RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 KRTAP10-8P60410 259 aa8.34□□□□□ -1.07
CTPS2-201ENST00000359276 FAT2Q9NYQ8 4349 aa8.31□□□□□ -1.08
CTPS2-201ENST00000359276 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
CTPS2-201ENST00000359276 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
CTPS2-201ENST00000359276 HYDINQ4G0P3 5121 aa8.23□□□□□ -1.09
CTPS2-201ENST00000359276 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
CTPS2-201ENST00000359276 M0QZ58 72 aa8.21□□□□□ -1.1
CTPS2-201ENST00000359276 XP32Q5T750 250 aa8.16□□□□□ -1.1
CTPS2-201ENST00000359276 R4GN34 69 aa8.16□□□□□ -1.1
CTPS2-201ENST00000359276 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.11
CTPS2-201ENST00000359276 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
CTPS2-201ENST00000359276 PKD1P98161 4303 aa8.12□□□□□ -1.11
CTPS2-201ENST00000359276 LUZP6Q538Z0 58 aa8.12□□□□□ -1.11
CTPS2-201ENST00000359276 DNHD1Q96M86 4753 aa8.12□□□□□ -1.11
CTPS2-201ENST00000359276 SACSQ9NZJ4 4579 aa8.09□□□□□ -1.11
CTPS2-201ENST00000359276 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
CTPS2-201ENST00000359276 LRP1Q07954 4544 aaKnown RBP8.02□□□□□ -1.13
CTPS2-201ENST00000359276 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
CTPS2-201ENST00000359276 KRTAP10-4P60372 401 aaPredicted RBP8□□□□□ -1.13
CTPS2-201ENST00000359276 Q5VSD8 79 aa7.99□□□□□ -1.13
CTPS2-201ENST00000359276 HSPG2P98160 4391 aa7.96□□□□□ -1.14
CTPS2-201ENST00000359276 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
CTPS2-201ENST00000359276 A0A1B0GVY2 172 aa7.86□□□□□ -1.15
CTPS2-201ENST00000359276 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
CTPS2-201ENST00000359276 LRP2P98164 4655 aa7.72□□□□□ -1.17
CTPS2-201ENST00000359276 PKHD1L1Q86WI1 4243 aa7.71□□□□□ -1.18
CTPS2-201ENST00000359276 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
CTPS2-201ENST00000359276 LPAP08519 4548 aa7.68□□□□□ -1.18
CTPS2-201ENST00000359276 KMT2CQ8NEZ4 4911 aaKnown RBP7.63□□□□□ -1.19
CTPS2-201ENST00000359276 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
CTPS2-201ENST00000359276 MT1HL1P0DM35 61 aa7.52□□□□□ -1.21
CTPS2-201ENST00000359276 TNXBP22105 4242 aa7.5□□□□□ -1.21
CTPS2-201ENST00000359276 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
CTPS2-201ENST00000359276 TNP1P09430 55 aa7.46□□□□□ -1.22
CTPS2-201ENST00000359276 KIAA1109Q2LD37 5005 aa7.45□□□□□ -1.22
CTPS2-201ENST00000359276 RYR1P21817 5038 aa7.43□□□□□ -1.22
CTPS2-201ENST00000359276 KRTAP17-1Q9BYP8 105 aa7.39□□□□□ -1.23
CTPS2-201ENST00000359276 J3QL48 77 aa7.35□□□□□ -1.23
CTPS2-201ENST00000359276 RYR3Q15413 4870 aa7.3□□□□□ -1.24
CTPS2-201ENST00000359276 RYR2Q92736 4967 aa7.29□□□□□ -1.24
CTPS2-201ENST00000359276 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
CTPS2-201ENST00000359276 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
CTPS2-201ENST00000359276 KRTAP4-5Q9BYR2 181 aa7.13□□□□□ -1.27
CTPS2-201ENST00000359276 MUC2Q02817 5179 aa7.09□□□□□ -1.27
CTPS2-201ENST00000359276 M0R2T5 61 aa7.07□□□□□ -1.28
CTPS2-201ENST00000359276 EPPK1P58107 5090 aaKnown RBP6.98□□□□□ -1.29
CTPS2-201ENST00000359276 KRTAP21-3Q3LHN1 58 aa6.95□□□□□ -1.3
CTPS2-201ENST00000359276 LCE3AQ5TA76 89 aa6.9□□□□□ -1.3
CTPS2-201ENST00000359276 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
CTPS2-201ENST00000359276 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
CTPS2-201ENST00000359276 MUC17Q685J3 4493 aa6.87□□□□□ -1.31
CTPS2-201ENST00000359276 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
CTPS2-201ENST00000359276 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
CTPS2-201ENST00000359276 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
CTPS2-201ENST00000359276 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
CTPS2-201ENST00000359276 INE1O15225 51 aa6.69□□□□□ -1.34
CTPS2-201ENST00000359276 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
CTPS2-201ENST00000359276 HERC2O95714 4834 aa6.65□□□□□ -1.34
CTPS2-201ENST00000359276 PCLOQ9Y6V0 5065 aa6.6□□□□□ -1.35
CTPS2-201ENST00000359276 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
CTPS2-201ENST00000359276 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
CTPS2-201ENST00000359276 SPRR2GQ9BYE4 73 aa6.55□□□□□ -1.36
CTPS2-201ENST00000359276 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
CTPS2-201ENST00000359276 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.37
CTPS2-201ENST00000359276 RNF213Q63HN8 5207 aa6.43□□□□□ -1.38
CTPS2-201ENST00000359276 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
CTPS2-201ENST00000359276 HERC1Q15751 4861 aa6.39□□□□□ -1.39
CTPS2-201ENST00000359276 MT1FP04733 61 aa6.39□□□□□ -1.39
CTPS2-201ENST00000359276 MT2AP02795 61 aa6.34□□□□□ -1.39
CTPS2-201ENST00000359276 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
CTPS2-201ENST00000359276 BIRC6Q9NR09 4857 aa6.29□□□□□ -1.4
CTPS2-201ENST00000359276 MT1HP80294 61 aa6.29□□□□□ -1.4
CTPS2-201ENST00000359276 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.41
CTPS2-201ENST00000359276 KRTAP10-7P60409 375 aaPredicted RBP6.27□□□□□ -1.41
CTPS2-201ENST00000359276 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
CTPS2-201ENST00000359276 MT1XP80297 61 aa6.24□□□□□ -1.41
CTPS2-201ENST00000359276 MT1BP07438 61 aa6.16□□□□□ -1.42
CTPS2-201ENST00000359276 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
CTPS2-201ENST00000359276 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
CTPS2-201ENST00000359276 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
CTPS2-201ENST00000359276 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
CTPS2-201ENST00000359276 KMT2DO14686 5537 aa6.07□□□□□ -1.44
CTPS2-201ENST00000359276 USH2AO75445 5202 aa5.95□□□□□ -1.46
CTPS2-201ENST00000359276 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
CTPS2-201ENST00000359276 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
CTPS2-201ENST00000359276 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
CTPS2-201ENST00000359276 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
CTPS2-201ENST00000359276 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
CTPS2-201ENST00000359276 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
CTPS2-201ENST00000359276 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.5
CTPS2-201ENST00000359276 LCE2BO14633 110 aa5.63□□□□□ -1.51
CTPS2-201ENST00000359276 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
CTPS2-201ENST00000359276 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
CTPS2-201ENST00000359276 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
CTPS2-201ENST00000359276 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
CTPS2-201ENST00000359276 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
CTPS2-201ENST00000359276 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
CTPS2-201ENST00000359276 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
CTPS2-201ENST00000359276 FCGBPQ9Y6R7 5405 aaPredicted RBP5.46□□□□□ -1.53
CTPS2-201ENST00000359276 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms