GOPC-202ENST00000368498 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
GOPC-202ENST00000368498 LRP2P98164 4655 aa5.36□□□□□ -1.55
GOPC-202ENST00000368498 TNXBP22105 4242 aa5.32□□□□□ -1.56
GOPC-202ENST00000368498 LPAP08519 4548 aa5.28□□□□□ -1.56
GOPC-202ENST00000368498 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
GOPC-202ENST00000368498 MT2AP02795 61 aa5.16□□□□□ -1.58
GOPC-202ENST00000368498 EPPK1P58107 5090 aaKnown RBP5.13□□□□□ -1.59
GOPC-202ENST00000368498 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
GOPC-202ENST00000368498 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
GOPC-202ENST00000368498 MT1FP04733 61 aa5.12□□□□□ -1.59
GOPC-202ENST00000368498 MT1HP80294 61 aa5.12□□□□□ -1.59
GOPC-202ENST00000368498 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
GOPC-202ENST00000368498 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
GOPC-202ENST00000368498 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
GOPC-202ENST00000368498 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
GOPC-202ENST00000368498 HERC2O95714 4834 aa4.97□□□□□ -1.61
GOPC-202ENST00000368498 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
GOPC-202ENST00000368498 MUC2Q02817 5179 aa4.96□□□□□ -1.62
GOPC-202ENST00000368498 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
GOPC-202ENST00000368498 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
GOPC-202ENST00000368498 MUC17Q685J3 4493 aa4.84□□□□□ -1.64
GOPC-202ENST00000368498 MT1XP80297 61 aa4.81□□□□□ -1.64
GOPC-202ENST00000368498 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
GOPC-202ENST00000368498 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
GOPC-202ENST00000368498 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
GOPC-202ENST00000368498 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
GOPC-202ENST00000368498 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
GOPC-202ENST00000368498 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
GOPC-202ENST00000368498 PCLOQ9Y6V0 5065 aa4.74□□□□□ -1.65
GOPC-202ENST00000368498 HERC1Q15751 4861 aa4.74□□□□□ -1.65
GOPC-202ENST00000368498 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
GOPC-202ENST00000368498 MT1BP07438 61 aa4.73□□□□□ -1.65
GOPC-202ENST00000368498 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
GOPC-202ENST00000368498 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.66
GOPC-202ENST00000368498 MT1GP13640 62 aa4.65□□□□□ -1.66
GOPC-202ENST00000368498 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
GOPC-202ENST00000368498 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
GOPC-202ENST00000368498 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
GOPC-202ENST00000368498 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
GOPC-202ENST00000368498 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
GOPC-202ENST00000368498 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
GOPC-202ENST00000368498 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
GOPC-202ENST00000368498 HMCN2Q8NDA2 5059 aa4.53□□□□□ -1.68
GOPC-202ENST00000368498 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
GOPC-202ENST00000368498 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
GOPC-202ENST00000368498 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
GOPC-202ENST00000368498 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.72
GOPC-202ENST00000368498 MT1LQ93083 61 aa4.34□□□□□ -1.72
GOPC-202ENST00000368498 LCE2BO14633 110 aa4.33□□□□□ -1.72
GOPC-202ENST00000368498 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
GOPC-202ENST00000368498 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms