RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
CLSTN1-201ENST00000361311 MT1HL1P0DM35 61 aa7.23□□□□□ -1.25
CLSTN1-201ENST00000361311 DNAH8Q96JB1 4490 aa7.22□□□□□ -1.25
CLSTN1-201ENST00000361311 DNAH17Q9UFH2 4485 aa7.18□□□□□ -1.26
CLSTN1-201ENST00000361311 DNAH5Q8TE73 4624 aa7.13□□□□□ -1.27
CLSTN1-201ENST00000361311 VPS13DQ5THJ4 4388 aa7.12□□□□□ -1.27
CLSTN1-201ENST00000361311 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
CLSTN1-201ENST00000361311 DNAH2Q9P225 4427 aa7.1□□□□□ -1.27
CLSTN1-201ENST00000361311 ANK2Q01484 3957 aa7.06□□□□□ -1.28
CLSTN1-201ENST00000361311 LRP1BQ9NZR2 4599 aa7.04□□□□□ -1.28
CLSTN1-201ENST00000361311 INE1O15225 51 aa7.03□□□□□ -1.28
CLSTN1-201ENST00000361311 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.28
CLSTN1-201ENST00000361311 STARD9Q9P2P6 4700 aa7.01□□□□□ -1.29
CLSTN1-201ENST00000361311 DNAH3Q8TD57 4116 aa6.98□□□□□ -1.29
CLSTN1-201ENST00000361311 CMYA5Q8N3K9 4069 aa6.97□□□□□ -1.29
CLSTN1-201ENST00000361311 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
CLSTN1-201ENST00000361311 LYSTQ99698 3801 aa6.93□□□□□ -1.3
CLSTN1-201ENST00000361311 FAT1Q14517 4588 aa6.92□□□□□ -1.3
CLSTN1-201ENST00000361311 FRAS1Q86XX4 4008 aa6.88□□□□□ -1.31
CLSTN1-201ENST00000361311 KMT2AQ03164 3969 aa6.84□□□□□ -1.31
CLSTN1-201ENST00000361311 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
CLSTN1-201ENST00000361311 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
CLSTN1-201ENST00000361311 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
CLSTN1-201ENST00000361311 SACSQ9NZJ4 4579 aa6.78□□□□□ -1.32
CLSTN1-201ENST00000361311 LCE3AQ5TA76 89 aa6.78□□□□□ -1.32
CLSTN1-201ENST00000361311 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
CLSTN1-201ENST00000361311 MYCBP2O75592 4640 aa6.72□□□□□ -1.33
CLSTN1-201ENST00000361311 HECTD4Q9Y4D8 3996 aa6.71□□□□□ -1.34
CLSTN1-201ENST00000361311 KRTAP10-12P60413 245 aa6.7□□□□□ -1.34
CLSTN1-201ENST00000361311 RYR1P21817 5038 aa6.7□□□□□ -1.34
CLSTN1-201ENST00000361311 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
CLSTN1-201ENST00000361311 APOBP04114 4563 aaKnown RBP6.68□□□□□ -1.34
CLSTN1-201ENST00000361311 KIAA1109Q2LD37 5005 aa6.66□□□□□ -1.34
CLSTN1-201ENST00000361311 DNAH7Q8WXX0 4024 aa6.64□□□□□ -1.35
CLSTN1-201ENST00000361311 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
CLSTN1-201ENST00000361311 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
CLSTN1-201ENST00000361311 FAT2Q9NYQ8 4349 aa6.56□□□□□ -1.36
CLSTN1-201ENST00000361311 RYR3Q15413 4870 aa6.51□□□□□ -1.37
CLSTN1-201ENST00000361311 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
CLSTN1-201ENST00000361311 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
CLSTN1-201ENST00000361311 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
CLSTN1-201ENST00000361311 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
CLSTN1-201ENST00000361311 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
CLSTN1-201ENST00000361311 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
CLSTN1-201ENST00000361311 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
CLSTN1-201ENST00000361311 HERC2O95714 4834 aa6.26□□□□□ -1.41
CLSTN1-201ENST00000361311 LRP2P98164 4655 aa6.26□□□□□ -1.41
CLSTN1-201ENST00000361311 RYR2Q92736 4967 aa6.24□□□□□ -1.41
CLSTN1-201ENST00000361311 KMT2CQ8NEZ4 4911 aaKnown RBP6.23□□□□□ -1.41
CLSTN1-201ENST00000361311 MT1HP80294 61 aa6.22□□□□□ -1.41
CLSTN1-201ENST00000361311 PKHD1P08F94 4074 aa6.19□□□□□ -1.42
CLSTN1-201ENST00000361311 MT2AP02795 61 aa6.16□□□□□ -1.42
CLSTN1-201ENST00000361311 BIRC6Q9NR09 4857 aa6.16□□□□□ -1.42
CLSTN1-201ENST00000361311 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
CLSTN1-201ENST00000361311 PKD1P98161 4303 aa6.1□□□□□ -1.43
CLSTN1-201ENST00000361311 MT1FP04733 61 aa6.1□□□□□ -1.43
CLSTN1-201ENST00000361311 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
CLSTN1-201ENST00000361311 HSPG2P98160 4391 aa6.05□□□□□ -1.44
CLSTN1-201ENST00000361311 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
CLSTN1-201ENST00000361311 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
CLSTN1-201ENST00000361311 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
CLSTN1-201ENST00000361311 PCLOQ9Y6V0 5065 aa5.94□□□□□ -1.46
CLSTN1-201ENST00000361311 PKHD1L1Q86WI1 4243 aa5.94□□□□□ -1.46
CLSTN1-201ENST00000361311 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.46
CLSTN1-201ENST00000361311 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.47
CLSTN1-201ENST00000361311 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.47
CLSTN1-201ENST00000361311 LPAP08519 4548 aa5.86□□□□□ -1.47
CLSTN1-201ENST00000361311 MT1XP80297 61 aa5.86□□□□□ -1.47
CLSTN1-201ENST00000361311 TNXBP22105 4242 aa5.81□□□□□ -1.48
CLSTN1-201ENST00000361311 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
CLSTN1-201ENST00000361311 HERC1Q15751 4861 aa5.78□□□□□ -1.48
CLSTN1-201ENST00000361311 MT1BP07438 61 aa5.77□□□□□ -1.49
CLSTN1-201ENST00000361311 MUC17Q685J3 4493 aa5.71□□□□□ -1.5
CLSTN1-201ENST00000361311 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
CLSTN1-201ENST00000361311 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
CLSTN1-201ENST00000361311 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
CLSTN1-201ENST00000361311 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
CLSTN1-201ENST00000361311 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
CLSTN1-201ENST00000361311 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
CLSTN1-201ENST00000361311 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
CLSTN1-201ENST00000361311 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
CLSTN1-201ENST00000361311 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
CLSTN1-201ENST00000361311 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
CLSTN1-201ENST00000361311 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
CLSTN1-201ENST00000361311 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
CLSTN1-201ENST00000361311 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
CLSTN1-201ENST00000361311 MT1GP13640 62 aa5.35□□□□□ -1.55
CLSTN1-201ENST00000361311 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
CLSTN1-201ENST00000361311 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
CLSTN1-201ENST00000361311 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
CLSTN1-201ENST00000361311 LCE2BO14633 110 aa5.28□□□□□ -1.56
CLSTN1-201ENST00000361311 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
CLSTN1-201ENST00000361311 SPRR2EP22531 72 aa5.27□□□□□ -1.57
CLSTN1-201ENST00000361311 SPRR2BP35325 72 aa5.27□□□□□ -1.57
CLSTN1-201ENST00000361311 SPRR2AP35326 72 aa5.27□□□□□ -1.57
CLSTN1-201ENST00000361311 MT1LQ93083 61 aa5.24□□□□□ -1.57
CLSTN1-201ENST00000361311 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
CLSTN1-201ENST00000361311 MUC2Q02817 5179 aa5.21□□□□□ -1.58
CLSTN1-201ENST00000361311 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
CLSTN1-201ENST00000361311 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms