RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 H0YAA0 97 aa8.21□□□□□ -1.1
PTBP1-203ENST00000356948 TNXBP22105 4242 aa8.19□□□□□ -1.1
PTBP1-203ENST00000356948 A0A1B0GVY2 172 aa8.18□□□□□ -1.1
PTBP1-203ENST00000356948 LPAP08519 4548 aa8.18□□□□□ -1.1
PTBP1-203ENST00000356948 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
PTBP1-203ENST00000356948 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
PTBP1-203ENST00000356948 KIAA1109Q2LD37 5005 aa8.1□□□□□ -1.11
PTBP1-203ENST00000356948 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.11
PTBP1-203ENST00000356948 H1FX-AS1Q4G0G2 97 aa8.09□□□□□ -1.12
PTBP1-203ENST00000356948 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
PTBP1-203ENST00000356948 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
PTBP1-203ENST00000356948 P0C880 135 aa8.02□□□□□ -1.13
PTBP1-203ENST00000356948 LRP2P98164 4655 aa7.98□□□□□ -1.13
PTBP1-203ENST00000356948 RYR1P21817 5038 aa7.97□□□□□ -1.13
PTBP1-203ENST00000356948 COX6B2Q6YFQ2 88 aa7.97□□□□□ -1.13
PTBP1-203ENST00000356948 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
PTBP1-203ENST00000356948 EPPK1P58107 5090 aaKnown RBP7.93□□□□□ -1.14
PTBP1-203ENST00000356948 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
PTBP1-203ENST00000356948 RPL37P61927 97 aaKnown RBP7.91□□□□□ -1.14
PTBP1-203ENST00000356948 Q5VSD8 79 aa7.89□□□□□ -1.15
PTBP1-203ENST00000356948 KRTAP21-3Q3LHN1 58 aa7.85□□□□□ -1.15
PTBP1-203ENST00000356948 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
PTBP1-203ENST00000356948 KRTAP13-4Q3LI77 160 aa7.81□□□□□ -1.16
PTBP1-203ENST00000356948 XP32Q5T750 250 aa7.81□□□□□ -1.16
PTBP1-203ENST00000356948 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
PTBP1-203ENST00000356948 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
PTBP1-203ENST00000356948 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
PTBP1-203ENST00000356948 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
PTBP1-203ENST00000356948 MT1HL1P0DM35 61 aa7.7□□□□□ -1.18
PTBP1-203ENST00000356948 S4R3F8 94 aa7.64□□□□□ -1.19
PTBP1-203ENST00000356948 MUC2Q02817 5179 aa7.63□□□□□ -1.19
PTBP1-203ENST00000356948 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
PTBP1-203ENST00000356948 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
PTBP1-203ENST00000356948 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
PTBP1-203ENST00000356948 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
PTBP1-203ENST00000356948 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
PTBP1-203ENST00000356948 HERC2O95714 4834 aa7.39□□□□□ -1.23
PTBP1-203ENST00000356948 J3QL48 77 aa7.37□□□□□ -1.23
PTBP1-203ENST00000356948 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
PTBP1-203ENST00000356948 M0QZ58 72 aa7.35□□□□□ -1.23
PTBP1-203ENST00000356948 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.24
PTBP1-203ENST00000356948 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
PTBP1-203ENST00000356948 R4GN34 69 aa7.32□□□□□ -1.24
PTBP1-203ENST00000356948 PLAC4Q8WY50 150 aa7.28□□□□□ -1.24
PTBP1-203ENST00000356948 HERC1Q15751 4861 aa7.26□□□□□ -1.25
PTBP1-203ENST00000356948 FAT4Q6V0I7 4981 aa7.22□□□□□ -1.25
PTBP1-203ENST00000356948 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
PTBP1-203ENST00000356948 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
PTBP1-203ENST00000356948 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
PTBP1-203ENST00000356948 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
PTBP1-203ENST00000356948 SEC61BP60468 96 aaKnown RBP7.03□□□□□ -1.28
PTBP1-203ENST00000356948 FLGP20930 4061 aaPredicted RBP6.97□□□□□ -1.29
PTBP1-203ENST00000356948 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
PTBP1-203ENST00000356948 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
PTBP1-203ENST00000356948 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.31
PTBP1-203ENST00000356948 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
PTBP1-203ENST00000356948 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
PTBP1-203ENST00000356948 TNP1P09430 55 aa6.65□□□□□ -1.34
PTBP1-203ENST00000356948 M0R2T5 61 aa6.52□□□□□ -1.37
PTBP1-203ENST00000356948 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
PTBP1-203ENST00000356948 MT1HP80294 61 aa6.45□□□□□ -1.38
PTBP1-203ENST00000356948 MT1FP04733 61 aa6.42□□□□□ -1.38
PTBP1-203ENST00000356948 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
PTBP1-203ENST00000356948 USH2AO75445 5202 aa6.37□□□□□ -1.39
PTBP1-203ENST00000356948 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
PTBP1-203ENST00000356948 MT2AP02795 61 aa6.35□□□□□ -1.39
PTBP1-203ENST00000356948 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
PTBP1-203ENST00000356948 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
PTBP1-203ENST00000356948 KMT2DO14686 5537 aa6.24□□□□□ -1.41
PTBP1-203ENST00000356948 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
PTBP1-203ENST00000356948 MT1BP07438 61 aa6.15□□□□□ -1.42
PTBP1-203ENST00000356948 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
PTBP1-203ENST00000356948 MT1XP80297 61 aa6.12□□□□□ -1.43
PTBP1-203ENST00000356948 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
PTBP1-203ENST00000356948 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
PTBP1-203ENST00000356948 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
PTBP1-203ENST00000356948 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
PTBP1-203ENST00000356948 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
PTBP1-203ENST00000356948 INE1O15225 51 aa5.99□□□□□ -1.45
PTBP1-203ENST00000356948 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
PTBP1-203ENST00000356948 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
PTBP1-203ENST00000356948 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
PTBP1-203ENST00000356948 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
PTBP1-203ENST00000356948 LCE2BO14633 110 aa5.88□□□□□ -1.47
PTBP1-203ENST00000356948 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
PTBP1-203ENST00000356948 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
PTBP1-203ENST00000356948 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
PTBP1-203ENST00000356948 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
PTBP1-203ENST00000356948 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
PTBP1-203ENST00000356948 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
PTBP1-203ENST00000356948 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
PTBP1-203ENST00000356948 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
PTBP1-203ENST00000356948 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
PTBP1-203ENST00000356948 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
PTBP1-203ENST00000356948 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
PTBP1-203ENST00000356948 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
PTBP1-203ENST00000356948 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
PTBP1-203ENST00000356948 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
PTBP1-203ENST00000356948 MT1LQ93083 61 aa5.25□□□□□ -1.57
PTBP1-203ENST00000356948 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms