RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 DNAH5Q8TE73 4624 aa4.73□□□□□ -1.65
PTPRK-205ENST00000368213 LORP23490 312 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-205ENST00000368213 KRTAP3-3Q9BYR6 98 aa4.72□□□□□ -1.65
PTPRK-205ENST00000368213 PLECQ15149 4684 aaKnown RBP4.71□□□□□ -1.66
PTPRK-205ENST00000368213 DNAH1Q9P2D7 4330 aa4.71□□□□□ -1.66
PTPRK-205ENST00000368213 PRKDCP78527 4128 aaKnown RBP4.69□□□□□ -1.66
PTPRK-205ENST00000368213 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
PTPRK-205ENST00000368213 DNAH11Q96DT5 4516 aa4.68□□□□□ -1.66
PTPRK-205ENST00000368213 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
PTPRK-205ENST00000368213 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
PTPRK-205ENST00000368213 DNAH10Q8IVF4 4471 aa4.63□□□□□ -1.67
PTPRK-205ENST00000368213 MT1HP80294 61 aa4.62□□□□□ -1.67
PTPRK-205ENST00000368213 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
PTPRK-205ENST00000368213 KMT2AQ03164 3969 aa4.59□□□□□ -1.67
PTPRK-205ENST00000368213 KRTAP4-1Q9BYQ7 146 aa4.59□□□□□ -1.68
PTPRK-205ENST00000368213 FAT1Q14517 4588 aa4.58□□□□□ -1.68
PTPRK-205ENST00000368213 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
PTPRK-205ENST00000368213 LYSTQ99698 3801 aa4.57□□□□□ -1.68
PTPRK-205ENST00000368213 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
PTPRK-205ENST00000368213 RYR1P21817 5038 aa4.53□□□□□ -1.68
PTPRK-205ENST00000368213 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
PTPRK-205ENST00000368213 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
PTPRK-205ENST00000368213 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
PTPRK-205ENST00000368213 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
PTPRK-205ENST00000368213 ANK2Q01484 3957 aa4.5□□□□□ -1.69
PTPRK-205ENST00000368213 VPS13DQ5THJ4 4388 aa4.49□□□□□ -1.69
PTPRK-205ENST00000368213 MT2AP02795 61 aa4.49□□□□□ -1.69
PTPRK-205ENST00000368213 KRTAP17-1Q9BYP8 105 aa4.46□□□□□ -1.7
PTPRK-205ENST00000368213 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
PTPRK-205ENST00000368213 FAT2Q9NYQ8 4349 aa4.44□□□□□ -1.7
PTPRK-205ENST00000368213 CMYA5Q8N3K9 4069 aa4.43□□□□□ -1.7
PTPRK-205ENST00000368213 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
PTPRK-205ENST00000368213 RYR3Q15413 4870 aa4.42□□□□□ -1.7
PTPRK-205ENST00000368213 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
PTPRK-205ENST00000368213 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.71
PTPRK-205ENST00000368213 MT1FP04733 61 aa4.38□□□□□ -1.71
PTPRK-205ENST00000368213 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
PTPRK-205ENST00000368213 HYDINQ4G0P3 5121 aa4.37□□□□□ -1.71
PTPRK-205ENST00000368213 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
PTPRK-205ENST00000368213 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
PTPRK-205ENST00000368213 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
PTPRK-205ENST00000368213 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
PTPRK-205ENST00000368213 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
PTPRK-205ENST00000368213 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
PTPRK-205ENST00000368213 DNAH3Q8TD57 4116 aa4.3□□□□□ -1.72
PTPRK-205ENST00000368213 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
PTPRK-205ENST00000368213 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
PTPRK-205ENST00000368213 KMT2CQ8NEZ4 4911 aaKnown RBP4.27□□□□□ -1.73
PTPRK-205ENST00000368213 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
PTPRK-205ENST00000368213 KRTAP10-7P60409 375 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-205ENST00000368213 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
PTPRK-205ENST00000368213 RYR2Q92736 4967 aa4.23□□□□□ -1.73
PTPRK-205ENST00000368213 HERC2O95714 4834 aa4.22□□□□□ -1.73
PTPRK-205ENST00000368213 PKHD1P08F94 4074 aa4.2□□□□□ -1.74
PTPRK-205ENST00000368213 BIRC6Q9NR09 4857 aa4.19□□□□□ -1.74
PTPRK-205ENST00000368213 SPRR2EP22531 72 aa4.19□□□□□ -1.74
PTPRK-205ENST00000368213 SPRR2BP35325 72 aa4.19□□□□□ -1.74
PTPRK-205ENST00000368213 SPRR2AP35326 72 aa4.19□□□□□ -1.74
PTPRK-205ENST00000368213 LPAP08519 4548 aa4.15□□□□□ -1.75
PTPRK-205ENST00000368213 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
PTPRK-205ENST00000368213 HSPG2P98160 4391 aa4.12□□□□□ -1.75
PTPRK-205ENST00000368213 LRP2P98164 4655 aa4.1□□□□□ -1.75
PTPRK-205ENST00000368213 HECTD4Q9Y4D8 3996 aa4.08□□□□□ -1.76
PTPRK-205ENST00000368213 SPRR2DP22532 72 aa4.06□□□□□ -1.76
PTPRK-205ENST00000368213 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
PTPRK-205ENST00000368213 HERC1Q15751 4861 aa4.04□□□□□ -1.76
PTPRK-205ENST00000368213 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
PTPRK-205ENST00000368213 PCLOQ9Y6V0 5065 aa4.01□□□□□ -1.77
PTPRK-205ENST00000368213 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
PTPRK-205ENST00000368213 KRTAP19-1Q8IUB9 90 aa4.01□□□□□ -1.77
PTPRK-205ENST00000368213 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
PTPRK-205ENST00000368213 LCE2BO14633 110 aa3.98□□□□□ -1.77
PTPRK-205ENST00000368213 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
PTPRK-205ENST00000368213 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
PTPRK-205ENST00000368213 LCE2CQ5TA81 110 aa3.94□□□□□ -1.78
PTPRK-205ENST00000368213 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
PTPRK-205ENST00000368213 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
PTPRK-205ENST00000368213 MT1BP07438 61 aa3.93□□□□□ -1.78
PTPRK-205ENST00000368213 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
PTPRK-205ENST00000368213 PKD1P98161 4303 aa3.92□□□□□ -1.78
PTPRK-205ENST00000368213 MT1XP80297 61 aa3.91□□□□□ -1.78
PTPRK-205ENST00000368213 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
PTPRK-205ENST00000368213 MT3P25713 68 aa3.9□□□□□ -1.78
PTPRK-205ENST00000368213 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
PTPRK-205ENST00000368213 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
PTPRK-205ENST00000368213 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
PTPRK-205ENST00000368213 MT1GP13640 62 aa3.8□□□□□ -1.8
PTPRK-205ENST00000368213 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
PTPRK-205ENST00000368213 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
PTPRK-205ENST00000368213 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
PTPRK-205ENST00000368213 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
PTPRK-205ENST00000368213 TNXBP22105 4242 aa3.71□□□□□ -1.81
PTPRK-205ENST00000368213 LCE2DQ5TA82 110 aaPredicted RBP3.71□□□□□ -1.82
PTPRK-205ENST00000368213 KRTAP19-2Q3LHN2 52 aa3.7□□□□□ -1.82
PTPRK-205ENST00000368213 MUC2Q02817 5179 aa3.68□□□□□ -1.82
PTPRK-205ENST00000368213 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
PTPRK-205ENST00000368213 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
PTPRK-205ENST00000368213 MT4P47944 62 aa3.63□□□□□ -1.83
PTPRK-205ENST00000368213 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-205ENST00000368213 FAT4Q6V0I7 4981 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms