RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
COL4A3BP-202ENST00000357457 MMP24-AS1A0A0U1RRL7 71 aa3.85□□□□□ -1.79
COL4A3BP-202ENST00000357457 SCGB1C2P0DMR2 95 aa3.85□□□□□ -1.79
COL4A3BP-202ENST00000357457 JMJD7-PLA2G4BH0Y9G9 81 aa3.83□□□□□ -1.8
COL4A3BP-202ENST00000357457 PDE6GP18545 87 aa3.83□□□□□ -1.8
COL4A3BP-202ENST00000357457 Q5W150 140 aa3.83□□□□□ -1.8
COL4A3BP-202ENST00000357457 hDV103S1A0JD37 113 aa3.82□□□□□ -1.8
COL4A3BP-202ENST00000357457 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
COL4A3BP-202ENST00000357457 C7orf65Q6ZTY9 151 aa3.82□□□□□ -1.8
COL4A3BP-202ENST00000357457 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
COL4A3BP-202ENST00000357457 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
COL4A3BP-202ENST00000357457 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
COL4A3BP-202ENST00000357457 NREPQ16612 68 aa3.81□□□□□ -1.8
COL4A3BP-202ENST00000357457 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
COL4A3BP-202ENST00000357457 K7EQZ3 153 aa3.78□□□□□ -1.8
COL4A3BP-202ENST00000357457 PYY3Q5JQD4 70 aa3.77□□□□□ -1.81
COL4A3BP-202ENST00000357457 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
COL4A3BP-202ENST00000357457 C14orf132Q9NPU4 83 aa3.77□□□□□ -1.81
COL4A3BP-202ENST00000357457 ATXN8Q156A1 80 aa3.76□□□□□ -1.81
COL4A3BP-202ENST00000357457 UQCR10Q9UDW1 63 aa3.76□□□□□ -1.81
COL4A3BP-202ENST00000357457 MT3P25713 68 aa3.75□□□□□ -1.81
COL4A3BP-202ENST00000357457 KLKP1Q107X0 134 aa3.75□□□□□ -1.81
COL4A3BP-202ENST00000357457 S4R3F8 94 aa3.74□□□□□ -1.81
COL4A3BP-202ENST00000357457 BPY2O14599 106 aa3.73□□□□□ -1.81
COL4A3BP-202ENST00000357457 LCA10Q71F78 164 aa3.73□□□□□ -1.81
COL4A3BP-202ENST00000357457 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
COL4A3BP-202ENST00000357457 CASC2Q6XLA1 102 aa3.7□□□□□ -1.82
COL4A3BP-202ENST00000357457 C1orf64Q8NEQ6 169 aa3.7□□□□□ -1.82
COL4A3BP-202ENST00000357457 CRIPTQ9P021 101 aa3.7□□□□□ -1.82
COL4A3BP-202ENST00000357457 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
COL4A3BP-202ENST00000357457 NAA38Q9BRA0 125 aaKnown RBP3.69□□□□□ -1.82
COL4A3BP-202ENST00000357457 IMUPQ9GZP8 106 aa3.69□□□□□ -1.82
COL4A3BP-202ENST00000357457 SPRR2EP22531 72 aa3.68□□□□□ -1.82
COL4A3BP-202ENST00000357457 SPRR2BP35325 72 aa3.68□□□□□ -1.82
COL4A3BP-202ENST00000357457 SPRR2AP35326 72 aa3.68□□□□□ -1.82
COL4A3BP-202ENST00000357457 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
COL4A3BP-202ENST00000357457 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
COL4A3BP-202ENST00000357457 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
COL4A3BP-202ENST00000357457 Q8N9L7 120 aa3.67□□□□□ -1.82
COL4A3BP-202ENST00000357457 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
COL4A3BP-202ENST00000357457 A8MUN3 132 aa3.65□□□□□ -1.83
COL4A3BP-202ENST00000357457 M0R143 59 aa3.64□□□□□ -1.83
COL4A3BP-202ENST00000357457 H3BT86 120 aa3.63□□□□□ -1.83
COL4A3BP-202ENST00000357457 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
COL4A3BP-202ENST00000357457 K7ERS5 55 aa3.61□□□□□ -1.83
COL4A3BP-202ENST00000357457 MT1XP80297 61 aa3.61□□□□□ -1.83
COL4A3BP-202ENST00000357457 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
COL4A3BP-202ENST00000357457 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
COL4A3BP-202ENST00000357457 A0A087WVE0 104 aa3.59□□□□□ -1.83
COL4A3BP-202ENST00000357457 A0A1B0GV90 55 aa3.59□□□□□ -1.83
COL4A3BP-202ENST00000357457 H0YAA0 97 aa3.59□□□□□ -1.83
COL4A3BP-202ENST00000357457 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
COL4A3BP-202ENST00000357457 TP53AIP1Q9HCN2 124 aa3.58□□□□□ -1.84
COL4A3BP-202ENST00000357457 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
COL4A3BP-202ENST00000357457 SPRR2DP22532 72 aa3.56□□□□□ -1.84
COL4A3BP-202ENST00000357457 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
COL4A3BP-202ENST00000357457 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
COL4A3BP-202ENST00000357457 CYP4F30PQ9H0H9 118 aa3.56□□□□□ -1.84
COL4A3BP-202ENST00000357457 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
COL4A3BP-202ENST00000357457 SPANXA2-OT1Q8N9U9 137 aa3.53□□□□□ -1.84
COL4A3BP-202ENST00000357457 UBL5Q9BZL1 73 aa3.53□□□□□ -1.84
COL4A3BP-202ENST00000357457 A0A1W2PPM0 123 aa3.52□□□□□ -1.85
COL4A3BP-202ENST00000357457 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
COL4A3BP-202ENST00000357457 TAX1BP3O14907 124 aa3.51□□□□□ -1.85
COL4A3BP-202ENST00000357457 NDUFC1O43677 76 aa3.51□□□□□ -1.85
COL4A3BP-202ENST00000357457 HIST1H4AP62805 103 aaKnown RBP3.5□□□□□ -1.85
COL4A3BP-202ENST00000357457 ADM2Q7Z4H4 148 aa3.5□□□□□ -1.85
COL4A3BP-202ENST00000357457 A6NED7 52 aa3.48□□□□□ -1.85
COL4A3BP-202ENST00000357457 LOC101927531A0A1B0GV80 90 aa3.47□□□□□ -1.85
COL4A3BP-202ENST00000357457 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
COL4A3BP-202ENST00000357457 LINC01554Q52M75 96 aa3.46□□□□□ -1.86
COL4A3BP-202ENST00000357457 TRAV22A0A0B4J277 110 aa3.45□□□□□ -1.86
COL4A3BP-202ENST00000357457 K7EP34 96 aa3.45□□□□□ -1.86
COL4A3BP-202ENST00000357457 K7ERU9 68 aa3.45□□□□□ -1.86
COL4A3BP-202ENST00000357457 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
COL4A3BP-202ENST00000357457 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
COL4A3BP-202ENST00000357457 SPCS1Q9Y6A9 102 aa3.44□□□□□ -1.86
COL4A3BP-202ENST00000357457 SMIM6P0DI80 62 aa3.43□□□□□ -1.86
COL4A3BP-202ENST00000357457 ACYP1P07311 99 aa3.42□□□□□ -1.86
COL4A3BP-202ENST00000357457 R4GN34 69 aa3.42□□□□□ -1.86
COL4A3BP-202ENST00000357457 J3QR89 54 aa3.41□□□□□ -1.86
COL4A3BP-202ENST00000357457 P0C880 135 aa3.4□□□□□ -1.87
COL4A3BP-202ENST00000357457 ATOX1O00244 68 aa3.38□□□□□ -1.87
COL4A3BP-202ENST00000357457 UQCRQO14949 82 aa3.38□□□□□ -1.87
COL4A3BP-202ENST00000357457 C20orf197Q8N268 126 aa3.38□□□□□ -1.87
COL4A3BP-202ENST00000357457 M0QZ58 72 aa3.37□□□□□ -1.87
COL4A3BP-202ENST00000357457 H0Y9P7 68 aa3.36□□□□□ -1.87
COL4A3BP-202ENST00000357457 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
COL4A3BP-202ENST00000357457 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
COL4A3BP-202ENST00000357457 H3BPC8 53 aa3.33□□□□□ -1.88
COL4A3BP-202ENST00000357457 A0A1B0GU33 70 aa3.3□□□□□ -1.88
COL4A3BP-202ENST00000357457 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
COL4A3BP-202ENST00000357457 LINC00208Q96KT6 92 aa3.3□□□□□ -1.88
COL4A3BP-202ENST00000357457 F8W1H4 67 aa3.29□□□□□ -1.88
COL4A3BP-202ENST00000357457 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
COL4A3BP-202ENST00000357457 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
COL4A3BP-202ENST00000357457 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
COL4A3BP-202ENST00000357457 ATP5EP2Q5VTU8 51 aa3.27□□□□□ -1.89
COL4A3BP-202ENST00000357457 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
COL4A3BP-202ENST00000357457 GTF2H5Q6ZYL4 71 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms