RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
SEPSECS-201ENST00000358971 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
SEPSECS-201ENST00000358971 KRTAP10-1P60331 282 aa5.67□□□□□ -1.5
SEPSECS-201ENST00000358971 STARD9Q9P2P6 4700 aa5.66□□□□□ -1.5
SEPSECS-201ENST00000358971 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
SEPSECS-201ENST00000358971 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
SEPSECS-201ENST00000358971 DNAH5Q8TE73 4624 aa5.61□□□□□ -1.51
SEPSECS-201ENST00000358971 PRKDCP78527 4128 aaKnown RBP5.6□□□□□ -1.51
SEPSECS-201ENST00000358971 M0QZ58 72 aa5.58□□□□□ -1.52
SEPSECS-201ENST00000358971 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
SEPSECS-201ENST00000358971 DNHD1Q96M86 4753 aa5.46□□□□□ -1.54
SEPSECS-201ENST00000358971 SMR3BP02814 79 aaPredicted RBP5.45□□□□□ -1.54
SEPSECS-201ENST00000358971 FAT2Q9NYQ8 4349 aa5.45□□□□□ -1.54
SEPSECS-201ENST00000358971 R4GN34 69 aa5.41□□□□□ -1.54
SEPSECS-201ENST00000358971 APOBP04114 4563 aaKnown RBP5.4□□□□□ -1.55
SEPSECS-201ENST00000358971 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
SEPSECS-201ENST00000358971 LCE2BO14633 110 aa5.38□□□□□ -1.55
SEPSECS-201ENST00000358971 PKHD1P08F94 4074 aa5.37□□□□□ -1.55
SEPSECS-201ENST00000358971 PKD1P98161 4303 aa5.36□□□□□ -1.55
SEPSECS-201ENST00000358971 SACSQ9NZJ4 4579 aa5.35□□□□□ -1.55
SEPSECS-201ENST00000358971 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
SEPSECS-201ENST00000358971 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
SEPSECS-201ENST00000358971 HSPG2P98160 4391 aa5.3□□□□□ -1.56
SEPSECS-201ENST00000358971 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
SEPSECS-201ENST00000358971 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
SEPSECS-201ENST00000358971 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
SEPSECS-201ENST00000358971 MYCBP2O75592 4640 aa5.26□□□□□ -1.57
SEPSECS-201ENST00000358971 FAT1Q14517 4588 aa5.25□□□□□ -1.57
SEPSECS-201ENST00000358971 DYNC1H1Q14204 4646 aaKnown RBP5.24□□□□□ -1.57
SEPSECS-201ENST00000358971 HYDINQ4G0P3 5121 aa5.18□□□□□ -1.58
SEPSECS-201ENST00000358971 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
SEPSECS-201ENST00000358971 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
SEPSECS-201ENST00000358971 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
SEPSECS-201ENST00000358971 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
SEPSECS-201ENST00000358971 INE1O15225 51 aa5.11□□□□□ -1.59
SEPSECS-201ENST00000358971 TNP1P09430 55 aa5.06□□□□□ -1.6
SEPSECS-201ENST00000358971 LPAP08519 4548 aa5.06□□□□□ -1.6
SEPSECS-201ENST00000358971 TNXBP22105 4242 aa5.06□□□□□ -1.6
SEPSECS-201ENST00000358971 KRTAP21-3Q3LHN1 58 aa5.01□□□□□ -1.61
SEPSECS-201ENST00000358971 LRP2P98164 4655 aa4.95□□□□□ -1.62
SEPSECS-201ENST00000358971 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
SEPSECS-201ENST00000358971 KMT2CQ8NEZ4 4911 aaKnown RBP4.88□□□□□ -1.63
SEPSECS-201ENST00000358971 Q5VSD8 79 aa4.85□□□□□ -1.63
SEPSECS-201ENST00000358971 A0A1B0GVY2 172 aa4.84□□□□□ -1.64
SEPSECS-201ENST00000358971 RYR3Q15413 4870 aa4.74□□□□□ -1.65
SEPSECS-201ENST00000358971 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
SEPSECS-201ENST00000358971 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
SEPSECS-201ENST00000358971 RYR2Q92736 4967 aa4.68□□□□□ -1.66
SEPSECS-201ENST00000358971 EPPK1P58107 5090 aaKnown RBP4.61□□□□□ -1.67
SEPSECS-201ENST00000358971 RYR1P21817 5038 aa4.6□□□□□ -1.67
SEPSECS-201ENST00000358971 KRTAP4-1Q9BYQ7 146 aa4.59□□□□□ -1.67
SEPSECS-201ENST00000358971 MUC17Q685J3 4493 aa4.59□□□□□ -1.67
SEPSECS-201ENST00000358971 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
SEPSECS-201ENST00000358971 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
SEPSECS-201ENST00000358971 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
SEPSECS-201ENST00000358971 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
SEPSECS-201ENST00000358971 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
SEPSECS-201ENST00000358971 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
SEPSECS-201ENST00000358971 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.7
SEPSECS-201ENST00000358971 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
SEPSECS-201ENST00000358971 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
SEPSECS-201ENST00000358971 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
SEPSECS-201ENST00000358971 HERC1Q15751 4861 aa4.36□□□□□ -1.71
SEPSECS-201ENST00000358971 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
SEPSECS-201ENST00000358971 MUC2Q02817 5179 aa4.34□□□□□ -1.71
SEPSECS-201ENST00000358971 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
SEPSECS-201ENST00000358971 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
SEPSECS-201ENST00000358971 HERC2O95714 4834 aa4.29□□□□□ -1.72
SEPSECS-201ENST00000358971 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
SEPSECS-201ENST00000358971 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
SEPSECS-201ENST00000358971 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
SEPSECS-201ENST00000358971 M0R2T5 61 aa4.18□□□□□ -1.74
SEPSECS-201ENST00000358971 MT1XP80297 61 aa4.13□□□□□ -1.75
SEPSECS-201ENST00000358971 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
SEPSECS-201ENST00000358971 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
SEPSECS-201ENST00000358971 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
SEPSECS-201ENST00000358971 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
SEPSECS-201ENST00000358971 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
SEPSECS-201ENST00000358971 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
SEPSECS-201ENST00000358971 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
SEPSECS-201ENST00000358971 HMCN2Q8NDA2 5059 aa4.07□□□□□ -1.76
SEPSECS-201ENST00000358971 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
SEPSECS-201ENST00000358971 MT1FP04733 61 aa4.04□□□□□ -1.76
SEPSECS-201ENST00000358971 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
SEPSECS-201ENST00000358971 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
SEPSECS-201ENST00000358971 MT1BP07438 61 aa4.01□□□□□ -1.77
SEPSECS-201ENST00000358971 MT2AP02795 61 aa4□□□□□ -1.77
SEPSECS-201ENST00000358971 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
SEPSECS-201ENST00000358971 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
SEPSECS-201ENST00000358971 MT1HP80294 61 aa3.88□□□□□ -1.79
SEPSECS-201ENST00000358971 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
SEPSECS-201ENST00000358971 KMT2DO14686 5537 aa3.85□□□□□ -1.79
SEPSECS-201ENST00000358971 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
SEPSECS-201ENST00000358971 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
SEPSECS-201ENST00000358971 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
SEPSECS-201ENST00000358971 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
SEPSECS-201ENST00000358971 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
SEPSECS-201ENST00000358971 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
SEPSECS-201ENST00000358971 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
SEPSECS-201ENST00000358971 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms