RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
CD46-207ENST00000367041 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
CD46-207ENST00000367041 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.77
CD46-207ENST00000367041 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
CD46-207ENST00000367041 A0A1B0GVY2 172 aa4.02□□□□□ -1.77
CD46-207ENST00000367041 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
CD46-207ENST00000367041 HYDINQ4G0P3 5121 aa4.01□□□□□ -1.77
CD46-207ENST00000367041 PKHD1P08F94 4074 aa4□□□□□ -1.77
CD46-207ENST00000367041 EPPK1P58107 5090 aaKnown RBP3.97□□□□□ -1.77
CD46-207ENST00000367041 S4R3F8 94 aa3.97□□□□□ -1.77
CD46-207ENST00000367041 A0A0D9SG42 100 aa3.97□□□□□ -1.77
CD46-207ENST00000367041 KRTAP12-2P59991 146 aa3.96□□□□□ -1.77
CD46-207ENST00000367041 XP32Q5T750 250 aa3.96□□□□□ -1.78
CD46-207ENST00000367041 HERC2O95714 4834 aa3.94□□□□□ -1.78
CD46-207ENST00000367041 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
CD46-207ENST00000367041 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
CD46-207ENST00000367041 APOBP04114 4563 aaKnown RBP3.93□□□□□ -1.78
CD46-207ENST00000367041 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.78
CD46-207ENST00000367041 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
CD46-207ENST00000367041 TNXBP22105 4242 aa3.88□□□□□ -1.79
CD46-207ENST00000367041 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
CD46-207ENST00000367041 RYR1P21817 5038 aa3.85□□□□□ -1.79
CD46-207ENST00000367041 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
CD46-207ENST00000367041 FAT3Q8TDW7 4589 aa3.83□□□□□ -1.8
CD46-207ENST00000367041 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
CD46-207ENST00000367041 HSPG2P98160 4391 aa3.81□□□□□ -1.8
CD46-207ENST00000367041 M0QZ58 72 aa3.8□□□□□ -1.8
CD46-207ENST00000367041 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
CD46-207ENST00000367041 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
CD46-207ENST00000367041 SMR3BP02814 79 aaPredicted RBP3.8□□□□□ -1.8
CD46-207ENST00000367041 FAT1Q14517 4588 aa3.77□□□□□ -1.81
CD46-207ENST00000367041 Q5VSD8 79 aa3.76□□□□□ -1.81
CD46-207ENST00000367041 KRTAP4-5Q9BYR2 181 aa3.75□□□□□ -1.81
CD46-207ENST00000367041 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
CD46-207ENST00000367041 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
CD46-207ENST00000367041 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
CD46-207ENST00000367041 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
CD46-207ENST00000367041 J3QL48 77 aa3.68□□□□□ -1.82
CD46-207ENST00000367041 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
CD46-207ENST00000367041 LPAP08519 4548 aa3.66□□□□□ -1.82
CD46-207ENST00000367041 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
CD46-207ENST00000367041 R4GN34 69 aa3.59□□□□□ -1.83
CD46-207ENST00000367041 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
CD46-207ENST00000367041 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
CD46-207ENST00000367041 MT1HL1P0DM35 61 aa3.56□□□□□ -1.84
CD46-207ENST00000367041 LRP2P98164 4655 aa3.52□□□□□ -1.85
CD46-207ENST00000367041 HERC1Q15751 4861 aa3.51□□□□□ -1.85
CD46-207ENST00000367041 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
CD46-207ENST00000367041 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
CD46-207ENST00000367041 MUC17Q685J3 4493 aa3.46□□□□□ -1.85
CD46-207ENST00000367041 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
CD46-207ENST00000367041 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
CD46-207ENST00000367041 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
CD46-207ENST00000367041 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
CD46-207ENST00000367041 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
CD46-207ENST00000367041 KRTAP4-1Q9BYQ7 146 aa3.38□□□□□ -1.87
CD46-207ENST00000367041 TNP1P09430 55 aa3.36□□□□□ -1.87
CD46-207ENST00000367041 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
CD46-207ENST00000367041 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
CD46-207ENST00000367041 UBR4Q5T4S7 5183 aa3.28□□□□□ -1.88
CD46-207ENST00000367041 INE1O15225 51 aa3.28□□□□□ -1.88
CD46-207ENST00000367041 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
CD46-207ENST00000367041 MUC2Q02817 5179 aa3.22□□□□□ -1.89
CD46-207ENST00000367041 LCE2AQ5TA79 106 aaPredicted RBP3.2□□□□□ -1.9
CD46-207ENST00000367041 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
CD46-207ENST00000367041 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
CD46-207ENST00000367041 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
CD46-207ENST00000367041 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.9
CD46-207ENST00000367041 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
CD46-207ENST00000367041 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
CD46-207ENST00000367041 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
CD46-207ENST00000367041 LCE2CQ5TA81 110 aa3.07□□□□□ -1.92
CD46-207ENST00000367041 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.92
CD46-207ENST00000367041 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
CD46-207ENST00000367041 MT1HP80294 61 aa3.02□□□□□ -1.93
CD46-207ENST00000367041 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
CD46-207ENST00000367041 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
CD46-207ENST00000367041 MT1XP80297 61 aa2.99□□□□□ -1.93
CD46-207ENST00000367041 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
CD46-207ENST00000367041 KRTAP4-8Q9BYQ9 185 aa2.97□□□□□ -1.93
CD46-207ENST00000367041 M0R2T5 61 aa2.97□□□□□ -1.93
CD46-207ENST00000367041 MT1FP04733 61 aa2.96□□□□□ -1.94
CD46-207ENST00000367041 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
CD46-207ENST00000367041 MT2AP02795 61 aa2.95□□□□□ -1.94
CD46-207ENST00000367041 MT1BP07438 61 aa2.95□□□□□ -1.94
CD46-207ENST00000367041 KRTAP9-8Q9BYQ0 159 aa2.93□□□□□ -1.94
CD46-207ENST00000367041 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
CD46-207ENST00000367041 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
CD46-207ENST00000367041 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
CD46-207ENST00000367041 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
CD46-207ENST00000367041 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
CD46-207ENST00000367041 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
CD46-207ENST00000367041 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
CD46-207ENST00000367041 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
CD46-207ENST00000367041 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
CD46-207ENST00000367041 KRTAP9-3Q9BYQ3 159 aa2.79□□□□□ -1.96
CD46-207ENST00000367041 LCE2BO14633 110 aa2.78□□□□□ -1.97
CD46-207ENST00000367041 KRTAP4-7Q9BYR0 210 aa2.76□□□□□ -1.97
CD46-207ENST00000367041 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
CD46-207ENST00000367041 KRTAP9-7A8MTY7 169 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms