RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 I3L3M4 83 aa1.87□□□□□ -2.11
ECHDC1-205ENST00000368295 NDUFA4O00483 81 aa1.87□□□□□ -2.11
ECHDC1-205ENST00000368295 LINC00959A0A1B0GUT2 108 aa1.86□□□□□ -2.11
ECHDC1-205ENST00000368295 ACYP2P14621 99 aa1.86□□□□□ -2.11
ECHDC1-205ENST00000368295 Q6ZSA8 131 aa1.86□□□□□ -2.11
ECHDC1-205ENST00000368295 COA5Q86WW8 74 aa1.85□□□□□ -2.11
ECHDC1-205ENST00000368295 A0A1B0GU69 56 aa1.85□□□□□ -2.11
ECHDC1-205ENST00000368295 KRTAP2-3P0C7H8 128 aa1.85□□□□□ -2.11
ECHDC1-205ENST00000368295 ARL14EPLP0DKL9 152 aa1.85□□□□□ -2.11
ECHDC1-205ENST00000368295 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
ECHDC1-205ENST00000368295 KRTAP2-4Q9BYR9 128 aa1.85□□□□□ -2.11
ECHDC1-205ENST00000368295 NCR3O14931 201 aa1.84□□□□□ -2.11
ECHDC1-205ENST00000368295 COX7BP24311 80 aa1.84□□□□□ -2.11
ECHDC1-205ENST00000368295 KRTAP10-8P60410 259 aa1.84□□□□□ -2.11
ECHDC1-205ENST00000368295 MT1HP80294 61 aa1.84□□□□□ -2.11
ECHDC1-205ENST00000368295 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
ECHDC1-205ENST00000368295 KCNQ1DNQ9H478 68 aa1.84□□□□□ -2.11
ECHDC1-205ENST00000368295 IGKV2-28A0A075B6P5 120 aa1.83□□□□□ -2.12
ECHDC1-205ENST00000368295 H0YGX0 51 aa1.83□□□□□ -2.12
ECHDC1-205ENST00000368295 IGKV2D-28P01615 120 aa1.83□□□□□ -2.12
ECHDC1-205ENST00000368295 LEAP2Q969E1 77 aa1.83□□□□□ -2.12
ECHDC1-205ENST00000368295 ETDCA0A1B0GVM5 59 aa1.83□□□□□ -2.12
ECHDC1-205ENST00000368295 RPL38P63173 70 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-205ENST00000368295 Q6ZQY7 126 aa1.82□□□□□ -2.12
ECHDC1-205ENST00000368295 ANAPC11Q9NYG5 84 aa1.82□□□□□ -2.12
ECHDC1-205ENST00000368295 SPINK4O60575 86 aa1.81□□□□□ -2.12
ECHDC1-205ENST00000368295 FXYD6P3P58550 94 aa1.81□□□□□ -2.12
ECHDC1-205ENST00000368295 PRR9Q5T870 116 aa1.81□□□□□ -2.12
ECHDC1-205ENST00000368295 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.81□□□□□ -2.12
ECHDC1-205ENST00000368295 IGKV2-24A0A0C4DH68 120 aa1.81□□□□□ -2.12
ECHDC1-205ENST00000368295 KRTAP13-2Q52LG2 175 aa1.81□□□□□ -2.12
ECHDC1-205ENST00000368295 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
ECHDC1-205ENST00000368295 SMIM11BQ8TCY0 68 aa1.79□□□□□ -2.12
ECHDC1-205ENST00000368295 TMEM167BQ9NRX6 74 aa1.79□□□□□ -2.12
ECHDC1-205ENST00000368295 TIMM8BQ9Y5J9 83 aaPredicted RBP1.79□□□□□ -2.12
ECHDC1-205ENST00000368295 PLAC4Q8WY50 150 aa1.79□□□□□ -2.12
ECHDC1-205ENST00000368295 CPSF4LA6NMK7 179 aaKnown RBP1.78□□□□□ -2.12
ECHDC1-205ENST00000368295 NDUFA3O95167 84 aa1.78□□□□□ -2.12
ECHDC1-205ENST00000368295 KRTAP1-4P0C5Y4 121 aa1.78□□□□□ -2.12
ECHDC1-205ENST00000368295 Q6ZRX8 168 aa1.78□□□□□ -2.13
ECHDC1-205ENST00000368295 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
ECHDC1-205ENST00000368295 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
ECHDC1-205ENST00000368295 PP632Q6XCG6 107 aa1.77□□□□□ -2.13
ECHDC1-205ENST00000368295 GVQW2A0A096LPI5 108 aaPredicted RBP1.76□□□□□ -2.13
ECHDC1-205ENST00000368295 SPART-AS1P0CW21 52 aa1.76□□□□□ -2.13
ECHDC1-205ENST00000368295 KRTAP2-1Q9BYU5 128 aa1.76□□□□□ -2.13
ECHDC1-205ENST00000368295 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
ECHDC1-205ENST00000368295 SPRR5A0A1B0GTR4 108 aa1.76□□□□□ -2.13
ECHDC1-205ENST00000368295 APELAP0DMC3 54 aa1.76□□□□□ -2.13
ECHDC1-205ENST00000368295 SSBP3-AS1Q7Z2R9 100 aa1.75□□□□□ -2.13
ECHDC1-205ENST00000368295 M0R2T5 61 aa1.74□□□□□ -2.13
ECHDC1-205ENST00000368295 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
ECHDC1-205ENST00000368295 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-205ENST00000368295 IGFL1Q6UW32 110 aa1.74□□□□□ -2.13
ECHDC1-205ENST00000368295 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
ECHDC1-205ENST00000368295 RPS27P42677 84 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-205ENST00000368295 KRTAP12-2P59991 146 aa1.73□□□□□ -2.13
ECHDC1-205ENST00000368295 DEFB130BP0DP73 79 aa1.72□□□□□ -2.13
ECHDC1-205ENST00000368295 DEFB130AP0DP74 79 aa1.72□□□□□ -2.13
ECHDC1-205ENST00000368295 DEFB131AP59861 70 aa1.72□□□□□ -2.13
ECHDC1-205ENST00000368295 LINC00575Q6W349 94 aa1.71□□□□□ -2.14
ECHDC1-205ENST00000368295 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
ECHDC1-205ENST00000368295 CRIP1P50238 77 aa1.7□□□□□ -2.14
ECHDC1-205ENST00000368295 KRTAP19-6Q3LI70 58 aa1.7□□□□□ -2.14
ECHDC1-205ENST00000368295 SMIM2Q9BVW6 85 aa1.7□□□□□ -2.14
ECHDC1-205ENST00000368295 LINC00158P58513 81 aa1.7□□□□□ -2.14
ECHDC1-205ENST00000368295 UNQ6190/PRO20217Q6UXQ8 127 aa1.7□□□□□ -2.14
ECHDC1-205ENST00000368295 Q8IZM0 81 aa1.69□□□□□ -2.14
ECHDC1-205ENST00000368295 A0A096LPF7 62 aa1.68□□□□□ -2.14
ECHDC1-205ENST00000368295 LINC00308Q8TCZ7 52 aa1.68□□□□□ -2.14
ECHDC1-205ENST00000368295 USMG5Q96IX5 58 aa1.68□□□□□ -2.14
ECHDC1-205ENST00000368295 CNFNQ9BYD5 112 aa1.68□□□□□ -2.14
ECHDC1-205ENST00000368295 H3BUA1 57 aa1.68□□□□□ -2.14
ECHDC1-205ENST00000368295 LCE3EQ5T5B0 92 aa1.68□□□□□ -2.14
ECHDC1-205ENST00000368295 WFDC10BQ8IUB3 73 aa1.68□□□□□ -2.14
ECHDC1-205ENST00000368295 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-205ENST00000368295 CDKN2A-AS1Q9UH64 79 aa1.67□□□□□ -2.14
ECHDC1-205ENST00000368295 NDUFA1O15239 70 aa1.67□□□□□ -2.14
ECHDC1-205ENST00000368295 KRTAP13-3Q3SY46 172 aa1.67□□□□□ -2.14
ECHDC1-205ENST00000368295 COX6B2Q6YFQ2 88 aa1.67□□□□□ -2.14
ECHDC1-205ENST00000368295 CRIPTQ9P021 101 aa1.67□□□□□ -2.14
ECHDC1-205ENST00000368295 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-205ENST00000368295 DEFB1P60022 68 aa1.66□□□□□ -2.14
ECHDC1-205ENST00000368295 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.14
ECHDC1-205ENST00000368295 K7EQZ3 153 aa1.64□□□□□ -2.15
ECHDC1-205ENST00000368295 SPINK6Q6UWN8 80 aa1.64□□□□□ -2.15
ECHDC1-205ENST00000368295 RHPN1-AS1Q9BWJ2 59 aa1.64□□□□□ -2.15
ECHDC1-205ENST00000368295 SPRR2EP22531 72 aa1.63□□□□□ -2.15
ECHDC1-205ENST00000368295 SPRR2BP35325 72 aa1.63□□□□□ -2.15
ECHDC1-205ENST00000368295 SPRR2AP35326 72 aa1.63□□□□□ -2.15
ECHDC1-205ENST00000368295 RPL39P5Q59GN2 51 aa1.63□□□□□ -2.15
ECHDC1-205ENST00000368295 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
ECHDC1-205ENST00000368295 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
ECHDC1-205ENST00000368295 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
ECHDC1-205ENST00000368295 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
ECHDC1-205ENST00000368295 TP53AIP1Q9HCN2 124 aa1.62□□□□□ -2.15
ECHDC1-205ENST00000368295 IAPPP10997 89 aa1.61□□□□□ -2.15
ECHDC1-205ENST00000368295 SPINK9Q5DT21 86 aa1.61□□□□□ -2.15
ECHDC1-205ENST00000368295 MRPL34Q9BQ48 92 aaKnown RBP1.61□□□□□ -2.15
ECHDC1-205ENST00000368295 MT1FP04733 61 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms