RNA–Protein interactions for RNA: ENST00000360449.3

CPNE8-202, Transcript of copine 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CPNE8, Length 1,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-202ENST00000360449 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
CPNE8-202ENST00000360449 S4R3F8 94 aa1.91□□□□□ -2.1
CPNE8-202ENST00000360449 TENM3Q9P273 2699 aa1.91□□□□□ -2.1
CPNE8-202ENST00000360449 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
CPNE8-202ENST00000360449 A0A0D9SG42 100 aa1.9□□□□□ -2.1
CPNE8-202ENST00000360449 VWFP04275 2813 aa1.9□□□□□ -2.1
CPNE8-202ENST00000360449 PKD1L2Q7Z442 2459 aa1.9□□□□□ -2.1
CPNE8-202ENST00000360449 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
CPNE8-202ENST00000360449 PKD1L1Q8TDX9 2849 aa1.9□□□□□ -2.11
CPNE8-202ENST00000360449 DNAH6Q9C0G6 4158 aa1.9□□□□□ -2.11
CPNE8-202ENST00000360449 HECTD4Q9Y4D8 3996 aa1.9□□□□□ -2.11
CPNE8-202ENST00000360449 HECTD1Q9ULT8 2610 aa1.9□□□□□ -2.11
CPNE8-202ENST00000360449 FLNAP21333 2647 aaKnown RBP1.89□□□□□ -2.11
CPNE8-202ENST00000360449 SACSQ9NZJ4 4579 aa1.89□□□□□ -2.11
CPNE8-202ENST00000360449 DNAH11Q96DT5 4516 aa1.89□□□□□ -2.11
CPNE8-202ENST00000360449 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
CPNE8-202ENST00000360449 RPS29P62273 56 aaKnown RBP1.87□□□□□ -2.11
CPNE8-202ENST00000360449 CENPEQ02224 2701 aa1.87□□□□□ -2.11
CPNE8-202ENST00000360449 FLNCQ14315 2725 aa1.87□□□□□ -2.11
CPNE8-202ENST00000360449 PDZD2O15018 2839 aa1.87□□□□□ -2.11
CPNE8-202ENST00000360449 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
CPNE8-202ENST00000360449 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
CPNE8-202ENST00000360449 ACACBO00763 2458 aa1.86□□□□□ -2.11
CPNE8-202ENST00000360449 DNAH2Q9P225 4427 aa1.86□□□□□ -2.11
CPNE8-202ENST00000360449 MEGF8Q7Z7M0 2845 aa1.86□□□□□ -2.11
CPNE8-202ENST00000360449 ABCA12Q86UK0 2595 aa1.86□□□□□ -2.11
CPNE8-202ENST00000360449 PLECQ15149 4684 aaKnown RBP1.86□□□□□ -2.11
CPNE8-202ENST00000360449 HELZ2Q9BYK8 2649 aaKnown RBP1.86□□□□□ -2.11
CPNE8-202ENST00000360449 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
CPNE8-202ENST00000360449 NOTCH2Q04721 2471 aa1.84□□□□□ -2.12
CPNE8-202ENST00000360449 IGSF10Q6WRI0 2623 aa1.84□□□□□ -2.12
CPNE8-202ENST00000360449 CACNA1AO00555 2505 aa1.83□□□□□ -2.12
CPNE8-202ENST00000360449 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
CPNE8-202ENST00000360449 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
CPNE8-202ENST00000360449 FAM208BQ5VWN6 2430 aa1.83□□□□□ -2.12
CPNE8-202ENST00000360449 DNAH5Q8TE73 4624 aa1.83□□□□□ -2.12
CPNE8-202ENST00000360449 TENM1Q9UKZ4 2725 aa1.82□□□□□ -2.12
CPNE8-202ENST00000360449 C9orf92A6NGG3 77 aa1.82□□□□□ -2.12
CPNE8-202ENST00000360449 ACANP16112 2415 aa1.82□□□□□ -2.12
CPNE8-202ENST00000360449 MAST4O15021 2626 aa1.82□□□□□ -2.12
CPNE8-202ENST00000360449 KRTAP10-1P60331 282 aa1.82□□□□□ -2.12
CPNE8-202ENST00000360449 KMT2AQ03164 3969 aa1.82□□□□□ -2.12
CPNE8-202ENST00000360449 TGP01266 2768 aa1.81□□□□□ -2.12
CPNE8-202ENST00000360449 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
CPNE8-202ENST00000360449 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
CPNE8-202ENST00000360449 COL7A1Q02388 2944 aa1.8□□□□□ -2.12
CPNE8-202ENST00000360449 MYO18BQ8IUG5 2567 aa1.8□□□□□ -2.12
CPNE8-202ENST00000360449 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
CPNE8-202ENST00000360449 TEP1Q99973 2627 aaKnown RBP1.79□□□□□ -2.12
CPNE8-202ENST00000360449 STARD9Q9P2P6 4700 aa1.79□□□□□ -2.12
CPNE8-202ENST00000360449 NBEAL1Q6ZS30 2694 aa1.78□□□□□ -2.12
CPNE8-202ENST00000360449 STAB2Q8WWQ8 2551 aa1.78□□□□□ -2.12
CPNE8-202ENST00000360449 M0QZ58 72 aa1.78□□□□□ -2.12
CPNE8-202ENST00000360449 FLNBO75369 2602 aaKnown RBP1.78□□□□□ -2.12
CPNE8-202ENST00000360449 FBN3Q75N90 2809 aa1.77□□□□□ -2.13
CPNE8-202ENST00000360449 J3QKU1 62 aa1.76□□□□□ -2.13
CPNE8-202ENST00000360449 LRP1BQ9NZR2 4599 aa1.76□□□□□ -2.13
CPNE8-202ENST00000360449 FASNP49327 2511 aaKnown RBP1.76□□□□□ -2.13
CPNE8-202ENST00000360449 COL6A5A8TX70 2615 aa1.76□□□□□ -2.13
CPNE8-202ENST00000360449 NSD1Q96L73 2696 aaPredicted RBP1.76□□□□□ -2.13
CPNE8-202ENST00000360449 ATRQ13535 2644 aa1.75□□□□□ -2.13
CPNE8-202ENST00000360449 NOTCH1P46531 2555 aa1.75□□□□□ -2.13
CPNE8-202ENST00000360449 APOBP04114 4563 aaKnown RBP1.75□□□□□ -2.13
CPNE8-202ENST00000360449 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
CPNE8-202ENST00000360449 ITPR2Q14571 2701 aa1.74□□□□□ -2.13
CPNE8-202ENST00000360449 LRP1Q07954 4544 aaKnown RBP1.74□□□□□ -2.13
CPNE8-202ENST00000360449 USP24Q9UPU5 2620 aa1.74□□□□□ -2.13
CPNE8-202ENST00000360449 TNXBP22105 4242 aa1.73□□□□□ -2.13
CPNE8-202ENST00000360449 VPS13BQ7Z7G8 4022 aa1.72□□□□□ -2.13
CPNE8-202ENST00000360449 PKD1P98161 4303 aa1.72□□□□□ -2.13
CPNE8-202ENST00000360449 FAT2Q9NYQ8 4349 aa1.71□□□□□ -2.14
CPNE8-202ENST00000360449 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
CPNE8-202ENST00000360449 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
CPNE8-202ENST00000360449 DYNC1H1Q14204 4646 aaKnown RBP1.7□□□□□ -2.14
CPNE8-202ENST00000360449 HSPG2P98160 4391 aa1.7□□□□□ -2.14
CPNE8-202ENST00000360449 FAT3Q8TDW7 4589 aa1.69□□□□□ -2.14
CPNE8-202ENST00000360449 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
CPNE8-202ENST00000360449 FAT1Q14517 4588 aa1.68□□□□□ -2.14
CPNE8-202ENST00000360449 KRTAP10-4P60372 401 aaPredicted RBP1.68□□□□□ -2.14
CPNE8-202ENST00000360449 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
CPNE8-202ENST00000360449 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
CPNE8-202ENST00000360449 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
CPNE8-202ENST00000360449 MGAM2Q2M2H8 2515 aa1.66□□□□□ -2.14
CPNE8-202ENST00000360449 DMBT1Q9UGM3 2413 aaPredicted RBP1.66□□□□□ -2.14
CPNE8-202ENST00000360449 STAB1Q9NY15 2570 aa1.62□□□□□ -2.15
CPNE8-202ENST00000360449 SMR3BP02814 79 aaPredicted RBP1.62□□□□□ -2.15
CPNE8-202ENST00000360449 HYDINQ4G0P3 5121 aa1.62□□□□□ -2.15
CPNE8-202ENST00000360449 Q5VSD8 79 aa1.6□□□□□ -2.15
CPNE8-202ENST00000360449 TNP1P09430 55 aa1.59□□□□□ -2.15
CPNE8-202ENST00000360449 KRTAP21-3Q3LHN1 58 aa1.59□□□□□ -2.15
CPNE8-202ENST00000360449 FLGP20930 4061 aaPredicted RBP1.59□□□□□ -2.15
CPNE8-202ENST00000360449 DNHD1Q96M86 4753 aa1.57□□□□□ -2.16
CPNE8-202ENST00000360449 HERC1Q15751 4861 aa1.55□□□□□ -2.16
CPNE8-202ENST00000360449 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
CPNE8-202ENST00000360449 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
CPNE8-202ENST00000360449 LPAP08519 4548 aa1.5□□□□□ -2.17
CPNE8-202ENST00000360449 MT1HL1P0DM35 61 aa1.5□□□□□ -2.17
CPNE8-202ENST00000360449 LCE3AQ5TA76 89 aa1.5□□□□□ -2.17
CPNE8-202ENST00000360449 MUC17Q685J3 4493 aa1.49□□□□□ -2.17
CPNE8-202ENST00000360449 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms